Conserved Protein Domain Family
PLN03111

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PLN03111: PLN03111 
DNA-directed RNA polymerase II subunit family protein; Provisional
Statistics
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PSSM-Id: 215582
Aligned: 39 rows
Threshold Bit Score: 255.208
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
160331077   1 METDYKEILNLFKIRRTILQMLRDRSYVVfeNQDDLEMSRSSFEQKFVKnfQVIRSELEINRSKWLEENMRILVVFIEGE 80 
242069947  59 DLGGSVESKRLFLARRTALEMLRDRGYAV--PEDELARTLPEFRAWWED--KPELERLAFSTTLASDPSSKVKVVFCPPE 134
224139746  12 VDEGSTESHRYYLSRRTVLEMLKDRGYSV--PSSEIDISLQDFRGVYGQ--NPDIELLKFSATHKSDPSKRMLVIFCGLG 87 
225441278  25 VDEGRIESHRYYLARRTLLEMLRDRGYSI--PALDIDISLQDFRSFYSQ--KPDPDRLRISAALRSDPSKKILVIFCGPD 100
15230206   18 VDLSSEESHRYYLARRNGLQMLRDRGYEV--SDEDINLSLHDFRTVYGE--RPDVDRLRISALHRSDSTKKVKIVFFGTS 93 
15227327   14 ISKSSVECHKYYLARRTTMEMLRDRGYDV--SDEDINLSLQQFRALYGE--HPDVDLLRISAKHRFDSSKKISVVFCGTG 89 
115487264  23 IDRGSVESHRLFLARRTAMEMLRDRGYSV--PEAEIARTLPEFRAWWAE--KPGIERLAFTTTLVSDPSKKVQLVFCPPE 98 
115484123  23 IDRGSVESHRLFLARRTAMEMLRDRGYSV--PEAEIARTLPEFRAWWAE--KPGIERLAFTTTLVSDPSKKVQLVFCPPE 98 
297817026  18 VDPSSEESHRYYLARQNALQMLRDRGYQV--SDEDINLSLHDFRAVYGE--RPDVDRLRISAQHRSDSSKKVKVVFFGTG 93 
297824079  14 IDKPSVECHKYYLARRTTMEMLRDRGYDV--SDEDVNFSLEQFRALYGE--RLDVDRLRISAKHRFDSSKKIMVVFCGTG 89 
160331077  81 KeksaIGVKSIRGFCE-RIKQDGFQNSIIVLHGKLTSHAKQAINSInslDDKIEYFSESELIVNITEHNLVPKHEIISEE 159
242069947 135 P----VKIAAIRVVYT-GVKDENLSRLILILQGRIMSKAREAIKEIf--PYKVDTFQITELLVNITKHALKPKHQVLTAE 207
224139746  88 V----VKVGMIRLITVqITDRDSLTGLILVLQNNITNQAMKALDLF---KFKIEIFQITDLLVNITKHILKPKHQVLSEQ 160
225441278 101 V----VKVNAIRSIATqIVNKDSLSKLILVLQNHITSQALKAVDLF---SFQVEKFQITDLLVNITKHVLKPKHRVLTDQ 173
15230206   94 M----VKVNAIRSVVAdILSQETITGLILVLQNHVTNQALKAIELF---SFKVEIFQITDLLVNITKHSLKPQHQVLNDE 166
15227327   90 I----VKVNAMRVIAAdVLSRENITGLILVLQSHITNQALKAVELF---SFKVELFEITDLLVNVSKHVLRPKHQVLNDK 162
115487264  99 P----VKIATIREIYL-QTKEENLSRLVLILQSKILSRAREAIKEIf--KFKVDIFQATDLLVNITKHVLKPKHEVLSAD 171
115484123  99 P----VKIATIREIYL-QTKEENLSRLVLILQSKILSRAREAIKEIf--KFKVDIFQATDLLVNITKHVLKPKHEVLSAD 171
297817026  94 M----VKVNAIRSIAAdVLSQETVTGLILVLQSQVTKQAMKAIELF---SFKVEIFQITDLLVNITKHALKPQHRVLNDK 166
297824079  90 M----VKVNAMRAIAAdVLNRESITGLILVLQSHITNQALKAVELF---SFKVELFEITDLLVNVTKHVLRPKHQVLNDK 162
160331077 160 EARCLFKRYSIRENQLPRINKRDPIARYFGLQKNQIMKIIRSSETSGRYVTYRRCT 215
242069947 208 EKAKLLKEYNVVDSQLPRMLENDAVARYYGLGKGTVVKVIYDSELTGNHVTYRCIF 263
224139746 161 AKQRLLKKYSIEEKQLPRLLKKDAISRYYGLERGQVVKVTYDGDITGSHVTYRCVW 216
225441278 174 EKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCVW 229
15230206  167 EKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTESHVAFRCVW 222
15227327  163 EKESLLKKFSIEEKQLPRLSSKDPIVRYYGLETGQVMKVTYKDELSESHVTYRCVS 218
115487264 172 QKAKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVVKVTYDGELTGKRVAYRCVF 227
115484123 172 QKAKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVVKVIYDGELTGKRVAYRCVF 227
297817026 167 EKTTLLKKFSIEEKQLPRISKKDAIVRYYGLEKGQVVKVNYRGELTESHVAYRCVW 222
297824079 163 EKESLLKKYSIEEKQLPRLSSKDPIVRYYGLETGQVMKVTYKDELSESHVTYRCVM 218
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