1JI0


Conserved Protein Domain Family
LivF

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COG0410: LivF (this model, PSSM-Id:223487 is obsolete and has been replaced by 440179)
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ABC-type branched-chain amino acid transport system, ATPase component [Amino acid transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 223487
Aligned: 72 rows
Threshold Bit Score: 244.686
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JI0_A     4 DIVLEVQSLHVYYGA-IHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRXG 82  Thermotoga maritima
11498563   2 ESLLKAENISVKLNG-REILKKVTCWVERREIMLVLGPNGSGKSTLLKAMMGVVEH-EGRVFLDGEDVTALKPSERFRLG 79  Archaeoglobus fulgidus
18201997   1 --MLRTVKLNAGYKe-LHILFDVDADIKKNSITAVVGPNGSGKSTLLKSIFGLATVHSGQVFLNGGEITSLPPHTRTKLG 77  Archaeoglobus fulgidus
14601072   3 DWIIKLEDVSAGYGk-LQTLFDVSLEIPRGLITVIVGPNGAGKSTLLKTMFGFTTVYKGRVLFENTDVTHMPPHDRAKIG 81  Aeropyrum pernix
17988463   1 MTTFSVKALQVDRAS-IPVIRGVDVEVRSGEISVLLGSNGAGKTTFLESLSGIIPARAGTIRLDETELARLRPGARTKAG 79  Brucella melitensis
15669454   1 -------------------------------------------------MFGLTKIYSGEIIFKDKDIAKVPPHQKARMK 31  Methanocaldococcus ...
18313083   1 --MISAKALNAGYGk-LQVLYEVDFEARPGEITAVVGPNGSGKSTLLKAVAGIARIFSGSVYIGGLDVTKKPPHERARLG 77  Pyrobaculum aerophilum
18313952   2 AEVLRVEKLEAGYGk-FHVLFGIDLVVKSGEIVVLLGPNGAGKSTLLNSIAGMADVYSGRVVLLGRDITGRPPHEVMKMG 80  Pyrobaculum aerophilum
15899552   1 --MLETVKLNAGYGk-LQILFDVDFIASKKQIITIVGPNGSGKSTFLKTLVGLTNVISGKIIFEGDDITRFPPYKRSRKG 77  Sulfolobus solfatar...
17230404   9 TPLLEVENVHAGYIKdVDILQGVNFRVESGELVTVIGPNGAGKSTLAKTIFGLLTPHTGKITFKGKNIAGLKSNQIVRLG 88  Nostoc sp. PCC 7120
1JI0_A    83 IALVPEGRR------IFPELTVYENLXXGAYNRKDKEGIKRdLEWIFSLFPRLKERLKQLGGTLSGGEQQXLAIGRALXS 156 Thermotoga maritima
11498563  80 LTLAPERLR------VAKKLTVEENLAIAGDVER-----------AFELFPELRPLANKRAGKLSGGERQMVVLARAFIS 142 Archaeoglobus fulgidus
18201997  78 IAYLPQTDN------VFANLTVEENLKIAAYTVDKEEVKDR-IDAALDAFPELRAFMKRKAGTLSGGERQMLAMATALVR 150 Archaeoglobus fulgidus
14601072  82 MTFIFQLEN------IFRELTVYENLRLAGYDLPEDVFRDR-LEEVFSMFPRLKERLGQKAGTLSGGERQMLAMAIGIMR 154 Aeropyrum pernix
17988463  80 LSHVEQGRT------VFPDMTTDENIRVALHPDAD-------PGEAYGLFPELLQRRDVKAGMLSGGEQQMVVIARSIVN 146 Brucella melitensis
15669454  32 IAYLPQTNN------VFANLTVEENLKIAGYVLDKDKVKER-IEIALSVFPELKDILKRKAGTLSGGQRQFLAMGMALVR 104 Methanocaldococcus ...
18313083  78 LAYLQQTKN------VFQNLTVYENLRMAGYGLEDEKFKDK-LEEVLEIVP-IKPYLKRPAYELSGGWKQMVAVAMALIR 149 Pyrobaculum aerophilum
18313952  81 VAYVMQSPNnfgtanIFGELTVYENLIAASAGIPGKEVEGR-IEEVFNIFPKLKELRNRKAKFLSGGERQMLAIGLGLMK 159 Pyrobaculum aerophilum
15899552  78 LVYVAQIDN------VFRSLTVEENFKLSSYNLSENEYNER-MEIIFTLFSQIRDILKRKVYQLSGGQRQMVAISLALLR 150 Sulfolobus solfatar...
17230404  89 MCYVPQIAN------VFPSLSVEENLEMG-AFIRNDSLQPL-KDKIFAMFPRLSDRRRQRAGTLSGGERQMLAMGKALML 160 Nostoc sp. PCC 7120
1JI0_A   157 RPKLLXXDEPSLGLAPILVSEVFEVIQKIN-QEG-TTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEX-VR 233 Thermotoga maritima
11498563 143 NPKYLLLDEPFQGLFREVRGRVVELIHEASkKSG--VVVVTHDEINEVFPMSEKTCVLVGGKAIYFGEGDGAEKL---VK 217 Archaeoglobus fulgidus
18201997 151 KANVLMLDEPTAQLSPKFAEIIFDRILKLRdD-LkLTILLVEQNVQRALEISDNAYLLVSGRVAFNGTANELLEHEK-FE 228 Archaeoglobus fulgidus
14601072 155 KPKVFLIDEPTAGLSPKLAKEVLSYVRILNk--EgYTVVLVEQNVKASLEIGDKGVLVVNGRIAFDGPAEELLARKD-LA 231 Aeropyrum pernix
17988463 147 RPKVMLIDEMSSGLAPVIVNRLMRAVRQLAdN-G-MAIVLVEQFAALALSIGNRAYVLRRGQIVYDGNSEALAHDPArLH 224 Brucella melitensis
15669454 105 DAEVLMLDEPTAQLSPKLAEVIFEKIIEMRdN-FgLTILLVEQNAKRALEISDNGYMFVSGRVAFEGTAEELLNHEK-FK 182 Methanocaldococcus ...
18313083 150 DAKYFLFDEPTAQLSPKFAAEILTLIQKLKd--MgYTVVLAEQNAKKALEISDNAYLLVSGRINYFGPAKELLNNKE-LG 226 Pyrobaculum aerophilum
18313952 160 KPKLLMLDEPTSGLAPKLVSDFFSAIRDIRdK-LgISILLVEQNARKALEIGDRAYVLVTGRVKFSGN-AKLLDEGK-LA 236 Pyrobaculum aerophilum
15899552 151 KPKILLLDEPTAQLAPKIANEVFKKIVEIRdL-TeVGIILVEQNAKKALEIADNAYLFTSGRVLFKGKPVELLSNPD-LG 228 Sulfolobus solfatar...
17230404 161 EPSLLVLDEPSAALSPILVTQVFEQVKQINq--EgTAIILVEQNARKALEMADRGYVLESGRDAISGPGQELLTDPK-VA 237 Nostoc sp. PCC 7120
1JI0_A   234 KAYLG-V 239 Thermotoga maritima
11498563 218 EMFM--- 221 Archaeoglobus fulgidus
18201997 229 KLCMG-I 234 Archaeoglobus fulgidus
14601072 232 KMYLG-V 237 Aeropyrum pernix
17988463 225 QLYLGdA 231 Brucella melitensis
15669454 183 EYSLG-I 188 Methanocaldococcus jannaschii
18313083 227 RLYLG-L 232 Pyrobaculum aerophilum
18313952 237 ELFLG-R 242 Pyrobaculum aerophilum
15899552 229 KIFLG-L 234 Sulfolobus solfataricus
17230404 238 ELYLG-A 243 Nostoc sp. PCC 7120
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