Conserved Protein Domain Family
Yip1

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pfam04893: Yip1 (this model, PSSM-Id:398520 is obsolete and has been replaced by 461468)
Yip1 domain
The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterized by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases.
Statistics
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PSSM-Id: 398520
Aligned: 217 rows
Threshold Bit Score: 29.7119
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012659681   13 SGLLDRSRAGFRWLKPD--KQALTVGVVVFVtLAttLGIVALGAAFDATIDREVTVdnpdyppestcetfgedgdsvfve 90  Halorubrum lac...
jgi:Caur_3861 474 FRFISKPADSFSYIKTGerGSLGFALGIY---LW--VIVVYVLSLYLMGFPFNAYA------------------------ 524 Chloroflexus a...
jgi:Fnod_1595 341 KNILKHPLDTFYYIQKKrhGSVLSASIIY---LL--FLIVVLFDYFGRSFIFNLNT------------------------ 391 Fervidobacteri...
jgi:Fnod_0291 470 KNILRHPLDTFYYLQKKkhGSVLSASIIY---LM--FLLVILVDYFGRSFIFNLNT------------------------ 520 Fervidobacteri...
Q3EV92         16 FSIWIKPRDTMKEIFIS--KPKNVFLLIL-------LGSFVQTLDRASSKNVGDSI------------------------ 62  Bacillus thuri...
EAR10656       13 FSIWTQPRATIRQII----RTNPKQSVIL-------LAALGGFAEALDRASYKDAG------------------------ 57  Reinekea bland...
Q2SI34         30 FSMWLQPRATIQQIIDD--DPVHLVIGLTCMaSV--LMRIKEASLYKMAEYMGLMS------------------------ 81  Hahella chejue...
Q7UH00         35 KSIWLSPRRTVRQIIST--DPTLHVVLLACFsGI--GETLDRASMRDLGDRLPLPA------------------------ 86  Pirellula sp.
EAZ83522       33 ISVWLHPKQTARYMINE--KSIGFAILIMSIgYI--GSIMSGLTDSEFFTDLSPWL------------------------ 84  Bacillus sp. B...
Q5WAD2         31 FKVWIRPRQVVADELKTarEKKQTWNYLLIA-YV--SAVLSTFTNFSSGVVPTFAY------------------------ 83  Bacillus claus...
WP_012659681   91 qcdrperiDVDVGEELRSASGEYvgyaLIgvpIWWAIFALALHGGaRLAgGSGSLGd----S-FAIAA--WA-IaaeVAR 162 Halorubrum lac...
jgi:Caur_3861 525 --------YPSQIRVENEIIVPI---------VLLGLWNVANYLVsTISdGEGRVRd----V-VIGTA--YS-L---FPY 576 Chloroflexus a...
jgi:Fnod_1595 392 ----------NERSVGFVILTAA---------APVGLWVISNWLVsSINdGKGTLRd----I-YIFTA--YT-F---APY 441 Fervidobacteri...
jgi:Fnod_0291 521 ----------SDRNVGFVLLTSS---------SILFLWIISNWLVsSINdGKGTLRd----I-YVFTA--YS-F---APY 570 Fervidobacteri...
Q3EV92         63 --------SSPVSIISMVIFGTF----VAfliYYFLLPALFNWVA-KKLgGQGTFEk----TrYSVA---YS-Y---IPY 118 Bacillus thuri...
EAR10656       58 ----------DDFSVVMIVLMAMslgaLGgilAMYVYGWLLSWTG-NWInGQGHREe----I-RAAIA--WA-N---VPV 115 Reinekea bland...
Q2SI34         82 ------------LLGVCIVVGCV----LGv-iWLYIGAPFIQWVG-KWFgGRGSQDe----I-RAAIA--WS-C---IPA 132 Hahella chejue...
Q7UH00         87 -------------IIAVAVILGP----IGgliGVWIGAWLVAITG-KWMgGKGTSEt----V-RTALT--WA-S---IPS 137 Pirellula sp.
EAZ83522       85 -------------LALLCIIFAP----IAgiiGTAISALITWLFG-KLFkGTGTYSdlfkgLsLTAVP--FIvL---IPF 141 Bacillus sp. B...
Q5WAD2         84 --------VIVFALLTSIVVAPI---------SLYVLSWLYKWVG-SWLgGKGTALd------LRVATvhTS-M---IPL 135 Bacillus claus...
WP_012659681  163 LVaglGAIWYVLAtttvegtt-------mesiateIVAAis----tMQGPLlvasavVISVQWVVVVGGLEAYHDLDRG- 230 Halorubrum lac...
jgi:Caur_3861 577 ALfmpLVIALSNVltl----------------neaFLVSfs----qQLIWG--------WTGLMLFIMVREIHNYTLSEt 628 Chloroflexus a...
jgi:Fnod_1595 442 ILfqpLVILSTYIlty----------------netFLIDfa----sLIIIS--------WVGVLLFTGVKEIHDYNIRNt 493 Fervidobacteri...
jgi:Fnod_0291 571 ILfqpLVILSTYVlty----------------nekFLIDfa----sMFLIS--------WSAVMLFTGVKETHDYDIKNt 622 Fervidobacteri...
Q3EV92        119 VYsliLVWVPSFFlfgienftsetpemdssitltiLFLIf-----aIIDIVi-----GIWTIIISLKCLGEAHQFSAWK- 187 Bacillus thuri...
EAR10656      116 IWallLWIPQYALigremfmaeaysltestttfvlFFGLa------VIEVIl-----GIWAFIIFLKCLGEVQGFSAWK- 183 Reinekea bland...
Q2SI34        133 LWgslLIMLEMMLygremfl---------gaeardYNLVdl---kiRAAFSvahgiiGIWGAITFTKALAQVQGYSIWK- 199 Hahella chejue...
Q7UH00        138 IVasiLWIPQLLLlreelftsetprlesnpglivpVLALs------LVEIVl-----AVWSFVLMCNTIAEVQSFGSAWr 206 Pirellula sp.
EAZ83522      142 YLiw--lFTSPESlldpnfm--------gslpwifWPAI-------LASIVv-----TIWSFVISVGVVAEAHQISNWMa 199 Bacillus sp. B...
Q5WAD2        136 IIhglISIPFILVigetyywfdlesillgieialsPLQLwaqnilgLISLTa-----GIWTFVLLMHGIGEAHQFSAWK- 209 Bacillus claus...
WP_012659681  231 IAGTVagv--lavFGLLLAAV 249 Halorubrum lacusprofundi
jgi:Caur_3861 629 TTNILrtlf-tmvMLSLTAYI 648 Chloroflexus aurantiacus J-10-fl
jgi:Fnod_1595 494 IKSILltlg-wifVMILIYSI 513 Fervidobacterium nodosum Rt17-B1
jgi:Fnod_0291 623 VKSILftlg-wvfVIILVYSI 642 Fervidobacterium nodosum Rt17-B1
Q3EV92        188 ALLTIiis--fmiIILPLVII 206 Bacillus thuringiensis serovar israelensis ATCC 35646
EAR10656      184 ALWNCiipllvvgLPFVLIIG 204 Reinekea blandensis MED297
Q2SI34        200 AMGNMtiv--liaGFIPVIAV 218 Hahella chejuensis KCTC 2396
Q7UH00        207 GLFNLila--gaiVLVPIMAL 225 Pirellula sp.
EAZ83522      200 FFTIFipgi-ilfILFFVLFF 219 Bacillus sp. B14905
Q5WAD2        210 SVLVVlil--gamLVVIAVVV 228 Bacillus clausii KSM-K16
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