2PQH,3THK


Conserved Protein Domain Family
SH3_Alpha_Spectrin

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cd11808: SH3_Alpha_Spectrin 
Click on image for an interactive view with Cn3D
Src homology 3 domain of Alpha Spectrin
Spectrin is a major structural component of the red blood cell membrane skeleton and is important in erythropoiesis and membrane biogenesis. It is a flexible, rope-like molecule composed of two subunits, alpha and beta, which consist of many spectrin-type repeats. Alpha and beta spectrin associate to form heterodimers and tetramers; spectrin tetramer formation is critical for red cell shape and deformability. Defects in alpha spectrin have been associated with inherited hemolytic anemias including hereditary spherocytosis (HSp), hereditary elliptocytosis (HE), and hereditary pyropoikilocytosis (HPP). Alpha spectrin contains a middle SH3 domain and a C-terminal EF-hand binding motif in addition to multiple spectrin repeats. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212742
Aligned: 13 rows
Threshold Bit Score: 91.3925
Created: 31-May-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Structure:3THK; Rattus norvegicus alpha spectrin SH3 domain binds fused proline-rich ligand; contacts at 4A.
  • Structure:2PQH; Gallus gallus alpha spectrin SH3 domain binds to a fused proline-rich peptide; contacts at 4A.
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #                     ##             # ##   
2PQH_A          4 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVND-RQGFVPAAYVKK 56   chicken
3THK_A          7 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVND-RQGFVPAAYVKK 59   Norway rat
P13395        974 CVVALYDYTEKSPREVSMKKGDVLTLLNSNNKDWWKVEVND-RQGFVPAAYIKK 1026 fruit fly
NP_001091958  971 LVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVND-RQGFVPAAYVKK 1023 zebrafish
NP_508537     987 CVLALYDYQEKSPREVSMKKGDVLTLLNASNRDWWKVEVND-RQGFVPAAYVKR 1039 nematode
AAA30008      137 YVVALYDYMEKSPREVSMKKGDVLVLLNSSNKDWWKVEVND-RQGFVPAAYVKK 189  green sea urchin
XP_002433506  930 FVMALYDYTEKSPREVSMKKNDVLTLLNSNNKDWWKVEVND-RQGFVPAAYVKK 982  black-legged tick
XP_002579884 1402 VVMALYDYQEKSPREVSMRKGEILTLLASNHKDWWKVEVND-RQGFVPAAYVKK 1454 Schistosoma mansoni
XP_001619484    7 CVVALYDYQEKTAREVSMKKGDILTLLNSTNKDWWKVETND-RQGFVPAAYVKR 59   starlet sea anemone
EFX88672      977 CVVALYDYTEKSPREVSMRKGDVLTLLNSNNKDWWKVEVND-RQGFVPAAYVKK 1029 common water flea
XP_002120070  605 KVVILHEYRQKSPRELSVKKGEVLTVVSSYNKDWWKLENEE-QQGFVPASILKR 657  Ciona intestinalis
XP_002169148   78 VVEVIQNYDEKNPHEISIEKGQILTLLNSSNREWWKVESDD-RQGFVPKECLQK 130  green hydra
XP_003389115  981 YVKAVYSYGAHSAREVSVKKGEILALINSSNKEWWKVETSGgKQGFLPANYVKK 1034 Amphimedon queenslandica

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