3DBG


Conserved Protein Domain Family
CYP170A1-like

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cd11049: CYP170A1-like 
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cytochrome P450 family 170, subfamily A, polypeptide 1-like actinobacterial cytochrome P450s
This subfamily is composed of Streptomyces coelicolor cytochrome P450 170A1 (CYP170A1), Streptomyces avermitilis pentalenene oxygenase, and similar actinobacterial cytochrome P450s. CYP170A1, also called epi-isozizaene 5-monooxygenase (EC 1.14.13.106)/(E)-beta-farnesene synthase (EC 4.2.3.47), catalyzes the two-step allylic oxidation of epi-isozizaene to albaflavenone, which is a sesquiterpenoid antibiotic. Pentalenene oxygenase (EC 1.14.15.32) catalyzes the conversion of pentalenene to pentalen-13-al by stepwise oxidation via pentalen-13-ol, a precursor of the neopentalenolactone antibiotic. The CYP170A1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410673
Aligned: 30 rows
Threshold Bit Score: 462.498
Created: 17-Sep-2010
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heme bindingputative
Conserved site includes 17 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:
  • Structure:3DBG: Streptomyces coelicolor CYP170A1 binds heme; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3DBG_A        43 DPLAFMSQLRdhGDVVRIKLGp------kTVYAVTnPELTGALALnpdyhiaGPLWESLEGLLGKEGVATAngpLHRRQR 116 Streptomyces co...
BAE78976      15 DSPEFQFSLM--ENLLRGRALrhltvdgvDAVFVRdPVLVRTILVnesknygKGELFRKARNLSRVGMLSDdeaMHRHYR 92  Streptomyces sp...
AAM97314      26 RPLDFLSSLAdhGDLVRIRLGr------kPVYVAThPDLVRSLLVtdahaytRGAGHAKALAFIGPILVATtgePHRRQR 99  Streptomyces na...
CAE53720      28 DPLGFLKSLRenGDLVRVNLGt------mPMYVATsAELIHEVTVrqarsfeKGRFFDRLRPLAGDGLATAngeVHRKHR 101 Streptomyces pe...
EDY52878      33 DPFRFLMGLRehGDSVLLHLGr------tPVLFVSdTELVHQALVaqgsvfaTGRIFERLGAVFGNGLPVAdipTHRKQR 106 Streptomyces cl...
EDX25326      32 EPIAFLESLRqyGDVVRLDIGt------wPVHMLTnPDHVHAVLVqqaqkfgRGRIFDRLRPMFGNGIVTTdgdFHRKQR 105 Streptomyces sp...
ACC38750      31 DPLGYLARLRsvADVVTIYLGp------rPSYLVTsHDLVRDMLVsqsecftRGAVFERAGKALGQGLLVSdgeFHRCQR 104 Mycobacterium m...
EDY49637      20 NPVRFLTSLQplGGLVRVDIPt-------PVHVVNsPDLLHRILVtdarsyeKGAAFDKARTILGNGVLFSeqpLHLGQR 92  Streptomyces cl...
YP_003766525  23 DPLKFFTSLPahGEVVKIQLGp------lPVHVVTtPELAWQVLAtdadkfdKGLVFDKMRPLFGDGLATSngeLNRRQR 96  Amycolatopsis m...
YP_003766987  22 QRVGFTSSLRvhGDIVRLFLGp------lETYFLTsPELVNHVLVaegssfsKGIIFDRFRPFMGNGLVMSegaFHLRQR 95  Amycolatopsis m...
Feature 1                                                                                        
3DBG_A       117 RTIQPAFRld-aiPAYGPIMEEEAHALTERWQpgktvdatsESFRVAVRVAARCLlrgqymdERAERLCVALATVFRGmy 195 Streptomyces co...
BAE78976      93 RLASPYLRss-svDAYVPAMRDIVRVHASSWRagdpvdiqsEMCRITCAIVVGTLieg-lppETTQALSERLSRLAWEmi 170 Streptomyces sp...
AAM97314     100 RMMQPCFHrq-rlGSYVSAMCSAATETADSWSaqdvvdvvpVMTELATAMIAKSLfvseraaHAEAELRKTGNAILTVar 178 Streptomyces na...
CAE53720     102 RLIQPMFHpg-riTMYAETMSSNALALADSWTagqevemeqAMAQFAIETLATTLfstdigqPAVVAIRENLPVVLQNll 180 Streptomyces pe...
EDY52878     107 RIMQPAFHrs-qmGRYSTTMTANAEAMVARWSpgrrlvadtELLDLALSNTTEILfssrlsdADRAEVHRSIPVIAHDvl 185 Streptomyces cl...
EDX25326     106 RMIQPAFHrs-hiAEYAEVMGRAAEEMTGSWTagseismvtEARRYALSSVAEMIfsgdlsrPAIAEVHRSLPIVLEGml 184 Streptomyces sp...
ACC38750     105 RLLQPAFHhr-qtPRYAEVMADAAQTLSRAWRpgvpievthEIHTMALAVVCRGLfhtdlggSAVSRVERALTGINQGvi 183 Mycobacterium m...
EDY49637      93 RLIQPAFHrs-rqPHWRTVAADCAAEHLDRWQdgdtldvldEMHRIALEMIIRLFfaarptpRTSERIHQCVNVLLGGim 171 Streptomyces cl...
YP_003766525  97 RLVMPAFGrtriaGYAEHTMTKLAGELVEAWRpgevvefdrRMQDLVLTIAGQTLfstalgdEALAEIRHSIPVMLKYvl 176 Amycolatopsis m...
YP_003766987  96 RLMQPAFHga-rlAAYADTMVRVTGELTGTWRagevrrldaDMQRLAITVVGETLfatelgrRAVAEARRSIPVVLKAgm 174 Amycolatopsis m...
Feature 1                                                                                        
3DBG_A       196 rrMVVPLGPLYRLPLPANRr-fNDALADLHLLVDEIIAErras-------gqkpDDLLTALLEAkddng-dpigEQEIHD 266 Streptomyces co...
BAE78976     171 -rKPLYGKSAARAARPGASrrlSKARTEFRELLAACIADllnsp------estiGYLSALLADSddqgn-rvltAEEVCE 242 Streptomyces sp...
AAM97314     179 -mSAILPGIYRRLPTPGNRq-lPPARTVIEETIAAYRAEgqd----------hgDMLSTLLRTTdatg--tgltDEEIRD 244 Streptomyces na...
CAE53720     181 -iRAASPKFLDRFPIRPNRd-fDAAAAKLRSVIDEVVATtrrag------tsehNDLLSVLLGArdsetgeylsDTEVRD 252 Streptomyces pe...
EDY52878     186 -vRAVMPAFLDPLPIPLNRr-cDTAAARLRVIVEGILDGhyrs-------pqhhDDLLTVLVQArdpetgrpmdGTQLRD 256 Streptomyces cl...
EDX25326     185 -lRAVMPKSLDRLPVPLNRr-fDAAAARLRAIIDQVIAQygdt-------qeggSDLLSLLLSSvdaetgermdAAQVRD 255 Streptomyces sp...
ACC38750     184 wqTLYPFDWLARLPIPVNRr-fRSAITDVRDLVTQLISAcrtt-------gegrEGVLAMLLQArdeetgrpmsDDQVRD 255 Mycobacterium m...
EDY49637     172 irFLSPGTLLERLPTPGNRr-fERAIRDLNTIVADLARTartttanpmgdgdhqDLFTTLCPHAadl----dcsLQQSCD 246 Streptomyces cl...
YP_003766525 177 -iRAFSPKFVEKLPIPPNRr-fDAAAARLREVIGETVVAared-------gadhGDLLSMLLLArdeetgegmsDRQVHD 247 Amycolatopsis m...
YP_003766987 175 -iRALSPRFLERVPVIPANrrfDRAVERLRRIVQEVIVGwraa-------gedhGDLLSMLMLArdpgtgegmtDDQVYD 246 Amycolatopsis m...
Feature 1            ##  #  ##  #                                                          # #   
3DBG_A       267 QVVAILTPGSETIASTIMWLLQALADHPeHADRIRDEVEAVTggrpvafedvrklrhTGNVIVEAMRLRPAvWVLTRRAV 346 Streptomyces co...
BAE78976     243 EAVMMLTAATVTTASVMSWSLHVLSQDSsVEERLLKDLTQRRsgnrang--hdassyTLRFLMEILRLYPPvWISCRKTL 320 Streptomyces sp...
AAM97314     245 EVMGLAITGIGGPAAIASWIFYELGQNPdLERRLHEELDTVLdgrppssqdltrlvfTQRLVKEALRKYPG-WVGARRTR 323 Streptomyces na...
CAE53720     253 ELSTILFAGAETTASTLSWTFYQLAEHPeVEAELVAEIKDVVgdrpvsiedvpkleaVRRVLDEVIRLHGV-TMLMRRTT 331 Streptomyces pe...
EDY52878     257 ELITMLGAGTETTSSIAAWAVHEIARHPvAERRLVAELDAVVgdrpvtpadiprltcAEEILNETVRLHAA-PLLTRRTV 335 Streptomyces cl...
EDX25326     256 EVIAIMFAGTETSATTLAWIFHELGRHPeAEKRLHAEIDAVVgkrpvrigdipqltyTNNVFQEALRMHSP-LLFTRQAL 334 Streptomyces sp...
ACC38750     256 EVLTLLLAATETSSTTLSWLFYELDRHPeIERGVARELDDKLanqsithdnlrdldlMKRVVDETLRLHTPnSILTRRAV 335 Mycobacterium m...
EDY49637     247 EAISVLVAGTETIATTLSWLFHELARHPdHENELRADLAAADgdtt-------rtglLDRLLNETLRLHTPnWVLMRRAR 319 Streptomyces cl...
YP_003766525 248 EVITILTTGAETTAVALAWFFHELGQHPdVERRFHAEVDEVLdgraarfedlpdlvyTHRIVNEILRRTPP-LILMRRAR 326 Amycolatopsis m...
YP_003766987 247 EVITLLTAGSETSAVALTWLFHELARHPeVGRRARAEVDAVLagraatfgdvaklayLRRIVSEVLRMYPI-WILMRRAL 325 Amycolatopsis m...
Feature 1                                                                   ###   #####   #      
3DBG_A       347 AeseLGGYRIPAGADIIYSPYAIQrdpksYDDNLEFDPDRWl-pERAANVPKya---mKPFSAGkRKCPSDHFSMAQLTL 422 Streptomyces co...
BAE78976     321 SdvaLGDHLLPAGTNVVFSSYLLHrdpehYPDPRRFDPDRWlsiNPSKADASy-----IPFGIGsKGCIGEVFAWEQLEA 395 Streptomyces sp...
AAM97314     324 EsvrLGGHEIPADAEVMYSAYALQndprwYPDPERFDPDRW---DPQQNATRvkkgawVPFSGGvYKCIGDAFTETETAV 400 Streptomyces na...
CAE53720     332 ApveLGGHLLPVGTEVGFSLYAMHrdptlYDDPDRFDPDRWl-pERRGDITRqa---yIPFGAGnRKCIGDAFVWTEATI 407 Streptomyces pe...
EDY52878     336 KptvLGDIRLPAGTEVAFSPYALHrdprhFPHPDAFWPERWq-hIGSGRPRSf----fLPFGGGaHKCIGDSMAWTQLHI 410 Streptomyces cl...
EDX25326     335 VpltLGGVSIPAGAELAYSPYALHrdpalFRDPGVFDPDRWq--QEAQDRRRah--qyIPFGAGqHKCIGDTFAVAEILT 410 Streptomyces sp...
ACC38750     336 RevqLGQFRIPAGAEVAFSPTAIHrdptvYDDPLSFKPDRWl-sENSAHVPRhm---fIPFGMGkHKCIGDSFAITEMHV 411 Mycobacterium m...
EDY49637     320 TeveLDGRTLPAGTEFLFSLSALHrdpqvFPHPDRFDPDRWl-pGNSPVQHRth---fIPFGDGnRKCLGDTFARTEMRA 395 Streptomyces cl...
YP_003766525 327 EdveLGGVALPAGSEVAVSQHTLHrdprwFPDPDRFDPDRWa-pGRTAELPKga---yIPFGAGaRLCPGHVFAPTEIGI 402 Amycolatopsis m...
YP_003766987 326 RdveLGGVRLPAGTEVMFSPFSLHfdprfHEAPERFDPDRWl-pERAARIPKga---yVPFGAGgRQCIGQAFAHTEITL 401 Amycolatopsis m...
Feature 1                                              
3DBG_A       423 ITAALATKYRfeQVAGSNDAVRvgi--tlRPHDLLVRP 458 Streptomyces coelicolor A3(2)
BAE78976     396 ILDVVTQEWKlsTEPDRQVRTApet--tlHPRRLLLVP 431 Streptomyces sp. KO-3988
AAM97314     401 AVAVIASRWRlrPADGRSVRAShla-thvVPRPLRMVV 437 Streptomyces nanchangensis
CAE53720     408 ALATVLARWQlrPLPGHTPKEVasa--vaHPDRMPMTV 443 Streptomyces peucetius ATCC 27952
EDY52878     411 TLATIYRRWR--LRPDRSHRVRqlpaaitRPDHLPMIA 446 Streptomyces clavuligerus ATCC 27064
EDX25326     411 AVATVASRWRlvPAPGVTVRELpag--mpQPSELPMIP 446 Streptomyces sp. Mg1
ACC38750     412 TAATVLRDWRlsLAPNAHVRERpwa--ivQPHGLRMIP 447 Mycobacterium marinum M
EDY49637     396 VAAAAVTRWTlrHTPGTKVGETrlf-atlQPTGLRMTA 432 Streptomyces clavuligerus ATCC 27064
YP_003766525 403 VAATIGARWRlvPVPGRKVYAQika--tmQPNRLPMTV 438 Amycolatopsis mediterranei U32
YP_003766987 402 VAASVLAGWElfPVPGVPVRLSvts--aaYPDRMPMTV 437 Amycolatopsis mediterranei U32

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