Conserved Protein Domain Family
Amelogenin

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smart00818: Amelogenin 
Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth.
They seem to regulate formation of crystallites during the secretory stage of tooth enamel development and are thought to play a major role in the structural organisation and mineralisation of developing enamel. The extracellular matrix of the developing enamel comprises two major classes of protein: the hydrophobic amelogenins and the acidic enamelins. Circular dichroism studies of porcine amelogenin have shown that the protein consists of 3 discrete folding units: the N-terminal region appears to contain beta-strand structures, while the C-terminal region displays characteristics of a random coil conformation. Subsequent studies on the bovine protein have indicated the amelogenin structure to contain a repetitive beta-turn segment and a "beta-spiral" between Gln112 and Leu138, which sequester a (Pro, Leu, Gln) rich region. The beta-spiral offers a probable site for interactions with Ca2+ ions. Muatations in the human amelogenin gene (AMGX) cause X-linked hypoplastic amelogenesis imperfecta, a disease characterised by defective enamel. A 9bp deletion in exon 2 of AMGX results in the loss of codons for Ile5, Leu6, Phe7 and Ala8, and replacement by a new threonine codon, disrupting the 16-residue (Met1-Ala16) amelogenin signal peptide.
Statistics
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PSSM-Id: 197891
Aligned: 12 rows
Threshold Bit Score: 103.331
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q28462        12 YINFSYE--------------VLTPLKWYQSMMRHEYPSYGYEPMGGWLHHQIIP-VlSQQHSPSH-S-LPPQHHIPIMA 74  gray short-tail...
NP_033796     28 YINLSYE--------------VLTPLKWYQSMIRQPYPSYGYEPMGGWLHHQIIP-VlSQQHPPSH-T-LQPHHHLPVVP 90  house mouse
NP_001166340  28 YINFSYEkshsnainidrtalVLTPLKWYQSMIRQPYPSYGYESMGGWVHHQVIP-VlSQQHPPSH-TtLPPHHHIPVGP 105 domestic guinea...
NP_001014984  28 YINFSYE--------------VLTPLKWYQSMIRHPYPSYGYEPMGGWLHHQIIPvV-SQQTPQNH-A-LQPHHHIPMVP 90  cattle
AAW22047      28 YVNLSYE--------------ILTPLKWYQSMMKHQYPSFGYEPMSGWLQNPMIP-L-SPMMPQQQ---LPHPHAIPKLP 88  northern leopar...
Q99218        28 YINFSYEnshsqainvdrialVLTPLKWYQSMIRPPYSSYGYEPMGGWLHHQIIPvV-SQQHPLTH-T-LQSHHHIPVVP 104 human
XP_002915110  28 YINFSYEnthfqainidrtasVLTPLKWYQNMIRHPYPSYGYEPMGGWLHHQIIP-VlSQQNPPNH-A-LQPHHHIPMVP 104 giant panda
NP_001079152  28 YVNFSYE--------------ILSPLKWYQSMMTHQYPNYGYEPVSGWLQNP------IIPAPPMM-P-QQQQNAVPKLP 85  African clawed ...
AAC78133      28 YVNFSYE--------------VLTPLKWYQSLMRQPYSSYGYEPMGGWLHQPMLP-I-AQQHPPIQ-T-LTPHHQIPFLS 89  Cuvier's dwarf ...
XP_001515115  28 YINFSYE--------------VLTPLQWYQNMKRQQYPSYGYEPMGGWLHHQIIP-VlSQQQTPTH-A-LQPHHHIPVMA 90  platypus
AAR26720         --------------------------------------------------------------------------------     sheep
AAD22553       1 ---------------------VMTPLKWFQSIIGHQYPRYGYEPMGGWMHHNAGP-M-M--HPPHFhG-VHAIH--PALH 52  Elaphe quadrivi...
Q28462        75 AQQP-A-PPQQPVMPVPGQHPMAPTQHHQPNLpqpgqqpyqpqpaqqpqphqpiqpiqpI---QPIQPMQPMQPM----- 144 gray short-tail...
NP_033796     91 AQQP-V-APQQPMMPVPGHHSMTPTQHHQPNI---------------------------PpsaQQPFQQPFQPQA----- 136 house mouse
NP_001166340 106 AQQP-V-VPQQPLMPVPGHHSMTPNQHHQPNL---------------------------P---PTSQQPFQQPFP----- 148 domestic guinea...
NP_001014984  91 AQQP-V-VPQQPMMPVPGQHSMTPTQHHQPNL---------------------------P---LPAQQPFQPQSIqpqph 138 cattle
AAW22047      89 PHHS-VlIPQQPMIPLSPHHPLLP----------------------------------------PQANPSNPTYL----- 122 northern leopar...
Q99218       105 AQQP-R-VRQQALMPVPGQQSMTPTQHHQPNL---------------------------P---LPAQQPFQPQPV----- 147 human
XP_002915110 105 AQQP-V-VPQQPMMPLPGQHSMTPTQHHQPNLplp----------------------aqQ---PFQPQPVQPQPH----- 152 giant panda
NP_001079152  86 PHHPlL-IPQHPLVPVPVHHPVFP-------L---------------------------I---PQHTHQLKPTYL----- 122 African clawed ...
AAC78133      90 --------PQHPLMQMPGPHQMMPIPQQQPSL---------------------------Q---MPVQEPVQPQAG----- 126 Cuvier's dwarf ...
XP_001515115  91 AQQP-M-QPQQPMMPMPGQPSVTPTQHHQSNL---------------------------P---QPAQQPFQPQVP----- 133 platypus
AAR26720       1 -------------------------------------------------------------------QPFQAQPI----- 8   sheep
AAD22553      53 QKQP-QqLPQNPQLQQPGLNAFVPLNGHNALI---------------------------P----HYQHPFQPQAG----- 95  Elaphe quadrivi...
Q28462       145 ---------------QPM------------------QPM----------QPMQPQTPVHAVRPLPPQP---PLPPMFPMQ 178 gray short-tail...
NP_033796    137 ---------------IPP------------------QSH----------QPMQPQSPLHPMQPLAPQP---PLPPLFSMQ 170 house mouse
NP_001166340 149 ---------------TQPvqpqhhqpiqpiqpiqpiQPI----------QPIQPQSPLHPIQPLPPQQ---ALPPMFSMQ 200 domestic guinea...
NP_001014984 139 qplqphqplqpmqpmQPL------------------QPL----------QPLQPQPPVHPIQPLPPQP---PLPPIFPMQ 187 cattle
AAW22047     123 ---------------TNP------------------ESQ----------YPTNTQPIELPKPDILNK----PGQPLFPIQ 155 northern leopar...
Q99218       148 ---------------QPQ------------------PHQ----------PMQPQPPVQPMQPLLPQPP---LPPMFPLRP 181 human
XP_002915110 153 ---------------QPI------------------QPI----------QPIQPQPPMHPIQPLPPQP---PLPPMFPIQ 186 giant panda
NP_001079152 123 ---------------SNP------------------DGQ----------YPTNTQPDNQ------------NGKPIFPLQ 147 African clawed ...
AAC78133     127 ---------------EHP------------------SPPvqpqqpghpnPPMQPQLPGSPHPPMRPQQpgiPNPPMYPMQ 173 Cuvier's dwarf ...
XP_001515115 134 ---------------QQP------------------PHQ----------P--IQPQAPAHPMPPMPQP---PLPPMFPMQ 165 platypus
AAR26720       9 ----------------QS------------------Qp----------hQPLKPQSPVDPIQPL---P---PLPPIFPMQ 38  sheep
AAD22553      96 ---------------E---------------------------------HPIQSLSPVNPMNPQQPGN---ANQPIY--- 121 Elaphe quadrivi...
Q28462       179 PMSPMLPDM--EAWPATDKTKREEVD 202 gray short-tailed opossum
NP_033796    171 PLSPILPELplEAWPATDKTKREEVD 196 house mouse
NP_001166340 201 PIAPLLPDLplEAWPATDKTKREEVD 226 domestic guinea pig
NP_001014984 188 PLPPMLPDLplEAWPATDKTKREEVD 213 cattle
AAW22047     156 PQPPLVEERpqEPWQPASKTKLEELD 181 northern leopard frog
Q99218       182 LPPILPD-LhlEAWPATDKTKQEEVD 206 human
XP_002915110 187 PLPPMLPDLplEAWPSTDKTKREEVD 212 giant panda
NP_001079152 148 PMPPLVEDRpqEPWQAAGNTKQEELD 173 African clawed frog
AAC78133     174 PLPPLLPDMplEPWRPMDKTKQEEID 199 Cuvier's dwarf caiman
XP_001515115 166 PLPPLLPDLplEQWPATDKTKREEVv 191 platypus
AAR26720      39 PLPPVVPDLplEAW------------ 52  sheep
AAD22553     122 PLPPVIPDTplESWPA-DKTKKEEVD 146 Elaphe quadrivirgata
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