Conserved Protein Domain Family
sda_mono

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TIGR00720: sda_mono 
L-serine dehydratase, iron-sulfur-dependent, single chain form
This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis]
Statistics
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PSSM-Id: 273233
Aligned: 11 rows
Threshold Bit Score: 726.446
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AP_002433      2 ISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTRVAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDID 81  Escherichia col...
EEE06410       3 VSVFDLFKIGIGPSSSHTVGPMIAACRFASHVEDANLLGFVRRVRVELYGSLGATGKGHGTDKAVLLGLEGHLPDTIDPD 82  Burkholderia mu...
EEG62320       2 ISIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDVQ-----TARIAIDIYGSLALTGRGHGTFDALMLGLEGSLPHDIPLA 76  Neisseria ciner...
WP_005693026   2 ISVFDMFKVGIGPSSSHTVGPMKAGKQFIDDLIKRNQFEQTTEIHVDVYGSLSMTGRGHSTDIAIIMGLAGYLPHNVDID 81  Haemophilus inf...
WP_000626426   2 ISVFDIYKIGVGPSSSHTVGPMKAGKEFIDELRSMGKLRDVTKITVDVYGSLSLTGKGHHTDIAIIMGLAGNTPEKVDID 81  Vibrio cholerae
WP_000470954   3 ISVFDLFKIGIGPSSSHTVGPMRAAYSFVEDLLKQNDLQATVRVQVKLYGSLSATGVGHATDKAVLLGLMGFDPEHIDTQ 82  Acinetobacter b...
WP_012234503   3 VTIFDLFKIGIGPSSSHTVGPMRAARMFAVDLDEAGLLARTAAVSVELFGSLGATGRGHGSDKAVILGLMGETPDGVDVE 82  Sorangium cellu...
WP_010957429   2 ISVFDLFSIGIGPSSSHTVGPMRAANEFARELVHR--MSDIDRLTITLYGSLAFTGKGHGTDKAVVIGLMGESPETVNPD 79  Coxiella burnetii
AAX77948      28 ESTFELFSIGVGPSSSHTIGPMRAGCDFINLYKDK--LPQTKSVKIDLFGSLALTGKGHKTDYAVVLGVMGFLPESVDIE 105 synthetic const...
WP_003400600   3 ISVFDLFTIGIGPSSSHTVGPMRAANQFVVALRRRGHLDDLEAMRVDLFGSLAATGAGHGTMSAILLGLEGCQPETITTE 82  Mycobacterium t...
WP_000135967   4 FSILSIFKIGVGPSSSHTIGPMEAGARFCESL--KGILEQVVRVQITLHGSLALTGKGHLSDEAVLIGLHGIYANELEVT 81  Helicobacter py...
AP_002433     82 SIPGFIRDVEERERLLLAqGRHEVDFPRDNGMRF-H-NGNLP----LHENGMQIHAYNGD-EVVYSKTYYSIGGGFIVDE 154 Escherichia col...
EEE06410      83 LIEPRLAAIRAEKSLSLL-GKQTIRFDEKEHIGF-Y-RKLMTgtsiVHPNGMRFQAFDEHgQLLVEKEYYSIGGGFVVNR 159 Burkholderia mu...
EEG62320      77 DIPDRLERILSRHILLL--NGNEIVFDHRRDLHI-RgDQVLP----KHPNGLRFTAYASDgSVLKEQVYYSVGGGFVVTE 149 Neisseria ciner...
WP_005693026  82 MISGFIEKVKQTALLPINvGQKIVKFDFENNLIF-H-RTFLK----LHENGMTITALDENrTELYRQTYYSIGGGFIVDE 155 Haemophilus inf...
WP_000626426  82 SIPSFIARVEETERLPVGmHCHTVSFPREGGMNF-H-RTNLP----LHENGMQIHAWIND-EKIFSKTYYSIGGGFIVDE 154 Vibrio cholerae
WP_000470954  83 VSTSLIEDVLENKAIQLN-QQKTISFDYKHDVLF-L-DESLP----YHPNAMELIAYNGAqEILYAETYYSVGGGFIVSE 155 Acinetobacter b...
WP_012234503  83 RAGAIVEGVRQSGRLSLL-SRHEIGFQVKGHLAF-L-HRSLP----FHPNGMRFTALDEGgAPLRARVYYSVGGGFVVNE 155 Sorangium cellu...
WP_010957429  80 SIENRIRNVETEGQVALL-NQYPLNFSLADDIIFnY-QEAFD----FHPNAVEFRAYDKNaALIQKSLYFSVGGGFIVND 153 Coxiella burnetii
AAX77948     106 LAKKLYDECLRNKKLNLG-QEFEIDFDYDKDLVF-HyNEFLP----EHANGMRFSLFNGE-ELLCEKEYFSIGGGFIVDK 178 synthetic const...
WP_003400600  83 HKERRLAEIAASGVTRIG-GVIPVPLT-ERDIDL-HpDIVLP----THPNGMTFTAAGPHgRVLATETYFSVGGGFIVTE 155 Mycobacterium t...
WP_000135967  82 TKKALLHEALENKVLKLA-NQHHIPFDYAKDLIF-D-NKPLT----RHQNALILKAFNSKnEVLKEETYYSVGGGFVYTE 154 Helicobacter py...
AP_002433    155 EHFGQDAANE---V--S---V--PYPFKSATELLAYCNETGYSLSGLAMQNELALHS--KKEIDEYFAHVWQTMQACIDR 222 Escherichia col...
EEE06410     160 DGDRVNGVRA---Aa-E---V--PYPFRTGDDLMRQCREHGLSIAELMMRNECALRP--EDEVRAGLLAIWRTMAACVER 228 Burkholderia mu...
EEG62320     150 EDFDRQAETE---K--T---V--PYPYNSCAELLAQCRLNQLDISEAVLANEAALAGcsEAEIRRRVAGVAEVMEGCIKR 219 Neisseria ciner...
WP_005693026 156 AHFGKEEKNT---V--Q---V--PYPYKNAEDILKHCSDNGLMLSTVMLENEIALNG--KEAVSAHLENVWKTMQACIEH 223 Haemophilus inf...
WP_000626426 155 EHFGKENESL---I--Q---V--PYAFRSAEELLNQCKESGLSISTLVMANEKAMHS--DEEVRTYFANIWRTMRECMER 222 Vibrio cholerae
WP_000470954 156 RQLTHTQTET---N--D---VkvPYPFHSAAELLSLCKTHHLSVSELMLENEKSWRS--ETEIRSKIMEIWKVMQQCIHN 225 Acinetobacter b...
WP_012234503 156 AAAKGENPIE---A--DttpL--PYPFHSAAELLAACAASGLSISRVMLENEKVFRP--EAETRAGLLRIWGVMQECVRR 226 Sorangium cellu...
WP_010957429 154 ERRNELVKTE---D--D---A--PYPFNSAAELMAHCQQQSLSIAAVMLANEKTRRD--EKTIFMGLMHIATVMENCINK 221 Coxiella burnetii
AAX77948     179 KQIKKDTVPTevsC--D---K--PYKFSTMAELRELCQRDGKTIDEIMFENEKTAYG--EQQSLDKLAEIWHVMETSIEK 249 synthetic const...
WP_003400600 156 QTSGNSGQHP---C--S---V--ALPYVSAQELLDICDRLDVSISEAALRNETCCRT--ENEVRAALLHLRDVMVECEQR 223 Mycobacterium t...
WP_000135967 155 KELDNLSEED---GneS---I--AYDFSSAKELLELCQKHQKSIAEIVRLRENAL----KNHPDATMVKIYHAMLECYDN 222 Helicobacter py...
AP_002433    223 GMN-TEGVLPGPLRVPRRASALRRMLVSSDKLS--NDPMNVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAY 299 Escherichia col...
EEE06410     229 GCK-VEGDLPGPMRVKRRAAELNARLRARSEESl-RDPLSMLDWVNLYAMAVNEENAAGGRVVTAPTNGAAGVIPAVLHY 306 Burkholderia mu...
EEG62320     220 GLA-ADGELPGGLNVRRRAPQLAAKLKVLRETEivNTQL----WPMVYAMAVNEENAAGGRVVTAPTNGAAGIIPAVLHY 294 Neisseria ciner...
WP_005693026 224 GIH-TEGILPGPLRVPRRAASLYRALQANTNLS--NDPMRVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIIPAVLAY 300 Haemophilus inf...
WP_000626426 223 GMN-TEGILPGPLRVPRRAAALRQQLLTSEKTT--NDPMAVVDWVNMYAFAVNEENAAGGRVVTAPTNGACGIIPAVLAY 299 Vibrio cholerae
WP_000470954 226 GLI-NEGILPGGLNVKRRAKKIHDKLLNKKNSNliVTTFHAMEWVNLFALAVNEENAAGGRVVTAPTNGAAGIIPAVLYY 304 Acinetobacter b...
WP_012234503 227 GFR-AEGVLPGGLKVVRRAPALYRKLIESPEAGl-RDPLTAMDWVSLYALAVSEENAAGGRVVTAPTNGAAGIIPAVLHY 304 Sorangium cellu...
WP_010957429 222 GCQ-TDGFLAGPLNVRRRAPSLYRKLLAIGPPG--AAHPQTMNWLNVYAMAVNEENAAGGRVVTAPTNGAAGIIPAVLNY 298 Coxiella burnetii
AAX77948     250 GLTcAEATLPGGLKVRKRAPSMIRKLKEQNIVN--TD----FNYLNAFAIAVNEQNACGERVVTAPTNGAAGVIPAVLKY 323 synthetic const...
WP_003400600 224 SIA-REGLLPGGLRVRRRAKVWYDRLNAEDPT---RKPEFAEDWVNLVALAVNEENASGGRVVTAPTNGAAGIVPAVLHY 299 Mycobacterium t...
WP_000135967 223 GANsKERYLPGSLKVTRLAPSIKTRLEKHPTSG--KDPLALIDYISLYARAIAEENASGGKVVTAPTNGACAVVPSVLLY 300 Helicobacter py...
AP_002433    300 YD-H----FIE---SVSPDIYTRYFMAAGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEI 371 Escherichia col...
EEE06410     307 YV-K----FVP---GSNEAGIVEFLLTAAAIGIIYKETASISGAEVGCQGEVGVACSMAAAALAAVMGGTPDQVENAAEI 378 Burkholderia mu...
EEG62320     295 FR-K----FNP---HATQERVENFLLTAGAIGILYKTNASISGADVGCQGEVGVACSMAAGAYAEVIGGTPKQVENAAEM 366 Neisseria ciner...
WP_005693026 301 YE-K----FIS---PLTPEIIERYLLAAGMIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAEILGGNPLQVCIAAEI 372 Haemophilus inf...
WP_000626426 300 YD-K----FIQ---TVTEKDYIRYFAASGAIGGLYKRNASISGAEVGCQGEVGVACSMAAAGLAELLGGSPEQVCMAAEI 371 Vibrio cholerae
WP_000470954 305 YV-T----FSK---DFSEDKVVRFFLSAAAVGILCKLNASISGAEVGCQGEVGSACAMASAGLAEILGASPEQVEHAAEI 376 Acinetobacter b...
WP_012234503 305 YR-R----FVP---TSTDEGVIRFLLTAGAIGILYKENASISGAEVGCQGEVGSACSMAAGALAEGLGGTPEQAENAAEI 376 Sorangium cellu...
WP_010957429 299 YK-Y----FCK---DASEKGVIDFLLTAGATGMLYKKNASISGAEMGCQGEVGVACSMAAAGLAAALGGTIFQVENAAEI 370 Coxiella burnetii
AAX77948     324 YL-QtheiVNQ---QELKEVVNKYLLVCAAIGILYKSGASISAAEVGCQGEVGVACSMAAAGYCALLGGDLDSIESAAEI 399 synthetic const...
WP_003400600 300 AI-H----YTSagaGDPDDVTVRFLLTAGAIGSLFKERASISGAEVGCQGEVGSAAAMAAAGLAEILGGTPRQVENAAEI 374 Mycobacterium t...
WP_000135967 301 AKnH----LFE---NLSQKAINDFLLTSAAIGYLYKKNASLSGAEAGCQAEIGVASSMAAGGLAHLCQATTQQVLIASEI 373 Helicobacter py...
AP_002433    372 GMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARMALRRTS-APRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK 450 Escherichia col...
EEE06410     379 GMEHNLGMTCDPVGGLVQIPCIERNAMGAIKALNASRMALKGNG-QHYVSLDSVIKTMRETGADMKTKYKETSRGGLAVN 457 Burkholderia mu...
EEG62320     367 AMEHHLGLTCDPVGGLVQIPCIERNGIAAEKALKLATLALLEDGtDKKVSLDEVIQTMLQTGRDMKATYKETSLAGLAAT 446 Neisseria ciner...
WP_005693026 373 AMEHNLGLTCDPVGGQVQVPCIERNAIASVKAINASRMALRRTT-NPRVTLDKVIETMYETGKDMNAKYRETSQGGLAVK 451 Haemophilus inf...
WP_000626426 372 AMEHNLGLTCDPVAGQVQVPCIERNGIAAVKAINSTRMALRRSS-APRVSLDKVIETMLETGKDMNAKYRETSQGGLAIK 450 Vibrio cholerae
WP_000470954 377 GLEHNLGLTCDPIGGLVQVPCIERNAIAAVKAINAAQMALHDDD-EHFVTLDKVIQTMKETGRDMSEKYKETSKGGLAVN 455 Acinetobacter b...
WP_012234503 377 AMEHNLGLTCDPVGGLVQVPCIERNAMAAIKAISAARMALHGDG-AHFVSLDKVIKTMRDTGADMESKYKETARGGLAVN 455 Sorangium cellu...
WP_010957429 371 GMEHNLGLTCDPVAGLVQIPCIERNAMGSVKAVNAARLALAEDG-EHKISLDMVIDTMREIGRNMNTIYKETSKGGLAVA 449 Coxiella burnetii
AAX77948     400 GMEHNLGLTCDPIGGLVQIPCIERNAMGAVQAINAAKLAYLDTGeKRFVGLDYVIKVMYETGLDMSSKYKETSLGGLATN 479 synthetic const...
WP_003400600 375 AMEHSLGLTCDPIAGLVQIPCIERNAISAGKAINAARMALRGDG-IHRVTLDQVIDTMRATGADMHTKYKETSAGGLAIN 453 Mycobacterium t...
WP_000135967 374 AMEHHLGLTCDPVGGLVQIPCIERNVLGAIKAISASKLALEDEY-KPKVSLDEVIATMYATGKDMNEKYKETSLGGLAKT 452 Helicobacter py...
AP_002433    451 V 451 Escherichia coli str. K-12 substr. W3110
EEE06410     458 V 458 Burkholderia multivorans CGD2
EEG62320     447 L 447 Neisseria cinerea ATCC 14685
WP_005693026 452 I 452 Haemophilus influenzae
WP_000626426 451 V 451 Vibrio cholerae
WP_000470954 456 A 456 Acinetobacter baumannii
WP_012234503 456 V 456 Sorangium cellulosum
WP_010957429 450 V 450 Coxiella burnetii
AAX77948     480 V 480 synthetic construct
WP_003400600 454 V 454 Mycobacterium tuberculosis complex
WP_000135967 453 L 453 Helicobacter pylori
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