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NC_000023.11:g.30304157_30306387delinsTGGAAATTATATATATTTCCAAATAAA AND Congenital adrenal hypoplasia, X-linked

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Sep 1, 2002
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000011721.6

Allele description [Variation Report for NC_000023.11:g.30304157_30306387delinsTGGAAATTATATATATTTCCAAATAAA]

NC_000023.11:g.30304157_30306387delinsTGGAAATTATATATATTTCCAAATAAA

Gene:
NR0B1:nuclear receptor subfamily 0 group B member 1 [Gene - OMIM - HGNC]
Variant type:
Indel
Cytogenetic location:
Xp21.2
Genomic location:
Preferred name:
NC_000023.11:g.30304157_30306387delinsTGGAAATTATATATATTTCCAAATAAA
HGVS:
  • NC_000023.11:g.30304157_30306387delinsTGGAAATTATATATATTTCCAAATAAA
  • NG_009814.1:g.7992_10222delinsTTTATTTGGAAATATATATAATTTCCA
  • LRG_858:g.7992_10222delinsTTTATTTGGAAATATATATAATTTCCA
  • NC_000023.10:g.30322274_30324504delinsTGGAAATTATATATATTTCCAAATAAA
  • U31929.1:g.4562_6800delinsTTTATTTGGAAATATATATAATTTCCA
Note:
NCBI staff provided an HGVS expression for allelic variant 300473.0026 from locations relative to GenBank U31929.1 and sequence reported in Figure 2 of the paper by Salvi et al.,2022 (PubMed 12213854). It was not clear whether the locations were retained or deleted; they were treated as retained, i.e. the positions of the breakpoints.
Links:
OMIM: 300473.0026

Condition(s)

Name:
Congenital adrenal hypoplasia, X-linked (AHC)
Synonyms:
ADRENAL HYPOPLASIA, CONGENITAL, WITH HYPOGONADOTROPIC HYPOGONADISM; X-linked AHC; Adrenal hypoplasia, congenital; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0010264; MedGen: C0342482; OMIM: 300200

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000031953OMIM
no assertion criteria provided
Pathogenic
(Sep 1, 2002)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Progressive onset of adrenal insufficiency and hypogonadism of pituitary origin caused by a complex genetic rearrangement within DAX-1.

Salvi R, Gomez F, Fiaux M, Schorderet D, Jameson JL, Achermann JC, Gaillard RC, Pralong FP.

J Clin Endocrinol Metab. 2002 Sep;87(9):4094-100.

PubMed [citation]
PMID:
12213854

Details of each submission

From OMIM, SCV000031953.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

Salvi et al. (2002) reported a patient who was diagnosed with adrenal failure (AHC; 300200) at 6 weeks of age, but who experienced transient recovery of adrenal function of several months' duration later in infancy. He subsequently failed to undergo puberty because of hypogonadotropic hypogonadism of pituitary origin, and he was also diagnosed with schizophrenia in early adulthood. Molecular genetic analyses revealed a complex rearrangement in DAX1, including a 2.2-kb deletion spanning the entire second exon and a small 27-bp insertion. The deletion extended from position 4561 through position 6801, completely eliminating exon 2 of the gene. The putative protein encoded by this mutated gene is 429 amino acids long. The initial 389 residues probably correspond to the wildtype DAX1 sequence, whereas the last 40 amino acids are presumably completely unrelated, being transcribed from the intronic sequence adjacent to exon 1. In vitro functional analyses confirmed the absence of repressor activity exerted by the mutant protein.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 7, 2023