2BE1,2HZ6


Conserved Protein Domain Family
Luminal_IRE1

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cd09769: Luminal_IRE1 
Click on image for an interactive view with Cn3D
The Luminal domain, a dimerization domain, of the Serine/Threonine protein kinase, Inositol-requiring protein 1
The Luminal domain is a dimerization domain present in Inositol-requiring protein 1 (IRE1), a serine/threonine protein kinase (STK) and a type I transmembrane protein that is localized in the endoplasmic reticulum (ER). IRE1, also called Endoplasmic reticulum (ER)-to-nucleus signaling protein (or ERN), is a kinase receptor that also contains an endoribonuclease domain in the cytoplasmic side. It plays roles in the signaling of the unfolded protein response (UPR), which is activated when protein misfolding is detected in the ER in order to decrease the synthesis of new proteins and increase the capacity of the ER to cope with the stress. IRE1 acts as an ER stress sensor and is the oldest and most conserved component of the UPR in eukaryotes. During ER stress, IRE1 dimerizes through its luminal domain and forms oligomers, allowing the kinase domain to undergo trans-autophosphorylation. This leads to a conformational change that stimulates its endoribonuclease activity and results in the cleavage of its mRNA substrate, HAC1 in yeast and Xbp1 in metazoans, promoting a splicing event that enables translation into a transcription factor which activates the UPR. Mammals contain two IRE1 proteins, IRE1alpha (or ERN1) and IRE1beta (or ERN2). IRE1alpha is expressed in all cells and tissues while IRE1beta is found only in intestinal epithelial cells.
Statistics
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PSSM-Id: 188875
Aligned: 31 rows
Threshold Bit Score: 227.2
Created: 5-Jan-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
homodimer
Conserved site includes 26 residues -Click on image for an interactive view with Cn3D
Feature 1:homodimer interface [polypeptide binding site]
Evidence:
  • Structure:2BE1_A; Saccharomyces cerevisiae IRE1 luminal domains form a homodimer; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
2BE1_A      10 SDILIAADVEGGLHAVDRrNGHIIWSIEpe----------nFQPLIEIQEpsr------------------------leT 55   baker's yeast
AAP92915   185 EDFVLLATVDGDLYASDRkTGRHLWHLEv------------DQPVVETKHyrtnnsvl--------------dddyrpvD 238  Hypocrea jecorina
EAK84747   123 ANTVVLTTVEGGLYALHReTGKHLWSLSphash---esdslLRPLVTALYgkeqksfaeiaqgghifasplsdsspllkT 199  Ustilago maydis 521
EAU84069    62 LDIVLVASIDGKFHALSRsTGKILWSMPafaraegsstlssLAPLVRTTHpendpd-----------------dfdddtT 124  Coprinopsis cine...
EDJ97506   202 EDFVIMATVDGDLYACDRhTGREIWHHKm------------DSPMVEVTLhranvsvl--------------dsdysdiD 255  Magnaporthe gris...
EDO02347   134 EDFVLLATVDGSVWARDRkTGKQKWRMEl-----------pEVSMISTKHhkknksadfs----------dvptskwgiD 192  Sclerotinia scle...
EDP43839    48 SNVLVVTTLDGRLHGIDRtSGHVLWSFQaned------slhTSPLVASTYqhrtmeqlakdar----dhgdstllralqG 117  Malassezia globo...
EDU45299   136 EDFVLLATVDGHIHARDRyDGNEIWELT-------------GRPMLETIYnvseg--------------------dvgpP 182  Pyrenophora trit...
EED14594   127 EDFVLLATVDGTIHARDRkTGSPRWALEv-----------pSSPMVESIYhnrsitgl-------------dteasvrdD 182  Talaromyces stip...
EFQ35547   172 EDFVLMATVDGHLYASDRgTATERWRLEv------------DQSMVETKHyrlnasdl--------------dddynfiD 225  Glomerella grami...
Feature 1                                                         #####                  # ####
2BE1_A      56 YETLIIEPFgDGNIYYFNa----------------hQGLQKLPLSIRQLVSTSPLHLktnivvndsgkivEDEKVYTGSM 119  baker's yeast
AAP92915   239 HYIWAVEPSrDGGLYVWIpd--------------sgAGLVRTGFTMKHLVEELAPYAg-----------dEPPVVYTGDK 293  Hypocrea jecorina
EAK84747   200 GGIYIVEPSsAGDIYVLSsagakagapsatsgepgtVQLDKLPLTLPQLVELSPFSFa-----------gDDTRVFVGQK 268  Ustilago maydis 521
EAU84069   125 PETYIIEPQ-SGHIYVVNse---------------dDSLQRFPFSMAELVDMSPFTSpg----------dDEKRVFIGRK 178  Coprinopsis cine...
EDJ97506   256 HYLWIVEPTqDGQLYFYIp----------------nRGLVPAALTIKQLVDEPFQGK-------------NPDVYYAGDK 306  Magnaporthe gris...
EDO02347   193 DYVWIVEPTeHGGLWIYRpdv-------------pnGGLVDTGLTMKKLVDDMSPYQs-----------dDPEVVYTGSR 248  Sclerotinia scle...
EDP43839   118 GGFYVVEPSqAGHLYLLHipvg-----------atkPILDKLPFSLPELVSMSPFSLh-----------sDDPRIFVAEK 175  Malassezia globo...
EDU45299   183 PFVWVVEPReDGALYLLSpg--------------phPHLQHLGVTVKQLAESAPYSSdd----------pELPVVYNVEK 238  Pyrenophora trit...
EED14594   183 DFLWIVEPSmDGSLYIFSpg--------------krGGLHKLGLTVKDLVNETPYSGt------------DPAVTYTARK 236  Talaromyces stip...
EFQ35547   226 HYVWAIEPTrDGDIYYWVpgs-------------sePRLLPTGLTMKQMVDEGASALe------------NPPIVYTGTK 280  Glomerella grami...
Feature 1       ###           # ###  #                                                       ##
2BE1_A     120 RTIMYTINMLNGEIISAFGPGSKNGyfgsqsvdcs---------------------------peekiklqeCENMIVIGK 172  baker's yeast
AAP92915   294 KTTMVTLDAATGRVLKWFGSSGSQVneaesclrpna-------------------------fddrdttecsSMGTITLGR 348  Hypocrea jecorina
EAK84747   269 QTTLVELNIETGELGAVFGGRQAGVwcgaqahdldvglsgssardssksassnpescfddeptlsgsssksTSKLAYIGR 348  Ustilago maydis 521
EAU84069   179 ETSLLLLELETGRIKATLNSECPPYddrridlde----------------------------leepesrgsSTTEVFIGR 230  Coprinopsis cine...
EDJ97506   307 NSAMLTLDVRTGKTVKYIGSRKNHIetkdscirrdnf-----------------------mvspdgdeecgNSGTITIAR 363  Magnaporthe gris...
EDO02347   249 KTQMVQVDATNGKILQVFGGDYIVDtkdqscspkn--------------------------gfvgreadecQNPTIWLGL 302  Sclerotinia scle...
EDP43839   176 RTSLMELNVFTGTVRAVYSGSSHEAadlvgkplparprvfreqdth-----apldtdddtydvidedddaiESPWVYVGR 250  Malassezia globo...
EDU45299   239 KTFMILVDAASGKVKQSFSPGGTFPnddscapes----------------------------knffarerdCRGVIDIGQ 290  Pyrenophora trit...
EED14594   237 ETTLYTVDARTGSILRVFSSRGPMStdhnckvdrfatddv----------------lddnvdgtdaancggTTGTLTIGR 300  Talaromyces stip...
EFQ35547   281 KTTMITLDAATGRVLKWFGSGGSHVneaesclrpna-------------------------lydqnneecsSIGSITLGR 335  Glomerella grami...
Feature 1             # #                   # ###                                              
2BE1_A     173 TIFELGIHSY-------DGASYNVTYSTWQQNVLDvplal---qntfSKDGMCIAPFr-DKSLLASDLd----------- 230  baker's yeast
AAP92915   349 TEYTVGIQRRd------GRPIATLKYAEWGPNTFDsdlyq---qyhaSLDNHYITSQh-DGRIYAFDKsq---------- 408  Hypocrea jecorina
EAK84747   349 TDYTLNIHSRn-----sPEALQTLHFSTFAPNAGDrdvqil-wtqadHPDQRAIFGMpeDGSVVCFNLtevdrasrasdv 422  Ustilago maydis 521
EAU84069   231 TDYYISIYPHrskgygtRAPVQNLSFSVYGPNNEDnllqa---nyrrTSDDAYIQGFp-NGDVYSFKTkseg-------- 298  Coprinopsis cine...
EDJ97506   364 TEYTVSISNSe------GLPIATIHYWEWKPNHYDmdlva---qyrsTMDNQYIATGa-NGVAYGFDHtr---------- 423  Magnaporthe gris...
EDO02347   303 SKYEVNIVGKd------HHPIATLMYNEWGPNVQDakkyg--dkyhqTLDSKYILAGq-DGRVMGFDRer---------- 363  Sclerotinia scle...
EDP43839   251 TDYTLKVHVRh-----vPQAEQSVHYHVYTPNMADrdvvqlwhqmnqPADHRAILSSpeNATLICFDLrlarnpq--rhs 323  Malassezia globo...
EDU45299   291 TQYIITIHNKk-----tNEHICTLKYAEWNPNSRDrdlqs---qydqTLDKQYIFTKa-DGAVSAYDYkrp--------- 352  Pyrenophora trit...
EED14594   301 VEYAIAIQNTe-----tGELICTLKYSEWTPNNRDidlqs---qyskTMDQSHIYSMh-DGVVLGFDHs----------- 360  Talaromyces stip...
EFQ35547   336 TEYEVGIARRd------GRPIATLKFFDWTPNTNDydlls---qyhqSIDARYHTTTh-DGRIYGFDYgkt--------- 396  Glomerella grami...
Feature 1                                                                                      
2BE1_A     231 ---FRIARWVSpTFPGIIVGLFDVFndlr-------tneNILVPHPFnpgdh---------------------------- 272  baker's yeast
AAP92915   409 -aeNDLPLYTH-KFSSPVARVFDVCrpwda----nagsnPELVVLPQppipalde------------------------- 457  Hypocrea jecorina
EAK84747   423 sddAHRALWSA-ELRASVAGVFDVVypaphlqntkslsrPILVSHPPapihrifpqiseqqaq----------------- 484  Ustilago maydis 521
EAU84069   299 grvQTQPLWVQ-KFHAPTVAVFDVLrg-----------sTPLQPHPHafvllqprpraed-------------------- 346  Coprinopsis cine...
EDJ97506   424 -apGNQQRFRH-TFSSPVARVFDVLrprga----pagssPDLKILPQppmpfsdq------------------------- 472  Magnaporthe gris...
EDO02347   364 -nrEHELLFQQ-KLPSAVVRVFDIFrpwgi-----eeknLKLMMLPQpkpelraen------------------------ 412  Sclerotinia scle...
EDP43839   324 tqpMPPVLWSV-RLGELPVDIYDVVf------------aPSAMDAPLlrpalvphspgilstiveqqlrrdprdqpdqqd 390  Malassezia globo...
EDU45299   353 rsaQGRPVYTH-QLPGPVARVFDVArplnd-----lssePPLVLLPQptgpvl--------------------------- 399  Pyrenophora trit...
EED14594   361 --rMERPRYTQ-RFSSPVVRVFDVArpvnvqs-pdsplpLVLLSQPLeppdpdy-------------------------- 410  Talaromyces stip...
EFQ35547   397 -nkGDLPVFCKaQFSSPVVKVFDVCrpvgl----eplinPDLIVLPQpvppatdg------------------------- 446  Glomerella grami...
Feature 1                                                                                      
2BE1_A     273 ------------esissNKVYLDQTSn-LSWFALSSqnfpslvesapisryas--------------------------- 312  baker's yeast
AAP92915   458 ----------stvkmrsNSIFLNQTEs-GDWYALSGrayplildapvaqisrd--------------------------- 499  Hypocrea jecorina
EAK84747   485 --eqdsrdfrnslsprrRSAYLGIAG--DSLYAMSShrfplvaftsraaaglpdginsqaardswlpglppsqkgwadeg 560  Ustilago maydis 521
EAU84069   347 ----vipgldrsllrgaKSAYVGMVEetGSLYAMSPshyplvafgdaeegrkgrliegsggs------------------ 404  Coprinopsis cine...
EDJ97506   473 ----------adldrrrSKVYLNRTEt-GGWYALGGvyyplteqsseavaskh--------------------------- 514  Magnaporthe gris...
EDO02347   413 --------evpgldqnrNRVAINLSKd-GSLYAMSGksyplavagdeaqiyqr--------------------------- 456  Sclerotinia scle...
EDP43839   391 mptssssssssstdeyqLNAFIGSASd-GSLFALSSaryplaglsehaailrgssdard--------------------- 448  Malassezia globo...
EDU45299   400 ------------hedrlNYVVINQTEs-GAWYALSEanypavtsdvpdapcyk--------------------------- 439  Pyrenophora trit...
EED14594   411 ----------aaspdtdHRVFIDCTEa-GGWYAMSEttyplvtgragmaqcydk-------------------------- 453  Talaromyces stip...
EFQ35547   447 ----------starirsQRIFVNQTEt-GNWYALSGrsyplildapvaktssp--------------------------- 488  Glomerella grami...
Feature 1                                           
2BE1_A     313 ----------sdrwrvssifedetlfKNAIMGVHQIY 339  baker's yeast
AAP92915   500 ---------dlwdmahafdsinpnklSKALVGTHFLN 527  Hypocrea jecorina
EAK84747   561 qrkcasfgcwlgsyslyvdstaegklRDSLLGSNPTL 597  Ustilago maydis 521
EAU84069   405 aqsihdiirnqkeadrrircednprdRECLLGMHPLD 441  Coprinopsis cinerea okayama7#130
EDJ97506   515 ---------rgaieediwermddnilDKLLIGTHSLN 542  Magnaporthe grisea 70-15
EDO02347   457 ---------glwerkdywqrmdqpelAEALTGVHFLD 484  Sclerotinia sclerotiorum 1980 UF-70
EDP43839   449 ---pamdssrvdqkvlrpwiggyrvrSPVLSPQHALP 482  Malassezia globosa CBS 7966
EDU45299   440 ----------qsevvydwdatytlpdKSSLIGVHRLD 466  Pyrenophora tritici-repentis Pt-1C-BFP
EED14594   454 ---------dffrdghslltldrerqRKALAGVHLVN 481  Talaromyces stipitatus ATCC 10500
EFQ35547   489 ---------dwlqlatpwekmnetqrIRAMIGTHYMD 516  Glomerella graminicola M1.001

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