Conserved Protein Domain Family
f2_encap_cargo4

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NF041169: f2_encap_cargo4 
family 2 encapsulin nanocompartment cargo protein polyprenyl transferase
Statistics
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PSSM-Id: 469080
Aligned: 52 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_040740529  10 TPVDLAAIRTRVDDELdrf-lrdKAAASapALPGELTdTVRDFLFA------------GGKRIRPLLCVLGWHAAS---- 72  Nocardia teneri...
WP_014983661   9 APVDLAATRIRVDGVLdrflrgkASADP--TLPGEITdTLRAFLFA------------GGKRIRPLLCVLGWHAAH---- 70  Nocardia brasil...
WP_055509137  19 AGFLETWRAPVADPDV----------------QAAYR-LLGDFILG------------GGKRVRPQLCYWGWRGAG---- 65  Nonomuraea pusilla
WP_068894052  10 ISKAIDQVRRKVDARLirfldahLSPVDdpDVIEGYR-QLREFVVA------------GGKRIRPILCYWGWHGAG---- 72  Planomonospora
WP_059078071  14 VPFVLERCRELVRPAL-------REAVG--RTHPWVG-EMAAYSFGwcevggaptaasGGKGVRQALAVLGAEAVG---- 79  Streptomyces sc...
WP_010984428   4 TPESLHRSRDAITPAL-------RTALH--LLDEETR-HQAAYHLGwieadgtpadggGGKAVRPALALLSAQAAG---- 69  Streptomyces
WP_014983665  12 ATEILTNVRGLCEPLL-------REAVG--TLPEPLD-HMGGYHFGwwdadgnptpqpVGKALRPALTVCTAVACG---- 77  Nocardia brasil...
WP_067577957  17 PAEILALTRRIVEPPL-------RSAVE--SMPEPLR-RMASYHLGwcdaqgvpvranVGKLFRPALAICACIACG---- 82  Nocardia terpenica
WP_067588711  16 PSEILANSREIVDPGL-------RIAVD--LLPEPLR-QMAGYHLGwldvrgeparmsAGKLVRPALAICACTACG---- 81  Nocardia terpenica
WP_073766288  15 AAEVLARTRAQVDPVL-------RAAVG--TLPTRMR-HIAGYHLGwwdvhgtpchggSGKALRPALVLAAARATGadgr 84  Streptomyces sp...
WP_040740529  73 ------------------------GcppVPRPILRAAAALELFHAAVLIHDDIIDNSDTRRDHPTVHRAlahrhadrrdp 128 Nocardia teneri...
WP_014983661  71 ------------------------GttpVPQPVIQVAAALELFHAAVLIHDDIIDNSDTRRDHPTVHRAltarhperrdp 126 Nocardia brasil...
WP_055509137  66 ------------------------Gg--DCDEIISAAAALELCHAGLLIHDDIMDGSDLRRGRATVHRGlaalhd-gpda 118 Nonomuraea pusilla
WP_068894052  73 ------------------------Gg-dQDAPVIDAGAALELCHAGLLVHDDVMDGSDTRRGRPALHRSlagsar-ppga 126 Planomonospora
WP_059078071  80 ------------------------A---PARAGVPAAVAVELVHVFSLLHDDIMDGDLERRRRPTVWKA----------- 121 Streptomyces sc...
WP_010984428  70 ------------------------A---PAETGLPGAVAVELVHNFSLLHDDLMDGDEERRHRRTVWTL----------- 111 Streptomyces
WP_014983665  78 ------------------------S---TAHAALAAAAAVELVHNFTLLHDDVMDADEVRRGRPAVWKM----------- 119 Nocardia brasil...
WP_067577957  83 ------------------------G---KPESAAPAAVAAELVHNFTLIHDDVMDGDRTRRGRSTVWAL----------- 124 Nocardia terpenica
WP_067588711  82 ------------------------G---AADSAAPAAVAAELIHNFTLIHDDVMDGDTTRRGRPTVWSV----------- 123 Nocardia terpenica
WP_073766288  85 agrnrtgsngtgpngagpteaglsGt-ePHGAGLSAAAAVELVHNFTLLHDDVMDGDQLRRHRPTAWSA----------- 152 Streptomyces sp...
WP_040740529 129 drFGAHAAIVLGDLAMVWSAELLhtAQLTDAQLSEALEVLDGMR-ADVMYGQYLDL-LTTARp---sPD--LGRALQIIR 201 Nocardia teneri...
WP_014983661 127 erFGRHAAIVLGDLAMVWSAELLhtARLTARQLRTALEVLDGMR-ADVMYGQYLDL-LTTACp---sGD--LDRALDIIR 199 Nocardia brasil...
WP_055509137 119 daFGEAGAILLGTLSLAWSDALLa-SCGVEPARLRAAQHLFDAMrTEVISGQYLDI-LAHRR-----TGasVTAALTVIR 191 Nonomuraea pusilla
WP_068894052 127 qaFGGSAAILLGVLAQAWADELLt-GVEVGQARTHAARMLFSRMrLEVISGQYLDI-LAGMG-----EEanVEKALRVVH 199 Planomonospora
WP_059078071 122 --YGTGPAVLAGDALFALAVETL----ATAEPGASALRTLSAAL-GELVRGQADDL-LFAARpwagpERvrPAEYRAMAE 193 Streptomyces sc...
WP_010984428 112 --WGASGAILTGDALLALAQEVL--LDCGLPTGAAAARLLARTT-RDLIRGQVQDV-AFERR-----AHvpIEECVDMAA 180 Streptomyces
WP_014983665 120 --WGSADAILLGDALHALAARVLv-AGLPGATATAALAALEMAI-IEMCRGQHEDC-RLGAGe-----RagLDEYTRMVM 189 Nocardia brasil...
WP_067577957 125 --WGVSDAVLLGDGLHALAAEVLv-ARLADPVVGPALDRLESTV-IELCRGQHEDClAADSRr-------sLADCERTAM 193 Nocardia terpenica
WP_067588711 124 --WGVSDAVLLGDALHAVAAEVLa-SRLPATVVGPAVDRLESTV-IELCRGQHEDC-SIAQE-----REpaIGECERIAM 193 Nocardia terpenica
WP_073766288 153 --FGTPDAILAGDALQALALRLL--ARDAGREAQAAGARLAWCV-IELCEGQHADC-SFEER-----ADvgMAECLAMAE 221 Streptomyces sp...
WP_040740529 202 YKTVSYtCERPLLLGAVLGGAHPGVREALAAYARPIGEAFQLRDDLLGVFGDPAHTGKSALEDLRDGKHTALVALALANA 281 Nocardia teneri...
WP_014983661 200 YKTASYtCERPLVLGALLADPAPGIPAALAAYARPLGEAFQLRDDLLGVYGDPARTGKSNIEDLREGKHTALVALAFTHA 279 Nocardia brasil...
WP_055509137 192 YKTAKYtVERPLQIGGALAGAPGELIDSYSRFGLPLGEAFQLRDDVLGTFGVSAQTGKSALDDLREGKRTVLFAEAVRRA 271 Nonomuraea pusilla
WP_068894052 200 YKTAKYtVERPLQIGGVLAGADPPLLEAYSRFGLPLGEAFQLRDDILGVFGDTAVTGKPVIDDLREGKRTVLIAHAFARA 279 Planomonospora
WP_059078071 194 RKTGAL-LGCAAALGALLGGGPPAAVSALDRAGRRLGLAFQIVDDVLGIWGDPEVTGKPVHGDLRERKKTFPVLAALDAA 272 Streptomyces sc...
WP_010984428 181 GKTGAL-LSASAAIGAVLAGAPVTTVDALALYGQQVGLAFQLTDDVLGIWGDPAVTGKSVHSDLRARKKSLPVTYALNQG 259 Streptomyces
WP_014983665 190 GKTGAL-MGCACVLGALCAQADRTTVAAMETFGRELGMAFQFVDDLIGIWGDPAITGKPA-SDLARHSMSLPVVSALGSG 267 Nocardia brasil...
WP_067577957 194 SKTGAL-MGCACALGALCAGASAEMVSSMDRFGRELGMAFQLTDDLIGIWGDPAISGKPA-DDLAHRKYTMPVVAALLSG 271 Nocardia terpenica
WP_067588711 194 GKTGAL-MGCCCALGALCAGADEPAVAAMDRFGRELGMAFQLVDDLIGIWGDPNVSGKPAG-DLARRTYTVPVVAALRSG 271 Nocardia terpenica
WP_073766288 222 AKTGSL-LGCACALGALSAGADEEVVDAMDAFGRCLGIAFQLIDDLLGIWGDPRVTGKPAGSDLTALKKSLPVVAALASG 300 Streptomyces sp...
WP_040740529 282 DPHQSArLLELL--GNPDlderQAATCREILAAT-ARPRVEAMI--RARWAQADRVLEEAPFPTAVGRALRHIADVVVSR 356 Nocardia teneri...
WP_014983661 280 DAEQSErLSAML--GDPLl---DEQRAAECREILgATALARVEGmiRTRSEQAHQALEQAPIPLAVIRTLQHLADDAIAR 354 Nocardia brasil...
WP_055509137 272 SPGQLAyLRAWH--GNPElteeHAAEMRAVLRDTgALARVENMI--EERVAEAVDALGAAPVEADARAALTVLADQLAHR 347 Nonomuraea pusilla
WP_068894052 280 RGPQRDrLRTWY--GAPGlderSADALREIIVDTgALAHVESLI--AQRADQALGVLRDGVIPAPTCEALALLVDRLAHR 355 Planomonospora
WP_059078071 273 SPEARR-LAELL--ASda----dPREAAVLVEAAgGRAAALDEA--RRHIAAAQAALADLAPRSAAVDELRALSAFLLRR 343 Streptomyces sc...
WP_010984428 260 GTVSVE-LATWLsaPGEPde-aELRRAADLVAAAgGRDWATAEA--ARRMALGEAALRGVDLDAAARDELIALGHFVVDR 335 Streptomyces
WP_014983665 268 TAAAAE-LARMYr-PSPAtaamDTAKAAALVESAgGRRWTQQLA--ERRMRAAIAALA----DPAAAADLMALAHLVSHR 339 Nocardia brasil...
WP_067577957 272 TAAAAE-LGLLYrdPAPLss-gRVARAAELIDAAgGRRWAREQA--ERRTESAL----RCLPDGSAADDLAVLARLVARR 343 Nocardia terpenica
WP_067588711 272 TAAAVE-LKQLYsqPHSLsa-aQIARAAELIESAgGRSWTRQEA--ERRMKSALDCL----PAQLASADLRVLARLVAHR 343 Nocardia terpenica
WP_073766288 301 TEAGRE-LADVYasGTPLsd-vQLPHVADLVERAgGRAWAQGRA--DEFTRRARDGLAEAVPDPDAAGELLSLARLITRR 376 Streptomyces sp...
WP_040740529 357 NT 358 Nocardia tenerifensis
WP_014983661 355 TG 356 Nocardia brasiliensis
WP_055509137 348 TS 349 Nonomuraea pusilla
WP_068894052 356 VV 357 Planomonospora
WP_059078071 344 DV 345 Streptomyces scabiei
WP_010984428 336 EV 337 Streptomyces
WP_014983665 340 DR 341 Nocardia brasiliensis
WP_067577957 344 DL 345 Nocardia terpenica
WP_067588711 344 NL 345 Nocardia terpenica
WP_073766288 377 DR 378 Streptomyces sp. CB02923
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