4CND


Conserved Protein Domain Family
TrmJ

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COG0565: TrmJ 
tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase [Translation, ribosomal structure and biogenesis]
tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 440331
Aligned: 550 rows
Threshold Bit Score: 154.889
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4CND_A        19 QNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPD-SQAIALAAG-ASDVIGNAHIVDTLDEALAGCSLVVGTS 96 
WP_041273094   8 ARVTVVLNRPRVSENIGSAARAMMNMGLDQLVVVAPDDFDR-TRAEKTATHsAASILDRMEICSTLSQALAPFEYVVGTT 86 
WP_012805651   3 ENIDVILFRPKYPENIGSVARACLNMGCGQIVLVEPWNWDQ-GKALPLATHhAGHLLENIRIHGTLAEALAPYSFAYGTT 81 
WP_041282183   3 DNLTVVLFQPKFAENVGSTARACANLGCPNLKLVQPPAWDL-ERAAPLATGrGKEVLHSLTLHPDLPSALSPHHTVYGTT 81 
WP_013257133  10 QNVFVVLVRPRVPENIGAAARAVANMGLGGLRLVDPADLTD-KPMRALATAqGQRVLESMTVSDSLAAALADCVAAAATT 88 
WP_013515893   3 DDLAVILFRPKYPENIGSAARACLNMGVSRLIIVAPYNLDM-DKARPLATAhARHILDSARVVETLAEAVEGFTSVYGTT 81 
YP_011949      3 PGLTVVMVKTRFPENVGMVARACVNMGAQDIVLVDPERWEI-DKARPLATAkGEPLLERVKVVGTLSEAVADCTAVWGTT 81 
WP_013908318   2 ENIAVVLVETLYPENIGSAARACANFGVKDLIVVKPKSLDR-EKMQAMATKsGLPVLENIKIFENLEEALAPFNYVVGTT 80 
WP_082116394  43 DNIRVVLVRPKYGGNIGAVCRAMMNGGLTDLALVAPDPQADwEDARRRAHS-AVDVLDRACRVDTLQDALGDCAAAAGTT 121
WP_068549300   1 mpIAVVMVEPRYPENIGSAARACGNFGIEELVVVAPRILDW-EKMLTMATRvGEKVLRNMKVYKNLEEALSDYNYVVGST 79 
4CND_A        97 ARSRTlPWPmLDPRECGLKSVae-aANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMA 175
WP_041273094  87 ARLGG-QRLvESPRTVALRVAtl-cENNRVALLFGPEDRGLTNGEICFCHALINIPTL-GFSSLNLAQAVVIVCYELLVA 163
WP_012805651  82 ARTGGwRQGiQTPEEAAPRIIeqsnAGAKVAIVFGPEDKGLTNEETDLCNQLLTIPTTDNLTSLNLSQAVMVVLYECFKK 161
WP_041282183  82 ARTGGwRKAiRTPEQVAEDVAgklaAGHQVAVVFGPEDRGLSNEEIDICGQLLTIPTASEATSLNLSQAVLLVLYEWFKA 161
WP_013257133  89 ARLGErRGAlIPPRQAAPEIMtw-aRRGPVAVVFGPEDRGLSHEQVDLCRLSINIPTS-QASSLNLAQSVIVLAYELRLA 166
WP_013515893  82 ARTGGwRKGiMSPTTLAGVVDerlrSGGRVAILFGPEDTGLTNDETSVCSGLMTIPTSREGTSLNLAQAVVVVLYECFKR 161
YP_011949     82 ARTGGwRREiLTPEKAGPEMAaslaDGERVALLLGPEDRGLNNDEIEHCTRLLTIPTAPEASSLNVAQASLIVLYECHKA 161
WP_013908318  81 ARLGRqRKVfETIREAAPDLVtl-sQNNKIAILFGNERWGLTNEDLYHCHRVVTIPTT-EAASLNVAQAVVIILYELFNQ 158
WP_082116394 122 ARPGLyRAHaTTPREFAPRALec-aRANRVALVFGPEDKGLNNRELALCTDLLRIPSSGLYPSLNLSHAVYVCAYEIFMA 200
WP_068549300  80 ARLGNrRRVfKALRDIAPEVSsy-sLNNRVALLFGNEKWGLTNEQLYYCHDVFTIPTE-NNTSLNVAQSIVVTLYEIYCA 157
4CND_A       176 WLATQengeqvehEETPYPLVDDLERFYGHLEQTLLATGFIReNHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQ 255
WP_041273094 164 VEHQQglplekkqVVPRLATVSELEIMYQRLSLVLAEIGYVNpENPDFWLNRVRQFLSRIKIQAGETGIVKGVIDRIVAY 243
WP_012805651 162 SLAKPfkv--agqPKDRYISSEEREVLFNQLRETLIEIDFLNkDNPEYFMLPLKRFFNRINPRLNEYNLLMGLCRQMRRI 239
WP_041282183 162 SSGKRflr--ttpPQSRLCTHEERETLLTSVQEALLRLDFFKdDNAAYWMLPVRRFFQRFELRRHEFNLLMGICRQVKWL 239
WP_013257133 167 AENGAgle---rrKLPTPAPLGEIQALLAHLQEAFVNIGHLDaNNPAHFMRLLKAPLERAAMTSKEVRAWRGVARQVNW- 242
WP_013515893 162 ALDAPftp--ngpPTERATTVQEQEALFENLRESLLAIDFLKgDNPDYWMLPVRRFFAKINLRRNEFNLLMGVCRQIQWF 239
YP_011949    162 SLAHPfrp--gpgPESRRITQDENELLLATLRDMLLDIDFLRhDNPDYFMMPVRRFMGKAGLRRHEFDMLMGVCRQVRRV 239
WP_013908318 159 EVEVPf-------KKPKLATSAELEPMYRLLKETLEAIDYVPhDNVTLWMTTIRRFLSRLELTSQEVRIIQGFCRNLLWH 231
WP_082116394 201 SGSFEpe-----gEPTGDAAIEQRERMYALWREVMAETGFAEpEKIDHMMMGLRRIFSRGRLSDNDVRILLGLARQTLWA 275
WP_068549300 158 SSNVQl-------PKPHLATVQEQELMYGVIKEVCERIDYVPhDNTVQWMTSIKRFLTKVDLTQKDVKIILGFCRKLLRA 230
4CND_A       256 N-K 257
WP_041273094 244 G-E 245
WP_012805651 240 V-G 241
WP_041282183 240 A-T 241
WP_013257133 243 LhG 245
WP_013515893 240 V-T 241
YP_011949    240 A-T 241
WP_013908318 232 L-R 233
WP_082116394 276 C-R 277
WP_068549300 231 F-E 232
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