4EDL


Conserved Protein Domain Family
CH_PARVB_rpt2

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cd21338: CH_PARVB_rpt2 
second calponin homology (CH) domain found in beta-parvin
Beta-parvin, also called affixin, is an adapter protein that plays a role in integrin signaling via ILK and in activation of the GTPases Cdc42 and Rac1 by guanine exchange factors, such as ARHGEF6. It is involved in the reorganization of the actin cytoskeleton and the formation of lamellipodia and also plays a role in cell adhesion, cell spreading, establishment or maintenance of cell polarity, and cell migration. Beta-parvin contains two copies of the CH domain. This model corresponds to the second CH domain. CH domains are actin filament (F-actin) binding motifs.
Statistics
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PSSM-Id: 409187
Aligned: 7 rows
Threshold Bit Score: 232.555
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actin
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                             #   #                                                     #
4EDL_A         4 GRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQ 83  human
Q9HBI1       235 GRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHHFYLTPESFDQ 314 human
OCT88053     183 GKFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHNFYLTPEGFEQ 262 African clawed ...
PKK30243     242 GRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHNFYLTPESFDQ 321 rock pigeon
XP_014353363 236 GRFERDAFDTLFDHAPDKLNVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLYSFYLTPESFDQ 315 coelacanth
NP_956020    236 GRSERDAFDTLLDHAPDKLNVVKTSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLENYFVPLYNFYLTPENFEQ 315 zebrafish
XP_007892803 237 GRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLENYFVPLHNFYLTPESFDQ 316 elephant shark
Feature 1         ##  ## #        #########    # ## ##  ##  #      
4EDL_A        84 KVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKNVE 133 human
Q9HBI1       315 KVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKNVE 364 human
OCT88053     263 KVHNVAFSFELMQDGGLKKPKARPEDIVNLDLKSTLRVLYNLFTKYKHLD 312 African clawed frog
PKK30243     322 KVHNVSFAFELMQDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKNVE 371 rock pigeon
XP_014353363 316 KVHNVAFAFELMQDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKNVE 365 coelacanth
NP_956020    316 KVHNVAFAFELMQDGGLQKPKARPEDVVNLNLKSTLRVLYNLFTNYKNSE 365 zebrafish
XP_007892803 317 KVHNVSLAFELMQDGGLKKPKARPEDVVSLDLKSTLRVLYNLFTKYKNVE 366 elephant shark

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