Conserved Protein Domain Family
psbB

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CHL00062: psbB 
photosystem II 47 kDa protein
Statistics
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PSSM-Id: 214350
Aligned: 172 rows
Threshold Bit Score: 798.516
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
301500955   1 MALPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELSVFDPSDPVLNPMWRQGMFVLPFMARLGVTESWNGWSL 80 
71842254    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSI 80 
118410992   1 MALPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSI 80 
11467517    1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSI 80 
118411113   1 MALPWYRVHTVVLNDPGRLISVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSI 80 
11467747    1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMYVMPFMARIGVTDSWGGWSI 80 
299830531   1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSI 80 
11465509    1 MALPWYRVHTVVLNDPGRLISVHLMHTALVSGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSI 80 
299830326   1 MALPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMTRLGITDSWGGWSI 80 
30468148    1 MALPWYRVHIVVLNDPGRLISVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMPFMARLGVTDSWGGWSV 80 
301500955  81 LGDtDLEavpiyavdestgvvdqifqflvsrGPGIWSVEGVAVSHIILSGLLFLAAIWHWTFWDLDIFRDPESNQLVLDL 160
71842254   81 TGE-SVS------------------------NPGIWSFEGVALTHIVLSGMCFLAAIWHWVYWDLELFRDPRTGEPALDL 135
118410992  81 TGE-SVS------------------------NPGLWSFEGVALSHIVLSGMCFLAAIWHWVYWDLELFRDPRTGEPALDL 135
11467517   81 TGE-SVS------------------------NPGIWSFEGVALSHIILSGMCFLAAIWHWVYWDLELFRDPRTGEPALDL 135
118411113  81 TGE-SVS------------------------NPGLWSFEGVALSHIVLSGMCFLAAIWHWVYWDLELFRDPRTGEPALDL 135
11467747   81 TGE-SVS------------------------NPGFWSFEGVALAHIGLSGLLFLAAVWHWVYWDLELFRDPRTGNPALDL 135
299830531  81 TGE-SVS------------------------NPGIWSFEGVALSHIILSGMCFLAAIWHWVYWDLELFRDPRTGEPALDL 135
11465509   81 TGE-SVS------------------------NPGLWSFEGVALTHIVLSGLLFLASIWHWVYWDLDLFRDPRTLEPALDL 135
299830326  81 TGE-SVS------------------------NPGIWSFEGVALSHIILSGMCFLAAIWHWVYWDLELFRDPRTGEPALDL 135
30468148   81 TGE-NVV------------------------NPGLWSFEGVALTHIVLSGLLFLASIWHWVYWDLELFRDARTGEPALDL 135
301500955 161 PLVFGIHLALASFLCLGFGGFHVAGLFGPGIWVSDAYGLSAAVKPVQPEWGPDGFNPFNPGGVAAHHIAAGILGIIASVF 240
71842254  136 PKIFGIHLFLSSLLCFGFGAFHVTGTFGPGIWVSDAYGITGRVQAVAPAWGAEGFNPFNPGGIASHHIAAGILGLLAGVF 215
118410992 136 PKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGITGKVQPVAPSWGADGFNPFNPGGIAAHHIAAGLFGILAGVF 215
11467517  136 PKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDAYGVTGKVQPVAPAWGADGFNPFNPGGIAAHHIAAGIFGIFAGIF 215
118411113 136 PKIFGIHLLLSGLLCFGFGAFHVTGLFGPGIWVSDAYGITGKVQPVAPSWGADGFNPFNPGGIAAHHIAAGIFGIFAGIF 215
11467747  136 PKIFGIHLVLAGLLCFGFGAFHVTGAWGPGIWVSDAYGITGKVQPVAPTWGPEGFNPFNPSGVASHHIAAGILGFIAGIF 215
299830531 136 PKIFGIHLFLSGLACFGFGAFHVTGLFGPGIWVSDAYGITGKVQPVAPAWGADGFNPFNPGGIAAHHIAAGIFGIFAGIF 215
11465509  136 PKVFGIHLVLSSLLCFGFGAFHVTGLFGPGIWISDAYGLTGRIQSVAPAWGPEGFNPFNPGGIASHHIAAGTVGILAGVF 215
299830326 136 PKIFGIHLFLSGLACFGFGAFHVTGLFGPGIWVSDAYGITGKVQPVAPAWGADGFNPFNPGGIAAHHIAAGIFGIFAGIF 215
30468148  136 PKIFGIHLLLASLLCFGFGAFHVTGVFGPGIWVSDAYGLTGKVQPVAPAWGPEGFNPYNPGGVASHHIAAGTVGILAGVF 215
301500955 241 HLSVRPSERLFKLLRMGNIETVLSSSIAAVFFAAFVTSGTMWYGSATTPVDLFGPTRYQWDSGYFQQEVERQVENNLRRG 320
71842254  216 HLTIRPPQRLYRALRMGNIETVLSSSISAVFFAAFITSGTMWYGAATTPIELFGPTRYQWDSGYFQQEIERRVESSLSEG 295
118410992 216 HLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVEASVSEG 295
11467517  216 HLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVETSVSEG 295
118411113 216 HLTVRPPQRLYRALRMGNIETVLSSSISAVFWAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVESSVTEG 295
11467747  216 HIAVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITTGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSLNEG 295
299830531 216 HLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVEASVSEG 295
11465509  216 HLNVRPPQRLYRALRMGNIETVLSSSIAAVFFASFVVSGTMWYGAASTPIELFGPTRYQWDSGYFQQEIEKRVEESLSNG 295
299830326 216 HLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVEASVSEG 295
30468148  216 HLNVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDSGYFQQEMERRVQANVSQG 295
301500955 321 YSLTEAWSLVPDKLAFYDYVGNNPAKGGLFRAGPMNKGDGIAQAWLGHPIFRTKDGNELTVRRMPSFFETFPVILVDKDG 400
71842254  296 LSLSQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDG 375
118410992 296 LSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDG 375
11467517  296 LSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKDGRELTVRRMPAFFETFPVILVDKDG 375
118411113 296 LSESQAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMDKGDGIAEAWLGHPIFRDKDGRELTVRRMPAFFETFPVILVDKDG 375
11467747  296 LSLSEAWSRIPDKLAFYDYVGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFPVILVDKDG 375
299830531 296 LSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDG 375
11465509  296 LSLPEAWSNIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGHELIVRRMPAFFENFPIILVDKDG 375
299830326 296 LSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFPVILVDKDG 375
30468148  296 ASLAEAWSKIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAQAWLGHAVFQDKQGRELTVRRMPAFFETFPVILVDKDG 375
301500955 401 VVQADIPFRRAESKYSIEQVGVSVQFLGGKLNGQKFDDPTTVKKFARKAQLGEMFQFDRVTLQSDGVFRSSPRGWYTFGH 480
71842254  376 IVRADIPFRRAESKYSIEQVGVSCNFYGGKLNGQVFTDAPTVKKYARKSQLGEVFEFDRTTLESDGVFRSSPRGWYTFGH 455
118410992 376 IIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKSQLGEVFEFDRTSLESDGVFRSSPRGWYTYGH 455
11467517  376 IIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH 455
118411113 376 IIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH 455
11467747  376 IIRADIPFRRAESKYSVEQVGVTVSFYGGKLNGQTYTDAPTVKKYARKAQLGEVLEFDRTTLESDGVFRSSPRGWYTFGH 455
299830531 376 IIRADIPFRRAESKYSIEQVGVTVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH 455
11465509  376 IIRADIPFRRAESKYSIEQVGVTCSFYGGKLNNQSFKDASTVKKYARKAQFGEVFEFDRTILDSDGVFRSSPRGWFTFGH 455
299830326 376 IIRADIPFRRAESKYSIEQVGVSVDFYGGKLNGQTFKDAPTVKKFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGH 455
30468148  376 IVRADIPFRRAESKYSIEQVGVTCQFYGGKFNGQKFTDAASVKRYARKAQLGEVFEFDRSSLDSDGVFRTSPRGWFTFAH 455
301500955 481 LNLALLFYFGHLWHGGRTLFRDVLTGIGADVVKQVEFGAFQKLGDETTelsR 532
71842254  456 ANFALLFFLGHLWHGGRTLFRDVFAGIGAEVLEQVEFGAFQKLGDKST---K 504
118410992 456 ANFALLFFFGHLWHGGRTIFRDVFTGIGAEVTEQVEFGVFQKLGDKTT---K 504
11467517  456 ANFALLFFFGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDKST---K 504
118411113 456 ANFALLFFLGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDKTT---K 504
11467747  456 ANFALLFFLGHLWHGSRTLFRDVFSGIGAEVTEQVEFGAFQKLGDRST---K 504
299830531 456 ANFALLFFLGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDKST---K 504
11465509  456 ANFALLFFFGHLWHGSRTLFRDVFAGIGAEVTEQVEFGVFQKVGDKTT---K 504
299830326 456 ANFALLFFLGHLWHGGRTIFRDVFTGIGAEVTEQVEFGAFQKLGDKST---K 504
30468148  456 ANFALLFFFGHLWHGARTIFRDVFAGIGAEVTEQVEFGVFQKVGDRST---K 504
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