Conserved Protein Domain Family
Lrp

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COG1522: Lrp (this model, PSSM-Id:224439 is obsolete and has been replaced by 441131)
DNA-binding transcriptional regulator, Lrp family [Transcription]
Statistics
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PSSM-Id: 224439
Aligned: 250 rows
Threshold Bit Score: 32.7421
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15790696   3 MDIGDLDDRDRAVLNAFQGGFPvv-qRPFEPAAEALRsrgveFSATELRDRVRTLDENGVLTRFGALINAE------EIg 75  Halobacterium sp. N...
11499043   1 -----MDEKDRKIISILQQNGK----ATLSQIAEKMG-----MSAMGVKKRLDKLEKGKIKLTPLLNVEELg-----IIt 61  Archaeoglobus fulgidus
11500038   3 QITSRAALVGFKAVNVREVAAKinvhDEFRVKHNFLRdayynVWFTVKGRDVEEIEALVISLAEECGVEEYvvlptkRVy 82  Archaeoglobus fulgidus
14600965   1 -----MYTGNARTSRAARRGAQ----QGMVRNVEVYE-----KRALELIKQTEGILQSELWKLLGLDSRE---------- 56  Aeropyrum pernix
20093920 227 LPGVPPEADAERILSILALNPR----KRIVQFNPAQDpargpLSPLDRLELIYKTVRSKLPEDVLVKSCCIspmtwsPLy 302 Methanopyrus kandle...
18203528   1 MTNASLDDLDRAILKLLKKDAR----LTIAEISNQLK-----KPESTVHFRIKKLQERGIIEKYTIIVGEP------IK- 64  Pyrococcus abyssi
18203546   1 --MRKLDKVDIQLVKILSQNSR----LTYRELAELMN-----TTRQRIARRITKLKKLGVIKKFTIIPDLD------KL- 62  Pyrococcus abyssi
18202080   1 MISTPLDDLDRAILKLLKKDAR----LTIAEISNQLK-----KPESTVHFRIKKLQERGVIEKYTIILGEP------IR- 64  Pyrococcus horikoshii
15898669   1 -----MDIIDKRILFYLLKDGR----ISQRRIASLLN-----LTPASLNYRFKKLTDSGILKGFKLYVNPNffgkyqIFi 66  Sulfolobus solfatar...
15899311   1 -----MDSIDKGILKILLKDAR----TPQRKIAIMLG-----ISPPAVSYRMEKLFGDI-IKRFTVYVNPNfl---gRYh 62  Sulfolobus solfatar...
15790696  76 GAAslvamhapehrfdeiadtVNdiQAVAHNYERehphlnm-wfvvsvADREVADVLAEIEAEtgqe------------- 141 Halobacterium sp. N...
11499043  62 -------------------------AVVAMEVES---------------SDALRKIIEKFRDC----------------- 84  Archaeoglobus fulgidus
11500038  83 KMDvkydltkgvswsnrglepESvpLLRELGFEEdfvralesldvaerPFAKFNRPEEEVVDIieelmrkgvgrdf-sgv 161 Archaeoglobus fulgidus
14600965  57 GSR----------------------IVLRLARKG------------------IIRREQVVING----------------- 79  Aeropyrum pernix
20093920 303 DIRr-----------------YLdkVVCMLGIECr--------------EYDGCPFTGRVLEQ----------------- 334 Methanopyrus kandle...
18203528  65 PRK------------------LAl-VVLEIDMPI--------------IEDFLERYIEYVTKT----------------- 94  Pyrococcus abyssi
18203546  63 GYM------------------YAf-VLVKLRVPS--------------EVDAMISEISNVEYV----------------- 92  Pyrococcus abyssi
18202080  65 PRE------------------LAl-VVLEVDKPI--------------IEDFLDRYMEYVTKT----------------- 94  Pyrococcus horikoshii
15898669  67 AFKnysdidad--wisfklkcLEwlNVYGIYASDntelkdkisymtknLGDPVLSYFPVQSLFrasnldqkiveil-kid 143 Sulfolobus solfatar...
15899311  63 GYVafnnlydwdgdyiakiecLEeiNVYEIDSKSrv-----------eLDEKIRKMSEKLGEPrmiyipnqmpyspskfd 131 Sulfolobus solfatar...
15790696 142 ------tynlPKqqefrVEAKFLVDGpip------dgDVDLSHLGTTPEPTGRDTLTpa-------------eRDLVVAV 196 Halobacterium sp. N...
11499043  85 ----------PR-----IIKFFVTTG-----------SYNLFALIYAEDYHSLESITlekcslrsqpgirrydIFPIQEI 138 Archaeoglobus fulgidus
11500038 162 lrerkvgfreNGmtvlkLSAKPEKVAmqll----erfPQITHLIERVVSEKWNYPIYfmvh---------avtREPIEEI 228 Archaeoglobus fulgidus
14600965  80 ----------RK-----TYRLFPAEPt---------dRKKLNIIVDIGSILDIPCVV----------------CPYIDEC 119 Aeropyrum pernix
20093920 335 -----------R-----IMNELYEKGs---------vSTEELARRLRIARSRLKRRL-----------------ESMESR 372 Methanopyrus kandle...
18203528  95 ----------LS-----GFSEVLFVAks--------gKEKIVALVGGESEESLLKFI----------------EDNIESI 135 Pyrococcus abyssi
18203546  93 ----------KE-----IEKGVGRYN-------------LIVRLLLPKDLKEAEGII----------------NEFLQKI 128 Pyrococcus abyssi
18202080  95 ----------LS-----GFPEVLFVAks--------gKEKIVALVGGEDRDKLLKFI----------------EENIESI 135 Pyrococcus horikoshii
15898669 144 prlssseiskKInvnsrIIEKHIRYLr----------HRGLILVAPQIDLGKTDIIIfsif---------sknIDEISVV 204 Sulfolobus solfatar...
15899311 132 lkvvsilkekPLikpieLAEELGVSSktirrhlrylySKKFIRLIPIIDLNKAEISIfavftskvedgknffaKYAFTEI 211 Sulfolobus solfatar...
15790696 197 qd----------glPVV-ETPYCAVADDIGRDPewvvatlRRFNE 230 Halobacterium sp. NRC-1
11499043 139 fydsyldikvvaekERE-DAPCGVFCGDCYRYEsnrclgcPATKF 182 Archaeoglobus fulgidus
11500038 229 rarv-------teiEGV-EAAETIYSRANLREV------------ 253 Archaeoglobus fulgidus
14600965 120 g-------------EGGfYSPESCRLIDEWVHGr----------- 140 Aeropyrum pernix
20093920 373 ---------------GLiRRTESGWTIARRTS------------- 389 Methanopyrus kandleri AV19
18203528 136 --------------PTL-RNVMVFPISEIKKGDeia--gfLAEV- 162 Pyrococcus abyssi
18203546 129 --------------KNA-ESVEVVLISEIKKFEii---------- 148 Pyrococcus abyssi
18202080 136 --------------PTL-RSVQVLPISEIKKGDeis--gfLAEV- 162 Pyrococcus horikoshii
15898669 205 lqecklwqftdgyaGITvCYADNMERARKYIDLarqidntADVMI 249 Sulfolobus solfataricus
15899311 212 eddkag--ifvnvvDSMdEARDLALKFKREYDKdaeimitTKYEF 254 Sulfolobus solfataricus
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