1ICN,1KZW,1DC9,2MO5


Conserved Protein Domain Family
FABP2

?
cd19445: FABP2 
fatty acid-binding protein 2
FABP2 (also known as fatty acid-binding protein 2, intestinal, and I-FABP) is a small cytosolic protein abundantly present in mature enterocytes of small and large intestine and responsible for the absorption and intracellular transport of fatty acids. It is present throughout the small intestine; its highest expression is in the jejunum. It is a sensitive marker for damage to the intestinal epithelium. This subgroup belongs to the intracellular fatty acid-binding protein (FABP) family, members of which are small proteins that bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development.
Statistics
?
PSSM-Id: 381220
Aligned: 7 rows
Threshold Bit Score: 232.448
Created: 22-Jun-2006
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
ligand binding
Conserved site includes 30 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding cavity [chemical binding site]
Evidence:
  • Comment:based on FABP2 and on other cytosolic fatty acid-binding protein family members with structure
  • Comment:ligand is bound within the beta-barrel in a central internal water-filled cavity lined with polar and hydrophobic amino acids
  • Structure:1ICN; Rattus norvegicus I-FABP with bound oleic acid, contacts 4A
  • Citation:PMID 8253762

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1         #           #  ##  # #   ##  #    # # #      # # #      # # #       # #        
1ICN_A         1 AFDGTWKVDRNENYEKFMEKMGINVVKRKLGAHDNLKLTITQEGNKFTVKESSNFRNIDVVFELGVDFAYSLADGTELTG 80  Norway rat
AAP93851       2 TFNGTWKVDRNENYEKFMEQMGVNMVKRKLAAHDNLKITLEQTGDKFNVKEVSTFRTLEINFTLGVTFDYSLADGTELTG 81  zebrafish
NP_001007924   2 AFNGTWKIEKNENYEKFMEAMGVNVMKRKLGAHDNLKLTIQQDGNKFLVKESSNFRTIDIEFTLGVSFEYSLADGTELSG 81  chicken
1KZW_A         1 XFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRNIEVVFELGVTFNYNLADGTELRG 80  human
1DC9_A         1 AFDGTWKVDRNENYEKFMEKMGINVVKRKLGAHDNLKLTITQEGNKFTVKESSNFRNIDNVFELGVDFAYSLADGTELTG 80  Norway rat
2MO5_A        12 AFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRNIEVVFELGVTFNYNLADGTELRG 91  human
Q91775         2 AFDGTWKVDRSENYEKFMEVMGVNIVKRKLGAHDNLKVIIQQDGNNFTVKESSTFRNIEIKFTLAQPFEYSLADGTELNG 81  African clawed ...
Feature 1         #      # #            # #      # # #        # #  
1ICN_A        81 TWTMEGNKLVGKFKRVDNGKELIAVQEISGNELIQTYTYEGVEAKRIFKK 130 Norway rat
AAP93851      82 SWVIEGDTLKGTFTRKDNGKVLTTVRTIVNGELVQSYSYDGVEAKRIFKR 131 zebrafish
NP_001007924  82 SWNLEGNKLVGTFTRKDNGKVLTAYREIVGSELIQTYVYEGVEAKRIFKK 131 chicken
1KZW_A        81 TWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTYVYEGVEAKRIFKK 130 human
1DC9_A        81 TWTMEGNKLVGKFKRVDNGKELIAVREISGNELIQTYTYEGVEAKRIFKK 130 Norway rat
2MO5_A        92 TWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTYVYEGVEAKRIFKK 141 human
Q91775        82 AWFLQDNQLLGTFTRKDNGKVLQTTRQIIGDELVQTYEYEGTESKRIFKR 131 African clawed frog

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap