6PVL,6DVW,6MHO,6PVN


Conserved Protein Domain Family
TRPV3

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cd22194: TRPV3 
Transient Receptor Potential channel, Vanilloid subfamily (TRPV), type 3
TRPV3 is a temperature-sensitive Transient Receptor Potential (TRP) ion channel that is activated by warm temperatures, synthetic small-molecule chemicals, and natural compounds from plants. TRPV3 function is regulated by physiological factors such as extracellular divalent cations and acidic pH, intracellular adenosine triphosphate, membrane voltage, and arachidonic acid. It is expressed in both neuronal and non-neuronal tissues including epidermal keratinocytes, epithelial cells in the gut, endothelial cells in blood vessels, and neurons in dorsal root ganglia and CNS. TRPV3 null mice have abnormal hair morphogenesis and compromised skin barrier function. It may play roles in inflammatory skin disorders, such as itch and pain sensation. TRPV3 is also expressed by many neuronal and non-neuronal tissues, showing that TRPV3 might play roles in other unknown cellular and physiological functions. TRPV3 belongs to the vanilloid TRP subfamily (TRPV), named after the founding member vanilloid receptor 1 (TRPV1). The structure of TRPV shows the typical topology features of all TRP ion channel family members, such as six transmembrane regions, a short hydrophobic stretch between transmembrane segments 5 and 6 and large intracellular N- and C-terminal domains.
Statistics
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PSSM-Id: 411978
Aligned: 9 rows
Threshold Bit Score: 1092.49
Created: 1-Jul-2020
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
tetramer
Conserved site includes 89 residues -Click on image for an interactive view with Cn3D
Feature 1:tetramer interface [polypeptide binding site]
Evidence:
  • Comment:All members of the TRPV channel subfamily have a basic architecture of homo- or hetero-tetrameric arrangements around a central pore. Different subunits within the TRP family are also able to form heteromeric channels, with the heteromeric channels exhibiting distinct functional properties as compared to the homomeric channels.
  • Structure:6PVL: Mouse TRPV3 forms a homotetramer; contacts at 4A.
  • Structure:6MHO: Human TRPV3 forms a homotetramer; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
6PVL_A        67 PMDSNIRQCLSGNCDDmdspqspqddv------tetpsnpnspsANLAKEEQRQKKKRLKKRifaavsegcveeLRELLQ 140 Mus musculus
6DVW_A        67 PMDSNIRQCLSGNCDDmdspqspqddv------tetpsnpnspsANLAKEEQRQKKKRLKKRifaavsegcveeLRELLQ 140 Mus musculus
6MHO_A        68 PMDSNIRQCISGNCDDmdspqspqddv------tetpsnpnspsAQLAKEEQRRKKRRLKKRifaavsegcveeLVELLV 141 Homo sapiens
6PVN_A        67 PMDSNIRQCLSGNCDDmdspqspqddv------tetpsnpnspsANLAKEEQRQKKKRLKKRifaavsegcveeLRELLQ 140 Mus musculus
XP_018413136 158 PMDSQIIHGNHEEIDSpveestqlll---------eesnsesesSHPKDETRRDKSLLLRAVsegd-----tklLMRLLR 223 Nanorana parkeri
KFO74380      67 PMDSNIRPCASGNGEDmdspqslqddateyspnvdsccanisqgAEQTSARKKLKKYIFRAVsegn-----ieeLQCLLA 141 common cuckoo
XP_014436837  77 QMDDFIICEPCGEPSFpstnghy---------------dqvdssIETSGWDNRDVSDFFDDVa-----------KGDLKK 130 Chinese soft-sh...
XP_018101159  57 QMDTKNFSDDRKPEDIdtpqttqtv----------fpcswqarkLALASNTRKPIKKLLFKAvseg----dtemVTELLA 122 African clawed ...
XP_006010861  35 EMDSEDDKCPDHMDIPyfv-----------------------vpIETVLECSNPKETRIGELsea-------icDGSLEK 84  coelacanth
Feature 1                                    #       ###                                     #  #
6PVL_A       141 DLQDLCRRrrgldvPDFLMHKLTASDTGKTCLMKALLNInp----nTKEIVRILLAFAEENdildrfinAEYTEEAYEGQ 216 Mus musculus
6DVW_A       141 DLQDLCRRrrgldvPDFLMHKLTASDTGKTCLMKALLNInp----nTKEIVRILLAFAEENdildrfinAEYTEEAYEGQ 216 Mus musculus
6MHO_A       142 ELQELCRRrhdedvPDFLMHKLTASDTGKTCLMKALLNInp----nTKEIVRILLAFAEENdilgrfinAEYTEEAYEGQ 217 Homo sapiens
6PVN_A       141 DLQDLCRRrrgldvPDFLMHKLTASDTGKTCLMKALLNInp----nTKEIVRILLAFAEENdildrfinAEYTEEAYEGQ 216 Mus musculus
XP_018413136 224 NIKDRSRRysktvaQDYLLKKLTAKDTGKTCLMKALLNIns----nTPEITRILISFSENNgfwdrfinAEYTEENYKGQ 299 Nanorana parkeri
KFO74380     142 ELKERSNAcrnmtvPDYLMKKFTAVDTGKTCLMKALLNIne----nTNEIVNTLLSFAEENgilerfinAAYTEEAYKGQ 217 common cuckoo
XP_014436837 131 IKSWLSRIq----rNKWQMDELREKETGKTCLMKALLNPvnnspetTEEIVTSLIECAKGSgclkklldASFTAKAYEGQ 206 Chinese soft-sh...
XP_018101159 123 EAKSYSMVfaktqaKDFLIHKLTSKDTGKTCLMKALLNIne----mTPEIVRILLTFAEENdilqplvnAEYTEENYRGQ 198 African clawed ...
XP_006010861  85 VKAILNEL------PSKTFEEFKVSANGQTYLMKALLNFne----kTKETVELLLTFAEDNgflkvlinAEYENGDYKGQ 154 coelacanth
Feature 1               ###                      #      ### # #          ##                      
6PVL_A       217 TALNIAIERRqGDITAVLIAAGadvnaHAKGVFFnp-kyQHEGFYFGETPLALAACTNqPEIVQLLMENEqtditsqdsr 295 Mus musculus
6DVW_A       217 TALNIAIERRqGDITAVLIAAGadvnaHAKGVFFnp-kyQHEGFYFGETPLALAACTNqPEIVQLLMENEqtditsqdsr 295 Mus musculus
6MHO_A       218 TALNIAIERRqGDIAALLIAAGadvnaHAKGAFFnp-kyQHEGFYFGETPLALAACTNqPEIVQLLMEHEqtditsrdsr 296 Homo sapiens
6PVN_A       217 TALNIAIERRqGDITAVLIAAGadvnaHAKGVFFnp-kyQHEGFYFGETPLALAACTNqPEIVQLLMENEqtditsqdsr 295 Mus musculus
XP_018413136 300 TALHIAIERRqLEIVKYLIAKGantnaCAKGVFFnp-vdKNDGFYFGETPLALAACTNqPEIVDLLMSNShtnvsmqdtf 378 Nanorana parkeri
KFO74380     218 TALNIAIERRqYEITQSLIEKGadvnaHAQGVFFnp-khKHEGFYFGETALALAACTNqPDIIQLLMDNArtnissqdsr 296 common cuckoo
XP_014436837 207 TALHIAIEKRlDRIVKLLVENGadvhiQAKGTFFqpltwRDDCFYFGEYPLSQAACTNqPKLVEFLLDKVsnpya-qdsl 285 Chinese soft-sh...
XP_018101159 199 TALNIAIERRqLELVKYLIEKGagidvRAQGRFFnp-knKYEGFYFGETPLALAACTNqPDIVQLIMDKCptigtmqdsl 277 African clawed ...
XP_006010861 155 TALHIAIERRcKDIVKLLLNKGadvdaKACGDFFnp-kmNMDGFYFGETPLALAACTNqLEIVQMLLEKGsdtgf-qdsr 232 coelacanth
Feature 1                  # #       #                                                           
6PVL_A       296 GNNILHALVTVAEdfktQNDFVKRMYDMILLRSgnw----------elETMRNNDGLTPLQLAAKMgKAEILKYILSREI 365 Mus musculus
6DVW_A       296 GNNILHALVTVAEdfktQNDFVKRMYDMILLRSgnw----------elETMRNNDGLTPLQLAAKMgKAEILKYILSREI 365 Mus musculus
6MHO_A       297 GNNILHALVTVAEdfktQNDFVKRMYDMILLRSgnw----------elETTRNNDGLTPLQLAAKMgKAEILKYILSREI 366 Homo sapiens
6PVN_A       296 GNNILHALVTVAEdfktQNDFVKRMYDMILLRSgnw----------elETMRNNDGLTPLQLAAKMgKAEILKYILSREI 365 Mus musculus
XP_018413136 379 GNTVLHALVNASEdsksHNTFIINLYDKIIRKCnnk----------slEGIRNKKGFSPMQLAAKTgKLEMLKYFLNREI 448 Nanorana parkeri
KFO74380     297 GNNILHALVTVAEnlktQNDFVIRMYDMILLKSkdr----------nlETTRNKEGLTPLQLAAKTgKLEILKYILSREI 366 common cuckoo
XP_014436837 286 GNTVLHALVMVADdseeNTAFVTEIYDQILKASekkcietrneskknlEKISNKEGLTPLQLAATYgKIKIFQHILGRSF 365 Chinese soft-sh...
XP_018101159 278 GNTVLHALVIVADnseaQNDFIIRMYDTILRNCknk----------slEQIPNNEGLTSMQLAAKLgKTEILHSILSREI 347 African clawed ...
XP_006010861 233 GNTVLHALVEVADdsenYINSIKQIYEEILTKHege----------nlEAVTNNKNLTPVHLAAQRgKRWILKYILEREL 302 coelacanth
Feature 1                         ### ##                                                         
6PVL_A       366 kekpl---rslsRKFTDWAYGPVSSSLYDLTnVDTTTDNSVLEIIVYNTnidnrhemltlEPLHTLLHTKWKKfaKYMFF 442 Mus musculus
6DVW_A       366 kekpl---rslsRKFTDWAYGPVSSSLYDLTnVDTTTDNSVLEIIVYNTnidnrhemltlEPLHTLLHTKWKKfaKYMFF 442 Mus musculus
6MHO_A       367 kekrl---rslsRKFTDWAYGPVSSSLYDLTnVDTTTDNSVLEITVYNTnidnrhemltlEPLHTLLHMKWKKfaKHMFF 443 Homo sapiens
6PVN_A       366 kekpl---rslsRKFTDWAYGPVSSSLYDLTnVDTTTDNSVLEIIVYNTnidnrhemltlEPLHTLLHTKWKKfaKYMFF 442 Mus musculus
XP_018413136 449 keken---rvlsKRFTDWAYGPVSSHLYDLYdVDTSSKNSVLEIVVYNTainnrhellalEPLQTLLKMKWKKfaRNMFI 525 Nanorana parkeri
KFO74380     367 rdkpn---rslsRKFTDWAYGPVQSSLYDLTeLDTTTDNSVLEIIVYNTnignrhemltlEPLNSLLRMKWKKfaRHMFF 443 common cuckoo
XP_014436837 366 pcegkhsmahlsRKFVEWAYGPVCCSLYDLSeVDTGERHSALKIVVYNTnhekhydmldvEPLKELIGIKWRHfaAVMFG 445 Chinese soft-sh...
XP_018101159 348 keken---mvlsRKFTDWAYGPVSSSLYDLTgIDTCWPNSVLEIAVYNTkinnrqelltlEPLHTLLQMKWKKfaRYMFF 424 African clawed ...
XP_006010861 303 kdkkt---rnlsRKHTTWAYGPVSSSVYDLTgLDADQDISVLKLIVYNSeiperhemlalEPLNTVLCMKWEKfaSKMFS 379 coelacanth
Feature 1                         #                                                              
6PVL_A       443 LSFCFYFFYNITLTLVSYYRprededlp----------hplalthKMSWLQLLGRMFVLIWATCISVKEgIAIFLLRPSD 512 Mus musculus
6DVW_A       443 LSFCFYFFYNITLTLVSYYRprededlp----------hplalthKMSWLQLLGRMFVLIWATCISVKEgIAIFLLRPSD 512 Mus musculus
6MHO_A       444 LSFCFYFFYNITLTLVSYYRpreeeaip----------hplalthKMGWLQLLGRMFVLIWAMCISVKEgIAIFLLRPSD 513 Homo sapiens
6PVN_A       443 LSFCFYFFYNITLTLVSYYRprededlp----------hplalthKMSWLQLLGRMFVLIWATCISVKEgIAIFLLRPSD 512 Mus musculus
XP_018413136 526 ASFLLTFAFNLVFTLLFYQPhgdkapk------------slnlssTSGQFELLGQAFIVIWATCLIIKKgASIFWLSPSD 593 Nanorana parkeri
KFO74380     444 MSCCFYFLYNITLTLVSYHRpneneapp----------yplalmhGVGWLQLSGQVMVMLGAIFLAIKEsVAIFLLRPSD 513 common cuckoo
XP_014436837 446 ISTALYLLYITIFTVMAAYQpqinqqmaapntsvhilqqvlheanGGNPWLLVAQIYTLIAAISFLVKSgLEIFWMWPFT 525 Chinese soft-sh...
XP_018101159 425 MSFLLSFTYNIVLTLVSYYRpreeqdr-----------yplnlsyENGWIQLIGQMFIIVCATYMMVKEaVVIFLVKQSD 493 African clawed ...
XP_006010861 380 ISFLFYFTYNVILTLISYYRpnrdkfp-----------vpldlsrHSGRLHFSGQVFVFICAIYLMIKEsIELILLRPSD 448 coelacanth
Feature 1                                               #  #   #  ##       ##  #  ##  ##   # ##  
6PVL_A       513 LQSILSDAWfHFVFFVQAVLVILSVFLYLFaykEYLACLVLAMALGWANMLYYtrgfqSMGMYSVMIQKVILhdVLKFLF 592 Mus musculus
6DVW_A       513 LQSILSDAWfHFVFFVQAVLVILSVFLYLFaykEYLACLVLAMALGWANMLYYtrgfqSMGMYSVMIQKVILhdVLKFLF 592 Mus musculus
6MHO_A       514 LQSILSDAWfHFVFFIQAVLVILSVFLYLFaykEYLACLVLAMALGWANMLYYtrgfqSMGMYSVMIQKVILhdVLKFLF 593 Homo sapiens
6PVN_A       513 LQSILSDAWfHFVFFVQAVLVILSVFLYLFaykEYLACLVLAMALGWANMLAYtrgfqSMGMYSVMIQKVILhdVLKFLF 592 Mus musculus
XP_018413136 594 LKSVVSDAWfHILFFIHAVLVIVSLLCCIIgveVYLAFTVIAMALGWTNLMYYtrgfqSLGVYNVMIQKVILndVLKFLL 673 Nanorana parkeri
KFO74380     514 LHSILSDAWfHFAFFIQALLVIFSVFLYLFsykEHLVCLVLAMALGWANMLYFtrgfqSMGIYSVMIQKASLnhVIKFLV 593 common cuckoo
XP_014436837 526 FRSILQINYfYVLFFIQALLVICAHMLCFMqmeVYVIVRVSALVLGWFNILYYfrgfrITGIYTVMVQKMILvdVSRFLL 605 Chinese soft-sh...
XP_018101159 494 LKSVLSDAWfHILFFIQAVLVIVSVFCYLFgvtIYLVFLVLAMALGWLNLLYYtrgfqSLGIYSVMIQKVILndVLKFLF 573 African clawed ...
XP_006010861 449 LKIVLSDAWfHITFFLQAALIIVSSIMCWSslkECVIVLVLGLSLGWINMLYYtrgfeTLGIYSVMVQKVILndVLKFLL 528 coelacanth
Feature 1        #  ## ##  ##  #              #       #  ### #            # #  ##  #  #   #######
6PVL_A       593 VYILFLLGFGVALASLIEKCSkdkkdcssYGSFSDAVLELFKLTIGLGDlniqqnstYPILFLFLLITYVILTFVLLLNM 672 Mus musculus
6DVW_A       593 VYILFLLGFGVALASLIEKCSkdkkdcssYGSFSDAVLELFKLTIGLGDlniqqnstYPILFLFLLITYVILTFVLLLNM 672 Mus musculus
6MHO_A       594 VYIVFLLGFGVALASLIEKCPkdnkdcssYGSFSDAVLELFKLTIGLGDlniqqnskYPILFLFLLITYVILTFVLLLNM 673 Homo sapiens
6PVN_A       593 VYILFLLGFGVALASLIEKCSkdkkdcssYGSFSDAVLELFKLTIGLGDlniqqnstYPILFLFLLITYVILTFVLLLNM 672 Mus musculus
XP_018413136 674 VYVLYLCGFGVALASLIENCPddse-crrYNSFRRAIVELFKLTIGLGDlemqhdskYPVLFLMLLIIYVILTFVLLLNM 752 Nanorana parkeri
KFO74380     594 VYIVFLLGFGVALAALIETCQdgse-chsHSSLGPVLMDLFKLTLGLGDleiqqnskYPVLFLLLLITFVVLTFVLLLNM 672 common cuckoo
XP_014436837 606 VYGVFLVGFGAGLASLMNDCPqdte-csrFHSFHSAVFELFKLTLGLGDlsghedskYPKVFMLLLICYVILTFVLLLNM 684 Chinese soft-sh...
XP_018101159 574 VYILFLLGFGVALASLLEDCKdg----eqCQSLSTTIMELFELTIGLRGlemdnepkYPALFLLLLITFVILTFVLLLNM 649 African clawed ...
XP_006010861 529 VYALFLLGFGVALASLVNTCPdnnd-cspYSSYHTTVLELFKLTLGLGDlelqkhslYPELFLALLVLYVLLTFVLLLNM 607 coelacanth
Feature 1        ####### #                                                              #  #  ###
6PVL_A       673 LIALMGETVENVSKEsERIWRLQRARTILEFEKMLPEWLrsrfrmge--------lckvadeDFRLCLRINEVKWTEWKT 744 Mus musculus
6DVW_A       673 LIALMGETVENVSKEsERIWRLQRARTILEFEKMLPEWLrsrfrmge--------lckvadeDFRLCLRINEVKWTEWKT 744 Mus musculus
6MHO_A       674 LIALMGETVENVSKEsERIWRLQRARTILEFEKMLPEWLrsrfrmge--------lckvaedDFRLCLRINEVKWTEWKT 745 Homo sapiens
6PVN_A       673 LIALMGETVENVSKEsERIWRLQRARTILEFEKMLPEWLrsrfrmge--------lckvadeDFRLCLRINEVKWTEWKT 744 Mus musculus
XP_018413136 753 LIALMAGTVDDISKDsENIWRLQRARTILEYEKSLPTCLrnkfelg---------kicniseNDRLCLRINEVKWTEWHH 823 Nanorana parkeri
KFO74380     673 LIALMGETVEDISKEsEHIWKLQRARTILEFEKFLPKCLrkkfqlge--------rckvaenDTRVCLRINEVKWTEWKT 744 common cuckoo
XP_014436837 685 LIALMGETVNSVSQEsEKIWKLQKAMTILDLERSLPVSWrkwlqrkkihpnmlvgytpdgkeDQRTCLRVNDVNKTYWSN 764 Chinese soft-sh...
XP_018101159 650 LIALMGETVEKISQEsEHIWRLQRARTILEFEKNLPTWLqsrfqlge-------sctvskgdNNRICLRINEVKWTEWNN 722 African clawed ...
XP_006010861 608 LIALMGETVEELSKKsKNIWKLQRARTILDLERRLPPYFrkkfrig---------qfyhfndNHRWCIRINELNWTEFNT 678 coelacanth
Feature 1        ## #  #####
6PVL_A       745 HVSFLNEDPGP 755 Mus musculus
6DVW_A       745 HVSFLNEDPGP 755 Mus musculus
6MHO_A       746 HVSFLNEDPGP 756 Homo sapiens
6PVN_A       745 HVSFLNEDPGP 755 Mus musculus
XP_018413136 824 QVICLNEEPGI 834 Nanorana parkeri
KFO74380     745 HVSFINEDPGP 755 common cuckoo
XP_014436837 765 TLKNMNEDPGP 775 Chinese soft-shelled turtle
XP_018101159 723 HVTCINEEPGL 733 African clawed frog
XP_006010861 679 SVACTEEDPAK 689 coelacanth

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