Conserved Protein Domain Family
Lsr2
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pfam11774: Lsr2 (this model, PSSM-Id:403087 is obsolete and has been replaced by 432065)
Lsr2
Lsr2 is a small, basic DNA-bridging protein present in Mycobacterium and related actinomycetes. It is a functional homolog of the H-NS-like proteins. H-NS proteins play a role in nucleoid organisation and also function as a pleiotropic regulator of gene expression.
Links
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Statistics
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PSSM-Id: 403087
Aligned: 151 rows
Threshold Bit Score: 72.1656
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
goetting:GPOL_174p00350   1 MAKKQTVAFIDDLDGREIDIddahTVSWAWSGVDYQLDVSAMNLDKIengRVPLAKLLTASTRvggrrqstapkihtapk 80  Gord...
WP_011727381              1 MGKIVTIDYIDDLDGVPIDEkdvdTVEFSYRGEDYTLVLTTKNGAQF---NKDIARYIKAAKKakad----------dgr 67  Myco...
CeBiTec:CVAR_2826         1 MARREVTQFFDDLDGTALSAddvnVVEFSYAGSDYTLDLSEDNALKF---AIDLEPYLKVATKvakt-----------rs 66  Cory...
WP_038550531              1 MARREVTQFFDDLDNTPLTAdevnVVEFSYKGSTYVLDLSEENAQKF---ADTIEPYIAAGTKvtr-------------t 64  Cory...
CeBiTec:CGLY_15650        1 -----mITYVDDIDQEELAPdevrTVKFGYRGADYVLDLSELNAAIL---DEELEPYLGAARKlpkna---------sag 63  Cory...
cebbi:ckrop_0104          1 MARRYVPQIFDDLDGTELTEsdatEIHFSVDGTAYMLEVSEDNARKF---HEALEPFISSATKesgr-----------gr 66  Cory...
CeBiTec:A605_13340        1 MARREITQYFDDLDNTPITEeqvhVVRFSVDGNDYILDLSEKNAREF---REILEPFVQAARPa---------------- 61  Cory...
CeBiTec:B843_12420        1 MARREVTQIFDDLDNSPLEEkdvrVIRFSVNGTDYVLDVSEKNAAAF---HAQLAPYINAARKv---------------- 61  Cory...
ADL11445                  1 MARREITQFFDDIDNTPLDEsevrVISFSFDGEDFTIDLSEENAEKF---REAIRPYT---------------------- 55  Cory...
PRJNA209048:CARG_09370    1 MARQSIIQYIDDLDNTPISEselsEVHFSYQGVDYVIDLGPKNASAL---YDALKPYIANARRe---------------- 61  Cory...

goetting:GPOL_174p00350  81 pATTASAGSGADFPGPATREIRRWATDAGYEVPARGKLPQSILDAYTAA 129 Gordonia polyisoprenivorans VH2
WP_011727381             68 vTRKAARARKPAEAKAASK-----AESNGTSNGVSKRASNRALKAaaak 111 Mycolicibacterium smegmatis
CeBiTec:CVAR_2826        67 tRSRSTGAAAPKSDPNRNKRIREWARDNGHTVSARGQISHEIISAYEEA 115 Corynebacterium variabile DSM 44702
WP_038550531             65 rGRGRPSSNAGKSDSGRNRRIREWARDNGLSVSSRGQIAREVIEAYESA 113 Corynebacterium glyciniphilum
CeBiTec:CGLY_15650       64 tGRSSSTSSSSASDAARNRRIRQWANDNGREVSARGKIAADVISDYEAA 112 Corynebacterium glyciniphilum AJ 3170
cebbi:ckrop_0104         67 rRSSYRNNVSSEATKARNRAIRKWANENGYHVAPRGQIKKEIIEAYDRA 115 Corynebacterium kroppenstedtii DSM ...
CeBiTec:A605_13340       62 ----pSAHGRGGGARVHPREIRRWAQSQGKAVANRGKIPHEIIAAYNEA 106 Corynebacterium halotolerans YIM 70...
CeBiTec:B843_12420       62 --pSLRGRKPGAIAPYDPREVRQWASKNGYAVARRGKISQEIIDAY--L 106 Corynebacterium vitaeruminis DSM 20294
ADL11445                 56 -EKASRTMSQRTPVGHDPKDVRQWAKSKKIDIAARGKIPQEVIDAYVQA 103 Corynebacterium pseudotuberculosis ...
PRJNA209048:CARG_09370   62 -QKSGRKSAPVAQRQAENRAIRRWALDNGHRVSTRGKIPQDVIDAYHAA 109 Corynebacterium argentoratense DSM ...
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