2Q9F


Conserved Protein Domain Family
CYP46A1-like

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cd20613: CYP46A1-like 
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cytochrome P450 family 46, subfamily A, polypeptide 1, also called cholesterol 24-hydroxylase, and similar cytochrome P450s
CYP46A1 is also called cholesterol 24-hydroxylase (EC 1.14.14.25), CH24H, cholesterol 24-monooxygenase, or cholesterol 24S-hydroxylase. It catalyzes the conversion of cholesterol into 24S-hydroxycholesterol and, to a lesser extent, 25-hydroxycholesterol. CYP46A1 is associated with high-order brain functions; increased expression improves cognition while a reduction leads to a poor cognitive performance. It also plays a role in the pathogenesis or progression of neurodegenerative disorders. CYP46A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410706
Aligned: 46 rows
Threshold Bit Score: 549.044
Created: 20-Sep-2017
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heme bindingchemical
Conserved site includes 27 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:
  • Structure:2Q9F: Human cytochrome P450 46a1 binds heme; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                   #    #               ##         #   #
2Q9F_A        13 QDVFLDWAKKyGPVVRVNVFHKTSVIVTSPESVKKFLMSTkynKDSKMYRAlqtvFGERLFGQGLVSECNYEr--WHKQR 90  human
APA31899      71 PDLYVQWSKKyGDVFKFQIFMNYVIVTNEPDAIREILINKnypKNEKIYSKigfpYNERFMGLGLVTETNDEr--WRKRR 148 Brachionus plic...
XP_021364557  66 DDYILELTETyGMIFRIYMWHQTFVIVSDPELVKNVLVTGnypKSKAIYSRlthlFGTRYVGNGLESEVDQTv--WIVQR 143 Yesso scallop
AHL88992      70 SGLILKWFNElGPVFKVYFFGEIIVSVNGPEAVKKVTIDLdlhKNDLTYNLlafpYSERALGTGLVTEIDKDk--WKKSR 147 Brachionus sp. ...
XP_021342064  61 FSYVLQNARKyGRTFRLIIMNQAIVFTTDPTAIKEMVVSNn-rKPKQVYGTmghiFGERFLGEGLLTESDHNaskGNLLR 139 Yesso scallop
OWF41183       9 DDYLIEISKThGPVFRLCMWHQVVVFVSDPECIKDVLVTGnhpKSKRMYSRlsnmFGTRFIGRGIETEVDNKi--WVLQR 86  Yesso scallop
AHL88994      96 PDILTDWVKEyGPCFKYQILDEVSIFTISPEAIKEMYIDKnfpKHPDIYAVigfpYGSRYMGTSLVTSLDNVr--HRHRR 173 Brachionus sp. ...
APA31886      56 QELHLQWFKIyGPVFKYQILDKIIVVINDETAVKTALIQEdfpKKGIGAFP----LGERFLGFGLLTEVDKSk--WRNRR 129 Brachionus plic...
AHL88993      70 PELVADWVRQyGHVIKFQLVDRFIVFTINPETIKDVFVTYnfsKHHHVYSIfgfpLGFRFLGNGLVTDLDNQr--WRHRR 147 Brachionus sp. ...
ELU08623      68 HEQFYIWSRQyGPLFRLHLLHRTMIVVSGKEIVKEILTKKdypKCDMIYGMlfnvCGQRFLGRGLVTNTDQNe--WTVKH 145 Capitella teleta
Feature 1              #                                               #                         
2Q9F_A        91 RVIDLAFsrsslvsLMETFNEKAEQLVEILEAKADgqt-pvsMQDMLTYTAMDILAKAAFGMetsmllgaqKPLSQAVKL 169 human
APA31899     149 QIFNPGFhrnvlvkCLGEFNEKTDQLLEKLRKISDgkt-eisLFKEINRMTLDIISSVAFGFcidtinfpeNEFSHNITG 227 Brachionus plic...
XP_021364557 144 MHFNHWFkphnlrqFTPDFNEYADSLVHQLGKYADgkt-htpMEELFHKVTLHLMCKVTFNFdlgtldspsHPFAYYLGF 222 Yesso scallop
AHL88992     148 ALFNHAFqrnvlktFLDEFNQKSNLLMEKLRSKADgkt-mvtMFPEVNKLALDIISSVAFGFnnnsinqseNYLNKLIIN 226 Brachionus sp. ...
XP_021342064 140 PKLQHWFqrsqmrnMMGEFNDSADVLVTKLSYLADgrt-qinMFNEFNHIALDLIGKVACSEdfqtihsdtNPFSRAFRD 218 Yesso scallop
OWF41183      87 IQLDQWFkphyirqLASEFNEFADRFVEYLETKANgkt-eihMLDTFNKLAMHLLYKVASSIdlgpltdenHPFVTKMKT 165 Yesso scallop
AHL88994     174 HIMNPAFsrqalnsFMDELNAKSDVLMNKLRNLADgkt-tirMLDELNNLTLDVIAAACFGMqnds-itkeNNFKKFVFE 251 Brachionus sp. ...
APA31886     130 TLMNNAFkkeilmqSLVEFNTKGDMLVQRLIHLSEstdncisLFNEINHMTLDVIAKVAFDLdtdslnnpeSKLNNYICR 209 Brachionus plic...
AHL88993     148 SMFNPSFhkqalvtFLQEFNNKSDVLMAKLRSMAEknk-diyILDEANNMTMDVIATVGFSMesds-inedNNLKGYVFK 225 Brachionus sp. ...
ELU08623     146 KHIAPAFkrfnlkgFMGQLDNCIDLWVNNLSLVADgqt-lvnLAGRLDQLALDIIINFSCGSdqlpseaesKKLFNCFEL 224 Capitella teleta
Feature 1                                                                                        
2Q9F_A       170 MLEGITASRNtlakf-lpgkRKQLREVRESIRFLRQVGRDWVQRRrealkr-geevpADILTQILKAEega---qdDEGL 244 human
APA31899     228 SFEAVNRCLTdpifminpfnYWKKRKYKKYIKDLRNFAKEKILDRlkeiednelsapDDILTAIVTKCred--kieIESL 305 Brachionus plic...
XP_021364557 223 TLAAFSKQMMnplfsmnpfkWKYCLQVRNAVAKLRLYAKERIAERrnekqr-gvhvpHDLLQSILELKeqnpsqitEEIL 301 Yesso scallop
AHL88992     227 LLEGINELLVdplvqikpnkLKMIKEFKNSLKELREFSRDHINQRikdlen-kehvpNDILTIIIKNYdgd--sfdMDDL 303 Brachionus sp. ...
XP_021342064 219 VFVGIIKNGRnplmvynplnWAYCRSVKKSCAFLRQYCSSMIDERlaamad-dthvpDDILTHMVRVHepkt-lhdRQIL 296 Yesso scallop
OWF41183     166 TITGFATLLSdplvainpfkWRFRRDVRDAIKYIRQSARQMMTDRnvakrn-gdyvpHDLLEYIMELKekhpskmtDEIL 244 Yesso scallop
AHL88994     252 SLRGLNRLLFnptikynpfeWGYIRRYKELLNDLRNLGRTQINNRikalqd-gsyvkDDLITLMVKNSked--nidIEDL 328 Brachionus sp. ...
APA31886     210 GLEAVTLDLTdplcylkpskRSHIKKLRESIRNLRHFSIESLNAKlqqmke-enflaHNILSLMVKNLktee-dfdFDKL 287 Brachionus plic...
AHL88993     226 SLEGFNKILLdpflkfsisgWSYIKNYRRLLKSLRDLGRCQILKRiesikd-dsyvsDDLITIMLKNNdne--kfeIEDL 302 Brachionus sp. ...
ELU08623     225 ILEGMEEQHRdplmklrpskWDFRKKVQAAARYVRDKGHEKVQEIlgrk----iqdeRSILGLLVSSLengt-raeIEDI 299 Capitella teleta
Feature 1              #  ##  ##  #                                                        #  #  
2Q9F_A       245 LDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGskryldfedLGRLQYLSQVLKESLRLYPPAWGTFR 324 human
APA31899     306 IDDFITFFNAGQETTANSIAFCFLELGKNTHILPRLREEIDSVLGakkevtyedLTKLEYTECVFKETLRLWPPAPEILR 385 Brachionus plic...
XP_021364557 302 LDHFVSFLIGGQETTANTLSFMVFLLAQNPACYKKLQDEIDTNVAavsvltsaeLDDLPYLDMVMKETLRLYPIVKQTFR 381 Yesso scallop
AHL88992     304 IDQFLTFFIAGQETTANSLAFAILELGRNPESFLKLREEVDKYIGfrnyislddLANLDYTSCVFKETLRKYPPAPEFSR 383 Brachionus sp. ...
XP_021342064 297 LDNFLTFFLAGQETTSCLLSFCLICLGKYPHVLKRLRDEIDQVVGektsvefedLGKLPYLDMVVQETLRRYPPSAATYR 376 Yesso scallop
OWF41183     245 LDNFLTFLLAGQETTAATLSFIIILLAKNPECYKKLQKEIDDNIGavsvvtlneLEKLPYLDMVLKETLRLYPVVKVSFR 324 Yesso scallop
AHL88994     329 VDDFLTFFVAGQETTSNMLAFSLLELGQNPDVLKTLKEEVDSTIGskqhittedLNKLKYLESVIKETLRKWSITPLINR 408 Brachionus sp. ...
APA31886     288 VDDFITFFVGGQETTANALSFCFLELGQNQQVLQKLRAEVDEVIGnkvvisqddLARLEYTSAVFKESMRKWPPVPSFSR 367 Brachionus plic...
AHL88993     303 IDDFVSFFIAGQETTANLIAATILEVGKKPEILLKIKNEVEQEIGlktdfryedLSKLKYMNCVIKETLRKWSIVPFLSR 382 Brachionus sp. ...
ELU08623     300 LDDYVTVFIAGQETTSNALAFIFHEIARHPKVLQRLINEVEGKIGnrsslcyedTLSLTYMTQVIKETLRLYPIVSATAR 379 Capitella teleta
Feature 1                                                                      ###   #####  ##  #
2Q9F_A       325 LLEEETLIDGVRVPGNTPLLFSTYVMGRMdtyFEDPLTFNPDRFGpgap------kprfTYFPFSLGHRSCIGQQFAQME 398 human
APA31899     386 VSTDELCIGGFKIPKNTQINLSPYFSGRNekyFPNPNEFRPERFLnev--------ssySHFPFSLGPRNCIGRNFAMIE 457 Brachionus plic...
XP_021364557 382 ETVRNERLGEFSLPAGTDIMVSFYANGRStktLTNPSQFLPERFDpkane----rvgtyVYTPFSAGPHTCIGKKFAEIE 457 Yesso scallop
AHL88992     384 KTHKEIEINGVKIPANTWLMCSPYISGHNpeyFPEPEEFKPERFLkesefskknlinsyTFFPFSLGPRNCIGQNFAKIE 463 Brachionus sp. ...
XP_021342064 377 ETNQNDVIDGFPIPKETSVCFSMYVLSNLeeyFTDPLEFQPERFSeenrk----rigsyRYFPFSMGPRTCIGKHFAEVE 452 Yesso scallop
OWF41183     325 ETTTDYKLGGHHIPAGTDMVISFYATSRSeqnIRQPLDFLPERFDndsse----riskyAVTPFSAGPHTCIGKKYAEME 400 Yesso scallop
AHL88994     409 QSAVPIKIYDFDIPVGSEIQVSSYVSGRMdefFPNPKKFDPERFYnnegk-----iknyTYFPFSLGPRNCIGQNFSIIE 483 Brachionus sp. ...
APA31886     368 LSSQQCEILGYRIPKKTWFQMPVYIMGRNekyYPNPDKFIPERFLtehpfskenkinsyTFFPFSLGPRNCIGQNFAKIE 447 Brachionus plic...
AHL88993     383 KVEKPLNILGSDIPLGTNIQTSSYVSGNCeefFPNPTEFDPERFLnekne-----iknyTYFPFSVGPRNCIGQNFAQIE 457 Brachionus sp. ...
ELU08623     380 EPQRDVVLHGYNVPKGTFLAVPFSVLHRQpeyYENPMEFNPDRFHpeah------rtlyAFTPFSLGQRSCLGKQFAMVT 453 Capitella teleta
Feature 1                                                      
2Q9F_A       399 VKVVMAKLLQRLEfr--------lVPGQRFGLQeqATLKPLDPVLC 436 human
APA31899     458 SKIFIAKFVQNFDfk--------lKENQSFKPKlmTTLRPADGTLC 495 Brachionus plicatilis
XP_021364557 458 TKIIMAKIIQNFDfe--------lVPGQPMGVIdcGTLRILGGAKC 495 Yesso scallop
AHL88992     464 AKIFLAKFVQNFDir--------lDESQSYGQKelLTLRPKDGCRV 501 Brachionus sp. 'koreanus'
XP_021342064 453 SKIILVKFLQWFNft--------lDPDQSTDIQemLLHRPKDGALC 490 Yesso scallop
OWF41183     401 MKIIIAKIMQNFDfe--------lIPGQTSEVQgnVFIQPKSEVKC 438 Yesso scallop
AHL88994     484 GKICLAKFVQILIlnlvqnfdfklDPNQSFEGVqhATINPASGTMA 529 Brachionus sp. 'koreanus'
APA31886     448 GKLILAKLIQHFDfe--------lDPNQSFDVVqyTTLRPVDGVLW 485 Brachionus plicatilis
AHL88993     458 AKVCLTKFFQNFDfe--------lDPNQSFYPIqhSTISPAGRTKC 495 Brachionus sp. 'koreanus'
ELU08623     454 MKIVLIKFLQNFRye--------vDPSYVFAVKemSTFKPKGGCPM 491 Capitella teleta

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