1RPM


Conserved Protein Domain Family
R-PTPc-M-1

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cd14633: R-PTPc-M-1 
Click on image for an interactive view with Cn3D
catalytic domain of receptor-type tyrosine-protein phosphatase M, repeat 1
Receptor-type tyrosine-protein phosphatase M (PTPRM), also known as protein-tyrosine phosphatase mu (R-PTP-mu or PTPmu), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRM/PTPmu is a homophilic cell adhesion molecule expressed in CNS neurons and glia. It is required for E-, N-, and R-cadherin-dependent neurite outgrowth. Loss of PTPmu contributes to tumor cell migration and dispersal of human glioblastomas. PTPRM contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the first (repeat 1) PTP domain.
Statistics
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PSSM-Id: 350481
Aligned: 5 rows
Threshold Bit Score: 563.127
Created: 14-Oct-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
catalytic siteactive site
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1: catalytic site [active site], 2 residue positions
Conserved feature residue pattern:C RClick to see conserved feature residue pattern help
Evidence:
  • Comment:the catalytic cysteine initiates a nucleophilic attack on the phosphate group of the substrate, forming a transient phosphoenzyme intermediate and releasing the substrate dephosphorylated; the transition state is stabilized by the arginine present in the catalytic pocket

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
1RPM_A          6 DLLQHITQMKCaegYGFKEEYESFFEGQSapWDSAKKDENRmknrygNIIAYDhSRVRLQTIEGDTNSDYINGNYIDGyH 85   human
KFP64904      162 DLLQHITQMKCaegYGFKEEYESFFEGQSapWDSAKKDENRmknrygNIIAYDhSRVRLQPIEGETSSDYINGNYIDGyH 241  red-legged se...
XP_017950524  954 DLLQHITQMKCaegYGFKEEYETFFEGQSapWESAKKDENRmknrygNIIAYDhSRVRLQSIEDEASSDYINGNYVDGyH 1033 tropical claw...
KPP77246      145 DLLQHITQMKCaegYGFKEEYESFFEGQSapWDSAKKDENRmknrygNIIAYDhSRVRLQPLEGEQGSDYINANYIDGyH 224  Asian bonytongue
P28827        884 DLLQHITQMKCaegYGFKEEYESFFEGQSapWDSAKKDENRmknrygNIIAYDhSRVRLQTIEGDTNSDYINGNYIDGyH 963  human
Feature 1                                                                                         
1RPM_A         86 RPNHYIATQGPmqetIYDFWRMVWHEntASIIMVTNLvevgrVKCCKYWPDDTEIYKDIKVTLIETELLaeYVIRTFAVE 165  human
KFP64904      242 RPNHYIATQGPmqetIYDFWRMVWHEntASIIMVTNLvevgrVKCCKYWPDDTEIYKDIKVTLIETELLaeYVIRTFAVE 321  red-legged se...
XP_017950524 1034 RPNHYIATQGPmqetVYDFWRMIWHEntASIVMVTNLvevgrVKCCKYWPDDTEIYKDIKVTLIETELLaeYVIRTFAVE 1113 tropical claw...
KPP77246      225 RPNHYIATQGPmqetVIDFWRMVWQEntATIVMVTNLvevgrVKCCKYWPDDTEIYRDMKVTLIETQLLseYVIRTFAVE 304  Asian bonytongue
P28827        964 RPNHYIATQGPmqetIYDFWRMVWHEntASIIMVTNLvevgrVKCCKYWPDDTEIYKDIKVTLIETELLaeYVIRTFAVE 1043 human
Feature 1                                                             #     #                     
1RPM_A        166 K-RGVHEIREIRQFHFTGWPDHGVPyhATGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAeregvVD 244  human
KFP64904      322 K-RGAHEIQEIRQFHFTGWPDHGVPyhATGLLGFVRQVKSKSPPNAGPLVVHCSAGAGRTGCFIVIDIMLDMAeregvVD 400  red-legged se...
XP_017950524 1114 KqRGVHEIREIRQFHFTGWPDHGVPyhATGLLGFVRQVKSKNPPNSGPLVVHCSAGAGRTGCFIVIDIMLDMAeregvVD 1193 tropical claw...
KPP77246      305 K-RGAHEIREIRQFHFTGWPDHGVPyhATGLLGFVRRVKAKTPANAGPMVIHCSAGAGRTGCFIVIDIMLDMAeregvVD 383  Asian bonytongue
P28827       1044 K-RGVHEIREIRQFHFTGWPDHGVPyhATGLLGFVRQVKSKSPPSAGPLVVHCSAGAGRTGCFIVIDIMLDMAeregvVD 1122 human
Feature 1                                           
1RPM_A        245 IYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 278  human
KFP64904      401 IYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 434  red-legged seriema
XP_017950524 1194 IYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 1227 tropical clawed frog
KPP77246      384 IYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 417  Asian bonytongue
P28827       1123 IYNCVRELRSRRVNMVQTEEQYVFIHDAILEACL 1156 human

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