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NM_000527.5(LDLR):c.1132C>T (p.Gln378Ter) AND Hypercholesterolemia, familial, 1

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 25, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000237214.1

Allele description [Variation Report for NM_000527.5(LDLR):c.1132C>T (p.Gln378Ter)]

NM_000527.5(LDLR):c.1132C>T (p.Gln378Ter)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.1132C>T (p.Gln378Ter)
HGVS:
  • NC_000019.10:g.11111585C>T
  • NG_009060.1:g.27205C>T
  • NM_000527.5:c.1132C>TMANE SELECT
  • NM_001195798.2:c.1132C>T
  • NM_001195799.2:c.1009C>T
  • NM_001195800.2:c.628C>T
  • NM_001195803.2:c.751C>T
  • NP_000518.1:p.Gln378Ter
  • NP_001182727.1:p.Gln378Ter
  • NP_001182728.1:p.Gln337Ter
  • NP_001182729.1:p.Gln210Ter
  • NP_001182732.1:p.Gln251Ter
  • LRG_274:g.27205C>T
  • NC_000019.9:g.11222261C>T
  • c.1132C>T
Protein change:
Q210*
Links:
LDLR-LOVD, British Heart Foundation: LDLR_000727; dbSNP: rs879254802
NCBI 1000 Genomes Browser:
rs879254802
Molecular consequence:
  • NM_000527.5:c.1132C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001195798.2:c.1132C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001195799.2:c.1009C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001195800.2:c.628C>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001195803.2:c.751C>T - nonsense - [Sequence Ontology: SO:0001587]

Condition(s)

Name:
Hypercholesterolemia, familial, 1
Synonyms:
LDL RECEPTOR DISORDER; Hyperlipoproteinemia Type IIa; HYPER-LOW-DENSITY-LIPOPROTEINEMIA; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0007750; MedGen: C0745103; Orphanet: 391665; OMIM: 143890

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000295239LDLR-LOVD, British Heart Foundation
criteria provided, single submitter

(ACGS Guidelines, 2013)
Pathogenic
(Mar 25, 2016)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes2not providednot provided2not providedliterature only

Citations

PubMed

Low-density lipoprotein receptor gene mutations in a Southeast Asian population with familial hypercholesterolemia.

Khoo KL, van Acker P, Defesche JC, Tan H, van de Kerkhof L, Heijnen-van Eijk SJ, Kastelein JJ, Deslypere JP.

Clin Genet. 2000 Aug;58(2):98-105.

PubMed [citation]
PMID:
11005141

Genetic diagnosis of familial hypercholesterolemia using a DNA-array based platform.

Alonso R, Defesche JC, Tejedor D, Castillo S, Stef M, Mata N, Gomez-Enterria P, Martinez-Faedo C, Forga L, Mata P.

Clin Biochem. 2009 Jun;42(9):899-903. doi: 10.1016/j.clinbiochem.2009.01.017. Epub 2009 Feb 6.

PubMed [citation]
PMID:
19318025

Details of each submission

From LDLR-LOVD, British Heart Foundation, SCV000295239.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedliterature only PubMed (2)
2not provided1not providednot providedliterature only PubMed (2)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided
2germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Sep 1, 2024