nsv3885667
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:324,759
- Description:GRCh37/hg19 4q26(chr4:115565977-115890735)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 871 SVs from 77 studies. See in: genome view
Overlapping variant regions from other studies: 871 SVs from 77 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv3885667 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 114,644,821 | 114,969,579 |
| nsv3885667 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 115,565,977 | 115,890,735 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15153624 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV000682447.1, VCV000562958.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15153624 | Remapped | Perfect | NC_000004.12:g.(?_ 114644821)_(114969 579_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 114,644,821 | 114,969,579 |
| nssv15153624 | Submitted genomic | NC_000004.11:g.(?_ 115565977)_(115890 735_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 115,565,977 | 115,890,735 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv15153624 | GRCh37: NC_000004.11:g.(?_115565977)_(115890735_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV000682447.1, VCV000562958.1 | 3 |