Conserved Protein Domain Family
AmpD

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COG3023: AmpD 
N-acetyl-anhydromuramyl-L-alanine amidase AmpD [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 442259
Aligned: 612 rows
Threshold Bit Score: 75.6711
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_066403753    1 MRf------nSLPaVEDsvrrtgnngeytlrkisLPVPGEAlqleglfcapkNRsgyyydvvHPKDQIVLHFTAGQir-- 72  
WP_013960302    1 MLs-----------ISDdfad---------gakrITSLGAGnp-------------------mTPTRIVVHYTAGSsl-- 39  
WP_014950542    1 MNtlhasplpLFS-IDdhiltg-------dnitfRLSPNTS-----------GRfq-----sGSPDTIVIHFTAGSsl-- 54  
WP_014890978    1 MA---------FA-VKnhvlhhn-----dkpvaqKPTPNVGg-------------------vLKPSLLIMHYTAAQsa-- 44  
WP_062152328    1 -----------MK-IInhrlcrd----ddtpypfRASPNIGd-------------------aLNPSFLVMHYTAGRnf-- 43  
WP_018065570    1 -----------MR-IEnhrip---------giwhRQSSNLG------------Aar-----eKPPVVIVLHYTTGWng-- 40  
WP_106748753   12 MS---------FS-VLnhrlcld-----grpvgfRQSPHGGr-------------------aMTPRHLILHYTAGLta-- 55  
WP_114983296    1 MStq-----ksFD-VHnhwlsa------dhathdKVTGKDS-----------GAya-----sGLPDTIVIHYTGGPsl-- 50  
WP_106481213    1 --mvcskfnssFS-IVnhrlmg------dgvvhlACVKNTRk-------------------lEGPDMIVLHYTAGTsa-- 50  
WP_127074687    1 -----------MD-ILnhrlvd------ceavhlTCSKNTRp-------------------lAPPDTIVLHYTAGSngla 43  
WP_066403753   73 -----------sDLgALT-----GHQRHVSVPFIIARDGTIYQLFSSKFWSGHIGKGLgnEGt-----GNAQDKRTIGIE 131 
WP_013960302   40 ----------sgAVnALK-------SRGLSYNVLVDLDGSLHQARAFNRRAGHAGRSNf-KAtsglknQSSLNGSTIAIS 101 
WP_014950542   55 ----------ssSVnVLT-----NADSGVSAHFAVGRNGDIVQMLPTNKIAWHAGESYy-EG------RSGLNQYSIGIE 112 
WP_014890978   45 ----------kgAIsWLC-----NPNAKASAHLVVDLDGAVTQLAPFNRVAWHAGKSVw-RR------RSNCNAFSIGIE 102 
WP_062152328   44 ----------dqSVnWLV-----NPAAKASAHLVVGRDGSVIQLVAFNKVAWHAGSSSw-QG------YTGLNNYSIGIE 101 
WP_018065570   41 ----------kaSRdWLMgeaggTTNRGSSAHVVVDRDGTAWQIAPFNRTAWHAGPSRy-GE------LQGLNSHSVGIE 103 
WP_106748753   56 ----------rsAIgWFL-----DPRAKASAHLVLDRQGEVTQMMAFDRTCWHCGQSSw-QG------VSGLNSQSIGIE 113 
WP_114983296   51 ----------rsAVnTFK-----NPEVRASAHIVIDYDGSVVQLIPFNRRAWHAGQSQw-GE------RTSLNQYSIGIE 108 
WP_106481213   51 ----------esSSiFLT-----RPDVSASAHLVIGRKGEVFQLVPFHIEAWHAGKSWy-AG------RGGLNRYSIGIE 108 
WP_127074687   44 sahyltrpdvtaSAhYLT-----RPDVTASAHLVIDRKGDIIQLVPFNVEAWHAGKSFh-LG------RINLNRYSIGIE 111 
WP_066403753  132 LSNYGflteregkle-------------------tyysrqrnndGtiglpdiycslteigayqklqeafrnqryyATYTE 192 
WP_013960302  102 LVNLGfhehfsgg-----------------------hwwyarssGklrgpkvvdveank---mssiynpglvmhwVPYTD 155 
WP_014950542  113 LDNAGqlkargdgtfeswfge-------ifgenevlaaqhinqqSmg--------------------------ywHKYTD 159 
WP_014890978  103 LTNAGpltklangkfadaygkn------vpasqvamlvhkldrgGek--------------------------pwMIYPA 150 
WP_062152328  102 LDNVGivnpsptgdfrtwfgd-------pipieqviqaqhknetVsr--------------------------ywQLYTP 148 
WP_018065570  104 FVNAGwmkpnglgdyidaygrrmndralkkaggytlapharvgsGsf--------------------------awPLYPE 157 
WP_106748753  114 MVNAGrlakgaggrwrtwtge-------avpdgevvvarhrhegAda--------------------------gwHAYPA 160 
WP_114983296  109 IVNPGylmqhgniwygmfqdr--------yeadkviqavhaneqKpr--------------------------wwRVFEP 154 
WP_106481213  109 LDNLGklrfsgdlfvaecgr----------vvlpdevytdcsgdHpt--------------------------ywHRYTE 152 
WP_127074687  112 LDNLGklrregerfiaecgk----------dvqpsdvfvdeangQpt--------------------------ywHRYTD 155 
WP_066403753  193 AQYQSLIILLRYLTATY-NiprqfleepkrytttpdvlsfkgIVSHINY-RkdGKWDIGpaFE---W-KKVIQG------ 260 
WP_013960302  156 AQVASCEALIEALVAKYpSit--------------------eIVGHDDV-SinAKLDPGpaLPtqaWrEKFNMQgdlg-- 212 
WP_014950542  160 VQIVRTLSLCKALCSHY-Nis--------------------tIVGHEEI-ApsRKVDPGpaFP---L-QRLKAAvlqsds 213 
WP_014890978  151 LQISAAVDIAKAICQTY-Gis--------------------dIAGHDDI-AptRKRDPGpaFA---M-ESFVSRvlgrk- 203 
WP_062152328  149 EQLFTALEIAGTLIQHY-Glk--------------------dILGHDDI-ApgRKSDPGpaFP---M-MTFRSRllgrsd 202 
WP_018065570  158 AQLETGLEIVQALIAAYpi---------------------aaIVSHEEIdTrgWKTDPGpaFP---M-ARFQGLmgeaag 212 
WP_106748753  161 AQVAAAIAIGRALRAAY-Gfa--------------------sVLGHEDI-AprRKVDPGpaFP---L-AEVAAQilerg- 213 
WP_114983296  155 EQIAACKALCEALIETY-Nik--------------------eILGHDEI-SpgRKQDPGpaFP---L-ERIRTRlldtnr 208 
WP_106481213  153 RQIRVLQEICSLLEETYpi---------------------rdVVGHSVI-Tp-RKIDPGpaLE---F-AFSELQvkn--- 202 
WP_127074687  156 EQLKTVVLVCLLLMDRYpi---------------------ryLLRHSDI-Tp-RKIDPGpaFP---P-ELLELNr----- 203 
WP_066403753  261 -----------VQTT 264 
WP_013960302  213 -------leaaVNSP 220 
WP_014950542  214 etwatessdsnsqre 228 
WP_014890978      ---------------     
WP_062152328  203 svsdeggtyvttanl 217 
WP_018065570  213 reeayvvtagrLNLR 227 
WP_106748753      ---------------     
WP_114983296  209 sdetgptpterrqgt 223 
WP_106481213      ---------------     
WP_127074687      ---------------     
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