Conserved Protein Domain Family
SelB

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COG3276: SelB 
Selenocysteine-specific translation elongation factor SelB [Translation, ribosomal structure and biogenesis]
Selenocysteine-specific translation elongation factor SelB is part of the Pathway/BioSystem: Translation factors
Statistics
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PSSM-Id: 442507
Aligned: 225 rows
Threshold Bit Score: 431.26
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_082938185 208 VIVGTAGHIDHGKTTLVKALTGVDTDRLPEEKRRGISIALGYAFMDAGEdLRIGFVDVPGHERLVHTMLSGATGIDHALL 287 
APR80119       7 FVLGTAGHVDHGKTSLVRALTGVDTDRLPEEKRRGITIELGFAPWDLGDgLSVSLIDVPGHRRLVHTMIAGAIGMELLLL 86  
WP_012663876   4 IIIGTAGHVDHGKTSLIEAMTGYNGDELKEEKERGITIDLSFTNMKKGD-TNVAFIDVPGHEKLVKNMISGAFGFDASLF 82  
WP_083772341  13 LIFGTAGHIDHGKSSLVLALTGKDPDRLKAEKEKGITIELGFAGMETEQ-ANISFVDVPGHEGLIKTMIAGSVGFDSVLF 91  
WP_013134797   4 IIIGTAGHIDHGKTALIKALNGFEGDDTNEEKQRGITIDLSFSNLTRGQ-QNIAFIDVPGHEKLVKNMIAGAFGFDYVML 82  
WP_013554757   4 LIVGTAGHVDHGKTALIEAMTGYNGDELAEERERGITIDLSFSNMRREg-VNVAFIDVPGHESLIKNMVSGAFGFDAALL 82  
WP_011138747   4 YIVGTAGHIDHGKTALIRALNGFEGDTTPEEKKRGITVDLSFSNLFLRE-KNIAFIDVPGHEKLVKNMIAGAFGFDAMLL 82  
WP_014770362   4 SIVGTAGHVDHGKTALITALTGFEGDSLEEEKRRGITINLSFSSMQNEA-KNVAFIDVPGHEKLLKNMIAGAFGFDASLV 82  
WP_065535541   1 MIFCTAGHVDHGKTALVRALTGVDTDRLAEERRRGLTIELGFAPLELPGvGRVSLVDVPGHAQFIPTMLSGCGGLDGAVF 80  
WP_119680714   4 LAVGVIGHVDHGKTALVRALTGIETDRLEEEKRRGISIALGFAWLEVPGg-EIDLIDMPGHERFVRTMVAGAAGIRAVVL 82  
WP_082938185 288 LVAADDGVMPQTREHLALLSLLGIRRGTIALTKCDRVDAPTLAQRRGEIRALVAGT--SLADAPIVEVAATTGGGVRELR 365 
APR80119      87 VVAADEGVMPQTREHIAASELLGIRRAVVAVTKLDRVGREVAELAGDEARELLGDR----WEAEVVCCSSRTGEGIEDVR 162 
WP_012663876  83 AIDANEGVMPQTVEHLEVLNILKVKNIIVALTKCDLADPETIEKRKNEIRDLIAKYk-NLHLLEIFETSIYDKQSIEKLK 161 
WP_083772341  92 CVDSREGVRQQTIEHYNIIRTIGVRYCVVALTKTDIASPEQIQSAENGVRKLFAAC--AIKISDIVHTNINDQKSIEKLR 169 
WP_013134797  83 IVSAAEGIKPQTVEHIEIINLLGLKELIVVLTKKDLVSSEELALKKEQILMFLGTF--DFEIKFVSEVSIYDESSIEKLK 160 
WP_013554757  83 VVAADEGIMPQTREHLAVLDLLRVGRLVVGLSKSDRVSPDLLREREAEVREYLAKAhpDLEIIAVLPTSIHDQESIERLK 162 
WP_011138747  83 VVSAVEGIKPQTLEHLHIAHLLEIPTLIVALTKSDLVDQETLLKRESEILNTLKTLp-SLHLHRLLSVSIYDPDSLERLK 161 
WP_014770362  83 VVDANEGLMPQSKEHLEILNLLHVTNIIIALTKKDLASDAVIEERKFEIIEHFKTLk-NLHLVEIIPVSIYEPNSILKLK 161 
WP_065535541  81 TVADDEGPMPQTAEHLDILSLLGLERGVIALTRADLASPAARAEAEARTRALTAGT--FLEGAPRIFVSAVTGEGLEALR 158 
WP_119680714  83 AVSAAEGIRPQTREHVEIAGLLGVEAGVVAVTQCDLADEARAAEVGADAARLLAAH--GMADAPVVHTSALDGRGLPELR 160 
WP_082938185 366 EHLIAEARaLPPREVAGrAFRLAVDRVFSLAGVGTVCTGTAHAGEVAIGDELLLLPPapgqsP--RRGRVRSLHAQNEPA 443 
APR80119     163 SAVRRALArLPPPRSSA-RARLSVDRVFSVKGTGTVVTGTLVEGKIATGAPLFLVGE-----GgvQPTAARGLHVHDQAV 236 
WP_012663876 162 DYLFNLPPr--NITHSK-FFRYYIDRVFSLKGIGTVVTGTVLSGKVKLKDKIYINET-----K--TLTTVKNLQVHGEDV 231 
WP_083772341 170 EAIGRCSTkIHQKIQKR-CYVVRADRVFSIKGSGTVVTGTSLFGQVAPDTLLFNIRN-----M--KAARIKAIQVHDKTV 241 
WP_013134797 161 NQLFTINNs--TKQEEN-FFRFYVDRVFSPKGIGTVVTGTVLGKKVELNEKVFICET-----Q--KETKLKNIQVHNQNV 230 
WP_013554757 163 ELLFALPAr--QAPDAP-FFRYYIDRVFSPRGVGTVVTGTVLSGRVAVGSKVLVAEL-----N--KAATVRRIQVHGEDR 232 
WP_011138747 162 ESLYELSK--PATRDLG-FFRYYIDRSFSIKGAGCVVSGTVLSGKVEQNQKIWCCEL-----Q--KPLAIRGIEVHGSYT 231 
WP_014770362 162 NALFALp--IIPKKSNG-LFRYYVDRSFSIAGAGTVVTGTVLDGSIKVGEKIYAPEL-----E--KEFLIRNLQVHDHDV 231 
WP_065535541 159 AALAAMARqAPP-PPEG-SPRLHVDRVFSVDGSGTVVTGTLTGGPLRRGDRVQLYPG-----E--QTARVRGLQCHGVPA 229 
WP_119680714 161 ATLAELMQrVPAPAEQG-LAYLPVDRTFAVAGFGTVVTGTLQRGRLSVGEEVELTPG-----G--KRARIRALQVHGRQV 232 
WP_082938185 444 ERASAGQRVAIGLAGLEKDEVGRGQWLAAPEIAQWTDRLDVRLRLGPEE--ARALRSGLPVHVHVGAEAVTGTVAVLGrf 521 
APR80119     237 AVAEAPTRLAVNLAGLALEAVHRGDVLTDDRSARVTRVIDVRL----RA--EEAIRRGSSAQIYVGTARSSGRIDLLR-- 308 
WP_012663876 232 EVAYTHQRVAINLN-INHKELKKGYLLSTKGYLRGFKLIDVFVKPVE----GKELFHNMEVLFISGAKRIPGKLLMFN-- 304 
WP_083772341 242 KKSVAGERTAINLPDFSIDDVNRGDILSDNKNIISTRGIFANITVFEGLheKVSLRHNKTYSIYIGALSCEGKLLFYD-- 319 
WP_013134797 231 LEANISNRAALNLQNIDVKSITRGDLITKRGYVRGFDGVDISFSCLK----DKKLMHNKLYSLFIGAKRIEVKALLFD-- 304 
WP_013554757 233 EEAHTHQRAALQLD-IPHTRLRKGYLLASRGYFRGFDRIDVSVRQLG----DDPLPHGSEILFISGAKRVGGKILYYA-- 305 
WP_011138747 232 QSALPSQRAALNLTGVSHTELERGFLLTQKGYLRGFDRIDVEIFPL------EPLSHQLQVQLFIGSKKVEAKILLLE-- 303 
WP_014770362 232 ESAYASQRTAINLQSAQKTSFEKGALLCKKGYIRGFDSADVWLESIG----GHSLKHNSTVIVYVGTKQVEARILFYE-- 305 
WP_065535541 230 EALPAGVRAAVNLAGVRLRDVGRGDTLAAPGALTLTDRADVSLRVLPGA--PFPVRTGSQLHFHHGARALVCRCILLG-- 305 
WP_119680714 233 QQAIPGGRTAVNLRGVESAEVGRGCALATPGLLHASDWLDVHLRALPGD--HRPLETGREYKLLLAAGEIPARLRLLD-- 308 
WP_082938185 522 gtaqaagphpsplpqagegvshaaaalpqagegvspvaaalpqagegvspvaaAEALQ-P-----GEEGLVQLVLHGPIG 595 
APR80119     309 -----------------------------------------------------DVASEaPaeaakGARVVARLRLSSPMV 335 
WP_012663876 305 -----------------------------------------------------PE----------DKKGYATVKLEEKAF 321 
WP_083772341 320 -----------------------------------------------------NKKLA-A-----GERANCFIRLDRPVI 340 
WP_013134797 305 -------------------------------------------------------TID-S-----LEEGFATLKSTEKLY 323 
WP_013554757 306 ------------------------------------------------------------------DERYAALHLNEKVF 319 
WP_011138747 304 -----------------------------------------------------ENPTH-P------NALLATLKCDTPLF 323 
WP_014770362 306 -----------------------------------------------------TEESA-P-------SGYAKLQFKQTLF 324 
WP_065535541 306 -----------------------------------------------------QDVLR-P-----GEAGWAQLRFAQPVA 326 
WP_119680714 309 -----------------------------------------------------REILH-P-----GEAAPAQLRCAGPVA 329 
WP_082938185 596 AWAGDRVVLRDASAT----RALAGGVVLDPQAPARYRRTPQRLSELIALTADSparrlAGlla-----------qaPMGV 660 
APR80119     336 VLGGDRFVMRGSDVDgpagAVLGGGDVLDADPPGRRPRD-KRASVLASLAAGDapatvRAlvd----------eaaPQPF 404 
WP_012663876 322 LVFEDPFVILHNG------RVIGGGEVLNPISDPIKKKK--KLALLKALNKKDfktafEIlvq-----------nhKRGF 382 
WP_083772341 341 PYFDEPLIIRSASPQ----MSIAGGRVLGIEETFPDRKF--AGEILNYLSVHDydnalKKave-----------ifHCGI 403 
WP_013134797 324 TVFGEKIILRNGN------ETVCGGKVLNPVIDPMKKNQ--KRKLLEALDKNDfinayYElls-----------ahRKGL 384 
WP_013554757 320 TRFGDPYLLLASG------RVAAGGEVLIPISEPIRKNR--KLPLLKALEARDfptafSLlla-----------nhRRGF 380 
WP_011138747 324 ALFGERFILREAG------RTLGGGKVLNPIAESMKKRQ--KLELLNALRQEDfaqafRIlls-----------ahKRGF 384 
WP_014770362 325 LVHDEPFILCARG------RTIGGGRVLNPINDPMKKRL--KLELLKALDTKAyqrafTIlvg-----------mhKHGF 385 
WP_065535541 327 AAPGDRFVARFFSPL----ATVGGGVLVDLAPPGKGRMRPERLARLAALAEGRpl--lAAespaapaaaaapapsaEAEG 400 
WP_119680714 330 VPAREGFVLRAGSPA----RTVAGGRVLDPQTRRHRRNDPAVLDRLLSLAGAGpqevvSQllt----------gtgPAGV 395 
WP_082938185 661 DLARFAAGQGVAGDarvallaaagast-------------vvlgadgpawalgAAQTAQWEAVALAR-----LAQYHEDQ 722 
APR80119     405 PQTALAARFSLSAAelrraadaltgkg--------------elaalkgsgwmaAARLVDLAITARSL-----VAEHHKKA 465 
WP_012663876 383 GLLQSYQRFNLTPAealeiakqldnv----------------fideenynifsMDVKKEIEKVIKDT---------YEKN 437 
WP_083772341 404 KLPEPIQFSGLIRNelamklaqln-------------------ianfqgfildSRNLETFVENT--------IQSLNKKG 456 
WP_013134797 385 GIISSTQRFALSHEealefakkldev----------------fvdekdliiypNSTKDELKDYIKNI---------YKKN 439 
WP_013554757 381 GLISSAQRFALNHEealeiargiega----------------fldeadlvlypAEALGEVENAVRRI---------YETN 435 
WP_011138747 385 GIISTLQRFAISQQealeiakslpea----------------fvdekelvlfpQESLQILQEEVKAL---------LKKN 439 
WP_014770362 386 GLISSNQRFGLNHDeaiaiaremehv----------------fvdekglvlypLEVEHELETIIRGI---------YAKN 440 
WP_065535541 401 ELEALYLGYGLEPPpwarveprfagrirearracrrlkergvllelspghllhAGAVRVAEARLRGRfgsasFSLAQARD 480 
WP_119680714 396 LLDEAARLSGHAPSwviswlpelq-------------------arqvgpllvtAAALEGLKRDIRTA-----LAEHHHSA 451 
WP_082938185 723 PEE-L--------------GPDLARWRRLA 737 
APR80119     466 PLD-R--------------GLGLSTLRQKL 480 
WP_012663876 438 RFA----------------FLSPASLKLRL 451 
WP_083772341 457 VLA----------------ISKIQHTCEQL 470 
WP_013134797 440 AYA----------------MLSNASISLRV 453 
WP_013554757 436 PRA----------------LLAPASVTlri 449 
WP_011138747 440 KKA----------------LLSPASLGLKA 453 
WP_014770362 441 SYA----------------LLSATSLSLKL 454 
WP_065535541 481 ALGcSrrcallllehwdasGVTRRQGEVRI 510 
WP_119680714 452 PAS-P--------------GLMFEDVLDRL 466 
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