Conserved Protein Domain Family
RibF

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COG0196: RibF (this model, PSSM-Id:223274 is obsolete and has been replaced by 439966)
FAD synthase [Coenzyme transport and metabolism]
Statistics
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PSSM-Id: 223274
Aligned: 51 rows
Threshold Bit Score: 130.845
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17232340   8 GCSVWVA-SSTEMVL---TPTAVALGKFDGVHLGHQrviqpvlqstrsaqtwgdalDSSAQSAnpPAAPQERIYSTVVTF 83  Nostoc sp. PCC 7120
2829804    1 ---------------------------------------------------------------------MTIIAGTVVKG 11  Bacillus subtilis
19704042   1 MIVVNDI-LTTDIDF---NDTYVAIGNFDGVHYGHK--------------------KLIKETI--KAARENGKQAVVFTF 54  Fusobacterium nucle...
1351498    1 -------------------MKSLFIGYFDGLHQGHL---------------------FLKQNS--------KFEPMVLLI 32  Mycoplasma genitalium
2500206    1 ------------------MQQTLIIGAFDGLHKGHQ---------------------LLAQAA--------SGPVVALLI 33  Mycoplasma pneumoniae
19075895     --------------------------------------------------------------------------------     fission yeast
15639873   1 MRIFRWSqLQEGACIacdRGAAISVGGFDGPHRGHAfl----------------fdKVFAAAC--APVADRARCTGLITF 62  Treponema pallidum
13357915   1 -MIIEITsTNIYKIKqqfVINELIIGFFDGIHLGHMn--------------------LLSDPN----------NQTILTF 49  Ureaplasma urealyticum
6320442    1 ----------------------------------------------------------------------------MFTW 4   baker's yeast
16799810   1 MEVSHVT-LEPNKDS---RPAVLTIGKFDGVHLGHQ--------------------TILNTALs---IKKENEILTAISF 53  Listeria innocua
17232340  84 RPHPQEFFTG-Q-ARTWLTPLDEKVQQLRSLGVDQLVLLPFDKELTALSPEEFVEkILVQQLRCQRISVGQDFCFGKQRR 161 Nostoc sp. PCC 7120
2829804   12 KQLGRKLGFPtA-----NVDAKIHGLRNGVYGVLATVNHQFHLGVMNIGVKPTVG-----SNLEK-TLEIFLFDFHRDIY 80  Bacillus subtilis
19704042  55 ANHPMEILFPeK-KFDYINTNEEKLYLLESLGVDVVIMQKVDKDFLEYTPLEFVR-ILKNKLKVKEIFIGFNFSFGKGGV 132 Fusobacterium nucle...
1351498   33 DNPPLKQTNW-------LYDLQQRVAQIKTYL--KATVEVFDVAKHNMNALSFFE-QQIKRLNCDEIIVGTDWHFGNDHK 102 Mycoplasma genitalium
2500206   34 ANIPSLQSDW-------LYEPKQRQVQLQQHF--QSVVHSYDVIEHNISAQAFFD-QIISPLRCQQLVVGADFCFGKDNQ 103 Mycoplasma pneumoniae
19075895     --------------------------------------------------------------------------------     fission yeast
15639873  63 THPPRKHKTSsY--EGDLSTLRLRLRYFRARGFDFVVLIDFSKDFARIPGGVFFN-TLLRAVRVCYLAVGVDFRCGHGLD 139 Treponema pallidum
13357915  50 KNIPRKIKKLyD--------FNERIQQLEDLG--FKRIFIYDIDQNNLSGEEFID-QILKPLTPKKIIVGANFTYGNNFC 118 Ureaplasma urealyticum
6320442    5 TIYVSLLLVLaG---TFLMNRNTNTDIIDTFK------REVDLPIPAQPGPPFPL----VTDYCD-IVCG--FG-----R 63  baker's yeast
16799810  54 SPHPLWALKQiEiYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETTPEEFVT-DHLSNLQLSHIIVGSEFNFGKGRD 132 Listeria innocua
17232340 162 GTAKDLQLIAAKyHIPVSIVPLQTSDGqfledgncgsfesledAPISTSLIRQALETGDIKTANRFLGRPYILIGVVVEG 241 Nostoc sp. PCC 7120
2829804   81 G--EK--IECS-------ILFKIREER-----------------RFDSLESLTKQIKKDISCVAKRFELIGIMAPNKKES 132 Bacillus subtilis
19704042 133 GKAEDLEYLAEVhNIKVTELPPVTLNG----------------ELVSSSVIRKKIANSDFEGAIKFLDHPMLVIGEVIHG 196 Fusobacterium nucle...
1351498  103 DGIWLKKLFKN-----TVIVNKTN---------------------LSSSVIRNYLTNNELEKANQLLVEPYYRVGTVVHG 156 Mycoplasma genitalium
2500206  104 NADFLRRLFPN-----TTIIPKDSQT-------------------LSSSTIRQWLKQGQIEQANAVLLEPYFREGVVIRG 159 Mycoplasma pneumoniae
19075895   1 -----------------------------------------------MTVNLEEKRPEIVGPEKVQSPYPIRFEGKVVHG 33  fission yeast
15639873 140 TGVRELRRLGDAhSFVCDAVGHYTLEG----------------VRVSSSAVRRAVRCADFESARRLLGRAFSLDGEVIPW 203 Treponema pallidum
13357915 119 NASSLKQYFN-------VEIKIITN-------------------DVSTTKIKELIINKQVEIANKLLIKPYYRVGNVVRG 172 Ureaplasma urealyticum
6320442   64 GS----AELG---------IPTAN---------------------VPINQLPKGINDLDLG---VYFGFAHI---KTVDG 103 baker's yeast
16799810 133 SDVDLLRDLCKPyGIGVTSVPVIETNQ----------------TKISSTNIRAFIRRGHFLEAEQLLGHPWYITGMVENG 196 Listeria innocua
17232340 242 EQLG-RTIGFPTANLELPKDKFVp---RQGVYAVRVKILGESadanipleILGVMNIGNRPTVNGT-YSSVEVYLLD-WS 315 Nostoc sp. PCC 7120
2829804  133 LLSH-QELNLPDLCFYKKCNNLYg--vNRGVYNVIDNWFF----------EYGITQVAYRRIYILS---FLSFLKED--N 194 Bacillus subtilis
19704042 197 KKIA-RELGFPTTNIKMDNRLYP----PFGIYGAFLQVGNKNsq-----vLYGVVNVGYNPTLKQ--EISLEVHILD-FN 263 Fusobacterium nucle...
1351498  157 LKKA-RLLGFPTANIVMDNHLLTl---NKGSYIVRVLLN-----------NQTFYGIGFISQKDQ--DLVCETHIFN-FN 218 Mycoplasma genitalium
2500206  160 NQQA-RFLGWPTANITLKPYMVPl---RCGSYVITVTYH-----------QTNYPGVGFISYKND--QLVCETHLIG-FS 221 Mycoplasma pneumoniae
19075895  34 FGRGsKELGIPTANISEDAIQELlryrDSGVYFGYAMVQKRv--------FPMVMSVGWNPYYKNK-LRSAEVHLIE-RQ 103 fission yeast
15639873 204 QQSGgCARTLCAERGRVSQTLPP-----EGEYAVRLVQG---------------SGVGLRAQLSVG--SSLVQLRLG-TE 260 Treponema pallidum
13357915 173 DQIA-RNIGFNTANILCDNNLIDi---AEGVYKAQVIFNNKK--------YDSVVYLGIPKTINTRsFSMIEAHILD-FN 239 Ureaplasma urealyticum
6320442  104 QELS--VETRRDGR----TVVYN-----YGQYLSEANDDLSv--------LPMVLSVGKNPFYGND-FKTMELHIIHdFK 163 baker's yeast
16799810 197 EMVGlDDYVLPATGTYQTDKNLVk---VTNSRTIKVDLP------------DGLQQLHMKNELS---------------- 245 Listeria innocua
17232340 316 GDLYGK-ELAVQLVDFLRPEQKFPSLEALKAQIQQDCTVARQILS 359 Nostoc sp. PCC 7120
2829804  195 PKVSSK---YIRFGAGGLADKLNRFISSYVEESEENILG------ 230 Bacillus subtilis
19704042 264 KEVYGE-KVYVQIVKFMRKEKKFSSIDELKATIQADVDRWKLFKR 307 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
1351498  219 NEIYGS-LVKFTLLKFIRTISKFSSQAALQKAIQSDANFALKWLE 262 Mycoplasma genitalium
2500206  222 GDLYGK-QLRFTFNQFIRPQQKFSGVQALQKAISGDLKQAQKWFA 265 Mycoplasma pneumoniae
19075895 104 GEDFYEeIMRVIVLGYIRPELNYAGLDKLIEDIHTDIRVALNSMD 148 fission yeast
15639873 261 ALSHGR---------EALDSIEFE--------------------- 275 Treponema pallidum
13357915 240 QNIYDE-RIKIVFLKYLAPNLKFNNIDELITAIKNYIKLVLDKTN 283 Ureaplasma urealyticum
6320442  164 NDFYGA-RVKFNILGHIRPELNYTTKEALIEDINIDIRTAQTVLA 207 baker's yeast
16799810     ---------------------------------------------     Listeria innocua
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