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NM_000517.6(HBA2):c.77G>A (p.Gly26Asp) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Aug 3, 2023
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003331716.1

Allele description [Variation Report for NM_000517.6(HBA2):c.77G>A (p.Gly26Asp)]

NM_000517.6(HBA2):c.77G>A (p.Gly26Asp)

Genes:
LOC106804612:hemoglobin subunit alpha 2 recombination region [Gene]
HBA2:hemoglobin subunit alpha 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16p13.3
Genomic location:
Preferred name:
NM_000517.6(HBA2):c.77G>A (p.Gly26Asp)
HGVS:
  • NC_000016.10:g.172989G>A
  • NG_000006.1:g.33852G>A
  • NG_046165.1:g.2728G>A
  • NG_059186.1:g.1339G>A
  • NG_059271.1:g.5143G>A
  • NM_000517.6:c.77G>AMANE SELECT
  • NP_000508.1:p.Gly26Asp
  • LRG_1240t1:c.77G>A
  • LRG_1225:g.1339G>A
  • LRG_1240:g.5143G>A
  • LRG_1240p1:p.Gly26Asp
  • NC_000016.9:g.222988G>A
  • NM_000517.4:c.77G>A
Protein change:
G26D
Molecular consequence:
  • NM_000517.6:c.77G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV004039175Women's Health and Genetics/Laboratory Corporation of America, LabCorp
criteria provided, single submitter

(LabCorp Variant Classification Summary - May 2015)
Uncertain significance
(Aug 3, 2023)
germlineclinical testing

PubMed (2)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Mutations on the α2-Globin Gene That May Trigger α(+)-Thalassemia.

Farashi S, Vakili S, Garous NF, Ashki M, Imanian H, Azarkeivan A, Najmabadi H.

Hemoglobin. 2015;39(6):398-402. doi: 10.3109/03630269.2015.1075890. Epub 2015 Sep 2.

PubMed [citation]
PMID:
26329872

Hb Cibeles [α2 CD25(B6) (Gly → Asp)]: a novel alpha chain variant causing alpha-thalassemia.

de la Fuente-Gonzalo F, Nieto JM, Vinuesa L, Sevilla J, Díaz-Mediavilla J, Villegas A, González FA, Ropero P.

Int J Hematol. 2014 Dec;100(6):599-601. doi: 10.1007/s12185-014-1663-2. Epub 2014 Sep 12.

PubMed [citation]
PMID:
25212678

Details of each submission

From Women's Health and Genetics/Laboratory Corporation of America, LabCorp, SCV004039175.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (2)

Description

Variant summary: HBA2 c.77G>A (p.Gly26Asp), also referred to as Hb Cibeles, results in a non-conservative amino acid change located in the globin domain (IPR000971) of the encoded protein sequence. Four of five in-silico tools predict a damaging effect of the variant on protein function. The variant was absent in 53842 control chromosomes (gnomAD). The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. c.77G>A has been reported in the literature in at least two heterozygous individuals with mild/moderate microcytic hypochromic anemia with normal Hb A2 levels (e.g. de la Fuente-Gonzalo_2014, Farashi_2015). These reports do not provide unequivocal conclusions about association of the variant with Alpha Thalassemia. To our knowledge, no experimental evidence demonstrating an impact on protein function has been reported, although it has been suggested that this variant is unstable as it was not detected by electrophoretic or chromatographic methods (de la Fuente-Gonzalo_2014). The following publications have been ascertained in the context of this evaluation (PMID: 26329872, 25212678). No submitters have cited clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as uncertain significance.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 1, 2024