nsv3877482
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:792,587
- Description:GRCh37/hg19 1p13.2(chr1:114011163-114803749)x3 AND See cases
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1774 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 1774 SVs from 80 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv3877482 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 113,468,541 | 114,261,127 |
nsv3877482 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 114,011,163 | 114,803,749 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15152126 | copy number gain | Multiple | Multiple | See cases | Uncertain significance | ClinVar | RCV000512362.2, VCV000441879.2 | 3 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv15152126 | Remapped | Perfect | NC_000001.11:g.(?_ 113468541)_(114261 127_?)dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 113,468,541 | 114,261,127 |
nssv15152126 | Submitted genomic | NC_000001.10:g.(?_ 114011163)_(114803 749_?)dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 114,011,163 | 114,803,749 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
---|---|---|---|---|---|---|---|---|
nssv15152126 | GRCh37: NC_000001.10:g.(?_114011163)_(114803749_?)dup | copy number gain | not provided | See cases | Uncertain significance | ClinVar | RCV000512362.2, VCV000441879.2 | 3 |