Conserved Protein Domain Family
LmbE

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COG2120: LmbE (this model, PSSM-Id:225031 is obsolete and has been replaced by 441723)
N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism]
Statistics
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PSSM-Id: 225031
Aligned: 39 rows
Threshold Bit Score: 82.0957
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15807731  51 LAGTPPFRAGQRVLLLAPHPDDETLCCGGTVQQA---RAAGAEVFIAWMTAGDGFEFDAALtehvlvprphnmrALGQTR 127 Deinococcus radiodu...
19552309   3 ALETLQWQDWSSVLIVVAHPDDPEYGLSAAVKEW---TDAGVEVSYLLLTHGEAGIQGLDPk------------ETGSLR 67  Corynebacterium glu...
19173356  45 RRLRGSLLLPGRYLLLIAHPDDESMFFAPSLLSL----G--GDIDILCLSNGNKEGKGKE-------------------R 99  Encephalitozoon cun...
15827787   1 ------MSETPRLLFVHAHPDDESLSNGATIAHY---TSRGAQVQVVTCTLGEEGEVIGDRwaelt---vdhadQLGGYR 68  Mycobacterium leprae
15839710   1 MNSCNRLPCAHEVLAVFAHPDDESFGLGAVLGDF---TAQGTRLRGLCFTHGEASTLGRTdr------------nLGEVR 65  Mycobacterium tuber...
15840613   1 ------MSETPRLLFVHAHPDDESLSNGATIAHY---TSRGAQVHVVTCTLGEEGEVIGDRwaqlt---adhadQLGGYR 68  Mycobacterium tuber...
15607464   1 MNSCNRLPCAHEVLAVFAHPDDESFGLGAVLGDF---TAQGTRLRGLCFTHGEASTLGRTdr------------nLGEVR 65  Mycobacterium tuber...
15608310   1 ------MSETPRLLFVHAHPDDESLSNGATIAHY---TSRGAQVHVVTCTLGEEGEVIGDRwaqlt---adhadQLGGYR 68  Mycobacterium tuber...
14916630  22 SSSGQEKLAVESILFVFAHPDDESMFFGPTIDYLg--NQHSTRVHVLCLSNGNADGLGSV-------------------R 80  fission yeast
1730610   45 QHIFPHKYGDYEINLVIAHPDDEVMFFSPIISQLnsyFPRTVPFNIICLSKGNAEGLGETR-----------------VR 107 baker's yeast
15807731 128 AGEAERAAAVLGVPAdhTFMLGYPdgglfrlfttnyatpftaprtqasrvyvtgalTPGHAFTGRNLETDLRRVLDRVQP 207 Deinococcus radiodu...
19552309  68 AAEQRAACDVVGVRN--LTILNHP--------------------------------DSMLVYNLVLRKDIAREIRIRKPN 113 Corynebacterium glu...
19173356 100 EKELRKVGCYTGAKVliTTFFSDG-----------------------------------EDWDPVMIYIKLLAIYILRPF 144 Encephalitozoon cun...
15827787  69 IFELTEALRALGVSA--PIYLGGAgrwrdsgm----------------rgtaprrrQRFIDADENEAVGALVAIIRELRP 130 Mycobacterium leprae
15839710  66 REELAAAAQVLGV-D--HVQLLAYp------------------------------dNGLAQIPLNELTQRVVDALAGAD- 111 Mycobacterium tuber...
15840613  69 IGELTAALRALGVSA--PIYLGGAgrwrdsgm----------------agtdqrsqRRFVDADPRQTVGALVAIIRELRP 130 Mycobacterium tuber...
15607464  66 REELAAAAQVLGV-D--HVQLLAYp------------------------------dNGLAQIPLNELTQRVVDALAGAD- 111 Mycobacterium tuber...
15608310  69 IGELTAALRALGVSA--PIYLGGAgrwrdsgm----------------agtdqrsqRRFVDADPRQTVGALVAIIRELRP 130 Mycobacterium tuber...
14916630  81 EKELVVAASKYQIDKtnVHVVSDPql----------------------------qdGMQAKWDPTDVAKHISQIIERYNI 132 fission yeast
1730610  108 ELNESAALLLHNERAvsVQVMDFQd-------------------------------GMDEIWDIDSITSSLSQKIDIKNH 156 baker's yeast
15807731 208 DVVLAPAPQD-----FHADHHTLSYIALRLMGERQQEDr-----------------------lRFWVVHGGVEWPLPkgl 259 Deinococcus radiodu...
19552309 114 AVVVSNFDVEaygglNQADHRVAGLAAIDATRDAANPWa-------------------------QPELLQEDLQPWGa-- 166 Corynebacterium glu...
19173356 145 DVLMTFDEAGv---sGHKNHISCSKGAGLFLKIHSVKG------------------------------------------ 179 Encephalitozoon cun...
15827787 131 H-VVVTYDPHgg--yGHPDHVHTHFITAAAVASSGVAAglevgadeypgkpwkvpkfywsvfaLSAFEAGMNALQGKdlr 207 Mycobacterium leprae
15839710 112 --LLLVFDDNgv--tGHPDHRRATEAALAAASTPGIPVlaw--------------------alpQPIADRLNAEFS---- 163 Mycobacterium tuber...
15840613 131 H-VVVTYDPNgg--yGHPDHVHTHTVTTAAVAAAGVGSgtadhpgdpwt----vpkfywtvlgLSALISGARALVPDdlr 203 Mycobacterium tuber...
15607464 112 --LLLVFDDNgv--tGHPDHRRATEAALAAASTPSIPVlaw--------------------alpQPIADRLNAEFS---- 163 Mycobacterium tuber...
15608310 131 H-VVVTYDPNgg--yGHPDHVHTHTVTTAAVAAAGVGSgtadhpgdpwt----vpkfywtvlgLSALISGARALVPDdlr 203 Mycobacterium tuber...
14916630 133 KTLITFDNKGi---sGHPNHIACYEGAMKIVKATPQVQ---------------------------VFVLESVNIFR---- 178 fission yeast
1730610  157 NLNQIIVTFDsygvsNHINHKSCYAAVKKLVDDYAQPKt------------------------kRNEQPPHVTALYLrsy 212 baker's yeast
15807731 260 hptlGLTLPPRAARLPWQKVALTPEQEq-----VKLSAVNTYQTQTRv-mGrfmRAFVRENELLSPAPLPEHPTPAEETT 333 Deinococcus radiodu...
19552309 167 ----EVIIIAGHPEPTHTMDLAKDSVD------AGVASLQAHKEYLAa------LPDPPKPEEFIPAFLEVEGGYAAAFR 230 Corynebacterium glu...
19173356 180 ----------LLLKSKNLFQKYGVDMS---------FSRISSTVPFS-------MYMEPVKMMCFHRSQMVWFRYLYVLF 233 Encephalitozoon cun...
15827787 208 pewtIPPREEFYFGYSDKDIDAVVEATsdv-waAKTAALTAHATQVVvgpTgraCALSNNMVMPIFAQEHYVLAAGSAGN 286 Mycobacterium leprae
15839710 164 -------ASFGGRGHG--HLDIMIEVDr----sRQLAAIGCHFTQSA-------DNP-VLWRRLELLGDREYLRWLRRSV 222 Mycobacterium tuber...
15840613 204 pewvLPRADEIAFGYSDDGIDAVVEADeqa-raAKVAALAAHATQVVvgpTgraAALSNNLALPILADEHYVLAGGSAGA 282 Mycobacterium tuber...
15607464 164 -------ASFGGRGHG--HLDIMIEVDr----sRQLAAIGCHFTQSA-------DNP-VLWRRLELLGDREYLRWLRRSV 222 Mycobacterium tuber...
15608310 204 pewvLPRADEIAFGYSDDGIDAVVEADeqa-raAKVAALAAHATQVVvgpTgraAALSNNLALPILADEHYVLAGGSAGA 282 Mycobacterium tuber...
14916630 179 ---------KYISYLDTIPTLVQSQAG-------RNDTIIIHADRKS-------TQRIRDAMVRGHKSQMVWFRYGWIYL 235 fission yeast
1730610  213 knniVLKYNSFIWEILKILYDLISPFRriiqalPPNTAAEKDKLSLMn--ThaqYVLAFATMLNAHESQVVWFRYGWWIF 290 baker's yeast
15807731 334 PPGEVGPEDSGFG 346 Deinococcus radiodurans
19552309 231 VFGR--------- 234 Corynebacterium glutamicum ATCC 13032
19173356 234 SNFMSYNDFTVIN 246 Encephalitozoon cuniculi
15827787 287 RDERGWETDLLAG 299 Mycobacterium leprae
15839710 223 P------------ 223 Mycobacterium tuberculosis CDC1551
15840613 283 RDERGWETDLLAG 295 Mycobacterium tuberculosis CDC1551
15607464 223 P------------ 223 Mycobacterium tuberculosis H37Rv
15608310 283 RDERGWETDLLAG 295 Mycobacterium tuberculosis H37Rv
14916630 236 SKYMSNNVLKRAT 248 fission yeast
1730610  291 SRFVFVNEFDVYT 303 baker's yeast
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