3QO4,3U3P


Conserved Protein Domain Family
TNFRSF21

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cd10583: TNFRSF21 
Click on image for an interactive view with Cn3D
Tumor necrosis factor receptor superfamily member 21 (TNFRSF21), also known as death receptor (DR6)
TNFRSF21 (also known as death receptor 6 (DR6), CD358, BM-018) is highly expressed in differentiating neurons as well as in the adult brain, and is upregulated in injured neurons. DR6 negatively regulates neurondendrocyte, axondendrocyte, and oligodendrocyte survival, hinders axondendrocyte and oligodendrocyte regeneration and its inhibition has a neuro-protective effect in nerve injury. It activates nuclear factor kappa-B (NFkB) and mitogen-activated protein kinase 8 (MAPK8, also called c-Jun N-terminal kinase 1), and induces cell apoptosis by associating with TNFRSF1A-associated via death domain (TRADD), which is known to mediate signal transduction of tumor necrosis factor receptors. TNFRSF21 plays a role in T-helper cell activation, and may be involved in inflammation and immune regulation. Its possible ligand is alpha-amyloid precursor protein (APP), hence probably involved in the development of Alzheimer's disease; when released, APP binds in an autocrine/paracrine manner to activate a caspase-dependent self-destruction program that removes unnecessary or connectionless axons. Increasing beta-catenin levels in brain endothelium upregulates TNFRSF21 and TNFRSF19, indicating that these death receptors are downstream target genes of Wnt/beta-catenin signaling, which has been shown to be required for blood-brain barrier development. DR6 is up-regulated in numerous solid tumors as well as in tumor vascular cells, including ovarian cancer and may be a clinically useful diagnostic and predictive serum biomarker for some adult sarcoma subtypes.
Statistics
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PSSM-Id: 276909
Aligned: 10 rows
Threshold Bit Score: 266.617
Created: 13-Jun-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:CRD1 [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      ###############  #####                                            
3QO4_A        16 TYRHVDRATGQVLTCDKCPAGTYVSEHCTntSLRVCSSCPVgTFTRHENGIEKCHDCsQPCPwPMIEKLPCAALTDRECT 95  human
3U3P_A        12 TYRHVDRATGQVLTCDKCPAGTYVSEHCTntSLRVCSSCPVgTFTRHENGIEKCHDCsQPCPwPMIEKLPCAALTDRECT 91  human
AAK29666      38 KYLHLDRATNQELICDKCPAGTYVSKHCTksTLRECSPCPDgTFTKHENGIERCHPCrKPCElPMIEKTHCTALTDRECT 117 chicken
CAG13004      40 QYRHVDADSGTQLVCDKCPAGTFVSLHCSplLVRECSPCPNgTFTRGENGVEQCHRCrPPCPaGLVEKLPCTTTQDRVCT 119 spotted green p...
Q5TYN2        40 HYHHIDPATGNKLVCDKCPAGTYVSSHCTeaSVRECSPCPDgTFTRGENGVQQCHRCqRRCQaPFIEKTPCTSTTDRLCV 119 zebrafish
NP_001072604  55 KYQHSDPTSKINLICDKCPAGTHVSKHCTesALRECSPCPNgTFTKHENGNDRCHPCrAPCQpPLVEKMPCTALSDRECS 134 western clawed ...
XP_002189522  25 KYRHLDRATNEELTCDKCPAGTYVSKHCTksTLRECSPCPDgTFTKHENGIERCHPCrNPCElPMIEKTHCTALTDRECT 104 zebra finch
XP_007897491  45 KYRHRNPATGTKIYCDKCPAGTHVSKHCTstSLRECTPCKNgTFTRHENGIDQCHNCsKPCVaPMMEESSCIAFSDRVCI 124 elephant shark
ETE67859      48 TYAHHDRATNTHLTCHKCPAGTYVSKHCTmmTLRECSSCANgTFTKHENGIEECHSCrKPCEqSMIEKTPCTARTDRECS 127 king cobra
CDQ56841      42 HYYHTDPSTGIQLICDKCPAGTFVSRHCTqtSVRDCRRCDEdTFTHGENGIQHCHHCrRPCHaPLVEKVPCTATSDRICT 121 rainbow trout
Feature 1                                                                                        
3QO4_A        96 CPPGMFqs---naTCAPHTVCpvGWGVRKKGTETEDVRCKQCaRGTFSDvps---------------------------- 144 human
3U3P_A        92 CPPGMFqs---naTCAPHTVCpvGWGVRKKGTETEDVRCKQCaRGTFSDvps---------------------------- 140 human
AAK29666     118 CLSGTFqi---ndTCVPYTVCpvGWGVRKKGTETEDVRCKPClRGTFSDvps---------------------------- 166 chicken
CAG13004     120 CPTNSFlprdggtQCKAHSLCppGTRMKKRGGETEDVVCKPCsKGTFSSeeshsmsikrssrvlkkgpmqdpssimekai 199 spotted green p...
Q5TYN2       120 CPPGSFsq---dgKCQRHSSClpGWGVRKRGSETEDVRCQPCqRGTFSAits---------------------------- 168 zebrafish
NP_001072604 135 CPPGTFll---ndTCAPYSSCpvGWGVRKKGSEAENVKCKVCpRGTFSDvps---------------------------- 183 western clawed ...
XP_002189522 105 CLSGTFqt---ndTCVPYTVCrvGWGVRKKGTETEDVRCKPCpRGTFSDvps---------------------------- 153 zebra finch
XP_007897491 125 CPPRKFls---nnTCVRHTACaiGSGVRKKGTPTEDVKCKLCpHGTFSNvss---------------------------- 173 elephant shark
ETE67859     128 CPPGKFlh---gdTCIPYKVCpiGWGLRKKGTETDDIRCKPCpPGTFSAvps---------------------------- 176 king cobra
CDQ56841     122 CPPDTFtq---gdSCTAHSLCpvGSGVKKRGNDVEDVRCKVCaRGSFSDmas---------------------------- 170 rainbow trout
Feature 1                                                   
3QO4_A       145 ----------svmKCKAYTDClsqnl---vvikPGTKETDNVC 174 human
3U3P_A       141 ----------svmKCKAYTDClsqnl---vvikPGTKETDNVC 170 human
AAK29666     167 ----------svmKCKTYTDCfgknm---vvvkPGTKESDNVC 196 chicken
CAG13004     200 qkkpvvpptqvkeKWIYYSNGqgvdilklvaaqVGTQWIDVYQ 242 spotted green pufferfish
Q5TYN2       169 ----------dslRCQTHTDCpalgl---tlliKGTKKTDNVC 198 zebrafish
NP_001072604 184 ----------svlKCKAHTDCaelgl---alikPGTTEQDNVC 213 western clawed frog
XP_002189522 154 ----------svmKCKPYTDCfaknm---vvikPGTKESDNVC 183 zebra finch
XP_007897491 174 ----------pllKCAVLTNCselgk---vvlvPGNRERNNVC 203 elephant shark
ETE67859     177 ----------svlKCKHFTNCsqlnm---mvikPGTKMTDNIC 206 king cobra
CDQ56841     171 ----------svlRCRTHTDClthgl---pllaTGTRETDNIC 200 rainbow trout

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