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dbVar

Database of genomic structural variation

esv2632239

Organism: Homo sapiens

Study:estd197 (McKernan et al. 2009)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:originalFile=Yoruban_small_indel.gff
Publication(s):McKernan et al. 2009

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Remapped(Score: Perfect):2,709-2,709

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv2632239	Remapped	Perfect	GRCh38.p12	non-nuclear	First Pass	NC_012920.1	ChrMT	2,709	2,709
esv2632239	Remapped	Perfect	GRCh37.p13	non-nuclear	First Pass	NC_012920.1	ChrMT	2,709	2,709
esv2632239	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_001807.4	ChrMT	2,711	2,711

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv5262603	insertion	NA18507	Sequencing	Split read mapping	232,775

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv5262603	Remapped	Perfect	NC_012920.1:g.2709 _2710ins?	GRCh38.p12	First Pass	NC_012920.1	ChrMT	2,709	2,709
essv5262603	Remapped	Perfect	NC_012920.1:g.2709 _2710ins?	GRCh37.p13	First Pass	NC_012920.1	ChrMT	2,709	2,709
essv5262603	Submitted genomic		NC_001807.4:g.2711 _2712ins?	NCBI36 (hg18)		NC_001807.4	ChrMT	2,711	2,711

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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