Conserved Protein Domain Family
SWIM

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pfam04434: SWIM 
SWIM zinc finger
This domain is found in bacterial, archaeal and eukaryotic proteins. It is predicted to be organized into two N-terminal beta-strands and a C-terminal alpha helix, thus possibly adopting a fold similar to that of the C2H2 zinc finger (pfam00096). SWIM is thought to be a versatile domain that can interact with DNA or proteins in different contexts.
Statistics
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PSSM-Id: 309540
Aligned: 85 rows
Threshold Bit Score: 26.6119
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9C702  628 YQVSMAPKkktrlmgqsndstsgivQLNDTTCTCGEfqkNKFPCLHALAVCDELK 682  thale cress
Q9FXK5  529 YEVVGKLGgsn------------vvDLEKKQCTCKRydkLKIPCGHALVAANSIN 571  thale cress
Q9LPE7 1077 NVVDLE----------------------KKQCTCKRydkLKIPCSHALVAANSFK 1109 thale cress
Q9SHX1  452 HLVNLD----------------------KRTCTCCMfdiDKFPCAHGIASAKHIN 484  thale cress
O65227  681 HVVNVD----------------------EKQCTCRLfdqEKSPCIHAIAAAEHMG 713  thale cress
O81510  409 NVVNLS----------------------QNKCTCRMfdlEKLPCIHALASVEMAK 441  thale cress
Q9LRA1  636 FLVDLK----------------------MKSCSCKCfdiDKILCVHAMAAARHLA 668  thale cress
O80466  650 YTVSLL----------------------LKTCSCKVfdiQKYPCIHALAAFINIM 682  thale cress
Q9LDY3  587 YLVNLH----------------------FKTCSCKVfdiQKYPCIHALAAFIVFD 619  thale cress
Q9LRP4  673 YVVDLR----------------------NKSCYCRCfdlDKYPCVHSIAAVMTHL 705  thale cress
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