Conserved Protein Domain Family
LivH

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COG0559: LivH (this model, PSSM-Id:223633 is obsolete and has been replaced by 440325)
Branched-chain amino acid ABC-type transport system, permease component [Amino acid transport and metabolism]
Statistics
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PSSM-Id: 223633
Aligned: 73 rows
Threshold Bit Score: 103.406
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15889684 315 LAFWDYAQNVWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMIGAYSTFMVQEVIRSHFpg-lfDWSLAIALP--- 390 Agrobacterium tumef...
11498566   1 ------MAGMISAVFTAIFLSFFASAVILNYKLGRMLNLTFASLFTLGAYL-YLAV-------------EELSVLAS--- 57  Archaeoglobus fulgidus
15888462 195 TGLAYFLQQLLNAVPVAALYAVLAFGYAIAFSVTKRADVTYGAIFAFAGQTCLLFADFGWNRLw---lVLPATLALGa-- 269 Agrobacterium tumef...
15888738   1 MDATIATFLIQDGVTNGAIYALLGLAIVLVFSVTRVIFIPQGEFVAHGALTLALLDAGRVPGTlnlllCMGVVALVLdlw 80  Agrobacterium tumef...
14601324   3 GLLEQWGNLVFQGVLMGLLYSLIALGYNIVYRVNKSINFAVPEVVLLAAYLAWIASIATG----------NLLAAVA--- 69  Aeropyrum pernix
15807925   4 FDPTIFPILTTDGLTNGAVYALLSLALVLVFAVTRVIFIPQGEFVMFGALTLASLQAGKVPGTlklvlALLALSVILnvv 83  Deinococcus radiodu...
17548926   1 MDLSIAAILAQDGVTSGAIYALLALALVLVFSVTRVIFIPQGEFVAYGALTLAAIQTNRAPLSaslllALGVLTFVAelg 80  Ralstonia solanacearum
15964920   1 --MAYFLQQIANAVPVAALYAALAFGYAIAFAVTRRADLTYGALFAFAGQIFVLFADVGWNRLw---lVLPAALGLGa-- 73  Sinorhizobium meliloti
13474313   1 --MLYFFQQVLNGLHSGALYALLAFGYVLINGILHRTNLAYGALFAFSGQAMILSVAFGYQVLw---lTLLVSVLFGv-- 73  Mesorhizobium loti
13474352   5 FDYQFFIEVLVGGLLSGVMYSLVAIGFVLIYKTSGVLNFAQGALLLFAALTFVSLVERG----------VPFALALV--- 71  Mesorhizobium loti
15889684 391 -------------VAFLVTGFVGLVMERGVIRFLYGRP---LETLLATWGISLMLQQGVRSI-----------------F 437 Agrobacterium tumef...
11498566  58 --------------LLAG-FLVGAILSKLTERLSVG------EATVVSLGFAIAIEELLRIL-----------------F 99  Archaeoglobus fulgidus
15888462 270 ------------gAGLFGGLWAAGLIGRAVMRPLAKASp--NAVTVASIGVLIALTESARLA-----------------A 318 Agrobacterium tumef...
15888738  81 amrrd-mrlprllQALAVNLALPGAI----YGLVAILApmqLPSFLRAMITIAIIAPMGYYVyriayrplsdasvlvllI 155 Agrobacterium tumef...
14601324  70 -------------IALAASIAVSMAMERFVAKPLLGRPp--IALIGATLGLFYMLKGVVLIV------------------ 116 Aeropyrum pernix
15807925  84 qslra-ghtqaalRSVLIGLGAWALL----WALTGWLAplkAPLAVQVLLTLLLVVPLGPLLyrvvyqplrnatvlvllI 158 Deinococcus radiodu...
17548926  81 rtllqpelrrhalRTGAIYAAKYLLFPLAVFAATSALApmtLPQPVQVALALLIVIPMGPMIyrlayeplaeastlvllI 160 Ralstonia solanacearum
15964920  74 ------------tAALAFGLGAGLIAGRYVMRPLAFSSa--NAVVVASLGSLLVLMETARLA-----------------S 122 Sinorhizobium meliloti
13474313  74 ------------vAAFLYAALISHVLSRSVFEPLADRSp--NAIVVTTLGILIVLSEASRIA-----------------A 122 Mesorhizobium loti
13474352  72 -------------ATFAIMVAIGIAIERTVLRPLTNKPp--ITLFMATLGLSYIIEGAAQLI-----------------W 119 Mesorhizobium loti
15889684 438 GPTn---rEVGSPGWMSGSF-----SVG----YLNFTWNRVWI---VCFSLSVFFALLVLLKRSAFGLQMRAVTQNRRMA 502 Agrobacterium tumef...
11498566 100 RSA-----YYQIVEASYLe------FYG-----ETLEIHEILN----AAVLSSLLVVFGLILNSRRGLELKFMEEDWELA 159 Archaeoglobus fulgidus
15888462 319 DTR-----QLWLPPLLSQPVr----FWIeggfAVTLTPIQMLN---TAVFCLLILTGSLYLGRSAFGRRWKAVSDDAFAA 386 Agrobacterium tumef...
15888738 156 ASVgvhlaLMGLGLAFFGPEglraaALSdggfTLGPMLVTAQSifiYLATILVMIGLYLFFEKTLLGKALKATAINRLGA 235 Agrobacterium tumef...
14601324 117 GKG-----EVAVLPFYPEVY-----RLG----FLTLGTNDVIA---LLGSIAVLAGIIVLHRKTSFGAAMRGVAEDAEGA 179 Aeropyrum pernix
15807925 159 ASValhlaLTGLGLAFFGAEgsntpAFVsgdlHIGSFSLSYQNllvMVVSLALMAGLAVFFERTLLGKALRATAVNRLGA 238 Deinococcus radiodu...
17548926 161 VSVgvhfaMVGLGLVMFGAEgsrteAFSdarfDVGALTVSGQSlwvVMVSALMIVALYFYFGRTVSGKALRATAVNRLGA 240 Ralstonia solanacearum
15964920 123 DTR-----SLWLPPFLNDVVv----FWPnpafPVALTVVQLVN---TALMMALVAGGHWLLTRSYAGRYWRAVSEDRKAA 190 Sinorhizobium meliloti
13474313 123 DTH-----DLWLPPMLAQPIv----FAEgagfKATLTLIQVLD---CAVVLAAVALATSAFARSSFGRRWRAVSDDPRAA 190 Mesorhizobium loti
13474352 120 GTQ-----VHGLDLGIEDVPl----EVG----GVLISQFDIFA---AVVAAGMVLLLSLFFRYTRIGLSFRAVADDQFAA 183 Mesorhizobium loti
15889684 503 SSMGIRTPWVDAFTFALGSGVAGLAGVALSQID-NVSPNLGQSYIIDSFMVVVFGGVGNLWGTLVGALSLG----VLNKf 577 Agrobacterium tumef...
11498566 160 EIYGVRTERIRLIAVSLSSALVCLNGALLSPTH-ILHPAMGWSVMV---VAVIVASLAAAAGNTFRKYAAT--------- 226 Archaeoglobus fulgidus
15888462 387 SLLGVNASRIFLLSYCAAGLVAAIAGVLATFYYgTMDFGAGLVFGLKVVLISAAGGYASPLICGLGAAAIGfaetFWVG- 465 Agrobacterium tumef...
15888738 236 RLVGVRTELTGVTAFVLAAAIAAISGVLIGPIT-TIFYDTGFLIGLKGFVAAILGGMASFPVTAVAAVGVGlieaFAS-- 312 Agrobacterium tumef...
14601324 180 AAYGLPVRRLMLAGWALAGLVSGLAALLLSIKT-QVSPDLEFFAII-ALAASLIAGLDSLGGIVVGGVFLGlaeqIASKt 257 Aeropyrum pernix
15807925 239 RLVGIRPEFAGSLAFTVAALMGVLSGLLIGPKF-PIGYDTGFLIGLKGFVGAIIGGLASFPLAAIGALLVGliesYAS-- 315 Deinococcus radiodu...
17548926 241 RLVGIGTTQAGRLAFTLAAALGALCGVLIAPLT-TVYYESGFLIGLKGFVGAIVGGLVSYPVAAAGALLVGllesYAS-- 317 Ralstonia solanacearum
15964920 191 ALCGIDPGAVYIAAYGVASLIAAFCGILAASYYgNMDFGTGLTFGVKVLFIAAIGGQTSPLFAALGAAGIGlmetVWSA- 269 Sinorhizobium meliloti
13474313 191 ALCGVDVRGVFRHAVLLGGFCAALAGVMASLYYgNVSFGSGLVYGLKILFVTAVGGYLSPPRAALGAAAFGmaesLWAG- 269 Mesorhizobium loti
13474352 184 LAVGLRLPLIWATVWAAAGLVALVAGLLWGARL--GVQFSLSLVVLKALPVLVLGGFDSILGAIVGGLLIGasekLAEVy 261 Mesorhizobium loti
15889684 578 lePTVGAVLGKILVLVLIILFIQKRPRGLFALKGRAI 614 Agrobacterium tumefaciens str. C58 (Cereon)
11498566 227 --------FPIALAYSILVGWLP-------------- 241 Archaeoglobus fulgidus
15888462 466 ---YGPVAWRDAAVLALLVGWLIVMRSRVEAA----- 494 Agrobacterium tumefaciens str. C58 (Cereon)
15888738 313 ---FFASDFKEIIVFGLIVPVLIWLSFGASHHEEE-- 344 Agrobacterium tumefaciens str. C58 (Cereon)
14601324 258 -lDPYLPGIGRDIAFFILFLVLLVKPYGLFGSERIER 293 Aeropyrum pernix
15807925 316 ---FSLSQWKEVIVFTLILPVLLWRSLSTRHHDEEEE 349 Deinococcus radiodurans
17548926 318 ---FWASAFKEVIVFTLILPVLLWRSLTTRHVEEEE- 350 Ralstonia solanacearum
15964920 270 ---YGPILWRDFAIFGFLVIVLVVTRREKIIP----- 298 Sinorhizobium meliloti
13474313 270 ---YFPIEWRDAWMYLFLVAMLILIGAGRDTGKVV-- 301 Mesorhizobium loti
13474352 262 igDYFGGGIESWFAYVVALAFLLIRPSGLFGQKLVER 298 Mesorhizobium loti
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