1F5M


Conserved Protein Domain Family
GAF

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COG1956: GAF (this model, PSSM-Id:224867 is obsolete and has been replaced by 441559)
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GAF domain-containing protein, putative methionine-R-sulfoxide reductase [Defense mechanisms, Signal transduction mechanisms]
linked to 3D-structure
Statistics
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PSSM-Id: 224867
Aligned: 26 rows
Threshold Bit Score: 165.926
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1F5M_B     8 HHADHVNYSSNl----------------------------------nKEEILEQLLLSYEGLSDGQVNWVCNLSNASSLI 53  baker's yeast
16126518  44 ARRHAFRNSAPpsdisrrpryira----------maeafnditlsadKATRYAEVADEIASVLDGEPNLTARMATVASML 113 Caulobacter crescen...
15793562   7 DVMHALHFSASd-----------------------------------KAALYREVLPQIESVVADETDWVANLANTAAVL 51  Neisseria meningiti...
15677721   1 --MHALHFSASd-----------------------------------KAALYREVLPQIESVVADEADWVANLANTAAVL 43  Neisseria meningiti...
15602998   1 ------------------------------------------------MMNYALLLKQLEQILEPETYIISRMANTSAFL 32  Pasteurella multocida
15643285 109 GLSDWVVVDGEkekivvmdvfslwrkgllrelslatlhaviefrkgkEIGNYGGKKEYFDSLLKEIEKILKRGKEALGDL 188 Thermotoga maritima
13541651   1 --------------------------------------------------------------MDLNDFSIKVLQEVCRIL 18  Thermoplasma volcanium
16081903   1 --------------------------------------------------------------MDLKEFARSQMQAACQYL 18  Thermoplasma acidop...
15837832   2 PMLAPFILTGN------------------------------------KPEQYAQLEAQAKALIHGETDRIANAANLAALI 45  Xylella fastidiosa ...
13472055   1 MFAAKAIDTSD------------------------------------KAAFYSDLAAQLKALLDGESDSIANAANTAALI 44  Mesorhizobium loti
1F5M_B    54 WHAYKSlavdINWAGFYVTQaseENTLILGPFQGK-VACQMIQFGKGVCGTAASTKETQIVPDVNKYPGHIACDGETKSE 132 baker's yeast
16126518 114 ANSFDS----YFWAGFYVVDptkERELVVGPYQGT-LGCLRIAFGRGVCGAAAATGQTQLVPDVHAFPGHIACDGRSQSE 188 Caulobacter crescen...
15793562  52 KEAFG-----WFWVGFYLVDt-rSDELVLAPFQGP-LACTRIPFGRGVCGQAWAKGGTVVVGDVDAHPDHIACSSLSRSE 124 Neisseria meningiti...
15677721  44 KEAFG-----WFWVGFYLVDt-rSDELVLAPFQGP-LACTRIPFGRGVCGQAWAKGETVVVKDVNAHPDHIACSSLSRSE 116 Neisseria meningiti...
15602998  33 YQHMPD----LNWVGFYLVK---DGVLKVGPFQGK-VACSDIGFGKGVCGYTWQTGTTTVVDDVHQFAGHIACDSASQSE 104 Pasteurella multocida
15643285 189 CEFLRNhvsyYDWVGFYFVE---DGKLKLGPFVGEpTEHVEIPFGVGICGQAAEREETFVVQDVSKETNYLSCSPKTKAE 265 Thermotoga maritima
13541651  19 KESNKK----YDWVGVYVME---NRKLKLEAFVGEkTEHEVINLGDGLCSLAVLKNEVVNEYDVKSNPKYLACFPSTQSE 91  Thermoplasma volcanium
16081903  19 KEKNPK----YDWVGFYVLE---HGKLKLEAFVGEkTDHVEINLGDGLCSLAVLKNDIVNEYDVKSNPKYLACFPSTQSE 91  Thermoplasma acidop...
15837832  46 FHSLPG----LNWVGFYFYDg---RELVVGPFQGL-PACIRIPLDKGVCGTAARTRRTQRIDDVDTFPDHIACDSASRSE 117 Xylella fastidiosa ...
13472055  45 FQMVPD----LNWAGFYFLAs--dEELVLGPFQGK-PACVRIAVGKGVCGTAVQLGTSMLIKDVHDFPGHIACDADSRSE 117 Mesorhizobium loti
1F5M_B   133 IVVPIISnDGKTLGVIDIDCLDYEGFDHVDKEFLEKLAKLINKSCVFK 180 baker's yeast
16126518 189 IVVPVFDpDGRLIAVFDVDSDKPAAFDEIDQAWL---EKILKATFG-- 231 Caulobacter crescentus CB15
15793562 125 IVVPLFS-DGRCIGVLDADSEYLAQFDETDALYLGELAKILEKRFEAS 171 Neisseria meningitidis Z2491
15677721 117 IVVPLFS-DGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRFEAS 163 Neisseria meningitidis MC58
15602998 105 VVVPIFQ-GGEMIAELDVDSPRLARFSAEDVAFLENCAALICIKE--- 148 Pasteurella multocida
15643285 266 IVVPIFK-DGKIIGELDIDSYSPSPFSEEDRAFLEKVCELVSKVV--- 309 Thermotoga maritima
13541651  92 IVVPVRY-GGKPIGEIDIDSDTKGAFDKADEEFLSKVADLIAPLVSSL 138 Thermoplasma volcanium
16081903  92 IVVPVRY-QGEPIGEIDIDSDKKAAFSKEDEAMLSSIADLMAPLVHEF 138 Thermoplasma acidophilum
15837832 118 LVVPLLK-DDTLIGVLDLDSPTCARFDSDDQTGIESLARVFVSSLR-- 162 Xylella fastidiosa 9a5c
13472055 118 LVVLLED-DEGVFGVLDLDSPLPGRFDKADQAGIETLAAIYAAASSFE 164 Mesorhizobium loti
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