Conserved Protein Domain Family
ksgA

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PRK00274: ksgA (this model, PSSM-Id:234708 is obsolete)
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
Statistics
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PSSM-Id: 234708
Aligned: 913 rows
Threshold Bit Score: 220.758
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
257792392   9 SVSETRAVLEAHGLSTKYSLGQNFLINDAILQKIVALA-DLVPDDYVLEVGPGIGTLTVALLKSVG-RVLSVERDPDLPA 86 
15604515    1 MLPSIVKHATSHKINPLKKHGQNFIFDSSLCDKIIRAS-NVLENSNVIEIGPGIGGLTRSILQKNPkSLTVIEIDERCIP 79 
165933603  15 MLPSIAKHAALHQVNPLRKHGQNFIFDSSLCDKIVRAS-NLAENSRVLEIGPGTGGLTRSILQKNPeSLTVIETDERCLP 93 
51473851    1 MLPSIAKHAASHQINPLKKHGQNFIFDSSLCDKIIRAS-NISENSKVIEIGPGVGGLTRSILHKNPkSLTVIEIDERCIP 79 
157826080   1 MLPSIAKHVASHQINPLKKHGQNFIFDSSLCDKIVRAS-HLAENSRVLEIGPGTGGLTRSILQKNPeSLTVIETDERFIP 79 
157804052   1 MLPSIAKHAALHHINPLKKHGQNFIFDSSLCHKIVRVS-NLEENSRVLEIGPGSGGLTRSILQKNPeSLTVIETDERFIP 79 
91205019    1 MLPSIAKHAASHQIHPLKKHGQNFIFDGSLCDKIVRAS-GLEENSNVLEIGPGTGGLTRSILHKNPkLLTVIETDERCIP 79 
157827650   1 MLPSIAKHAASHQIHPLKKHGQNFIFDGSLCDKIVRAS-GLEENSNVLEIGPGTGGLTRSILHKNPkLLTVIETDERCIP 79 
67458648    5 MLPSIAKHAASHQINPLKKHGQNFIFDSSLCDKIVRAS-NLAENSRVLEIGPGTGGLTRSILQKNPaSLTVIETDERCIP 83 
148284255   3 ELPTVSQHMKLHKITANKSLGQHFLLDSNICNKIVSVApNSITGKVVLEVGPGPGGLTRAILAHNPkKLIVIEKDASFIE 82 
257792392  87 VLaetlsPwAD-----RFALLNKDALDLCSAD-Fqsaepldaaasrgarsrgeaqgsrtevrsafalptisgttetladv 160
15604515   80 LLneiqeYyPN------LNIIKQDVLKINLTDlIy--------------------------------------------- 108
165933603  94 LLn------EIkeyypNLNIIKQDALKINLTD-Lscdivnsvgfaykkr-----------------------eakpitnr 143
51473851   80 LLneiqgYyPN------LNIIKQDVLKINLTDlIy--------------------------------------------- 108
157826080  80 LLneikeYyPN------LNIIKQDALKINLTDlDy--------------------------------------------- 108
157804052  80 LLneikeYyPN------LNIIKQDALKINLTDlGy--------------------------------------------- 108
91205019   80 LLneikqYhPN------LNIIKQDALKLKLSDlNt--------------------------------------------- 108
157827650  80 LLneikqYhPN------LNIIKQDALKLKLSDlNt--------------------------------------------- 108
67458648   84 LLneikeYyPN------LNIIKQDALKINLTDlGy--------------------------------------------- 112
148284255  83 LLheiptMpSS-----KLEVICGDALNFDLSNiEs--------------------------------------------- 112
257792392 161 agpmrllP------NKLVANLPYAVAATVVLDYFER-FAsLESATVMVQKEVADRMAASPGTKNYGAYTVKLRLYAEPAG 233
15604515  109 ------dK------VTVISNLPYHIGTELVIRLLKEvKL-ITNMTLMLQKEVVERICAIPSTKAYGRLSVICQILAKVEK 175
165933603 144 randigeSklidykVTIISNLPYHIGTELVIRWLKE-ARlITSMTLMLQKEVVERICAIPSTKAYGRLSVICQLIAKVEK 222
51473851  109 ------dK------VTVISNLPYHIGTELVIRLLKEaKL-ITNMILMLQKEVVERICAMPSTKAYGRLSVICQIVAKVEK 175
157826080 109 ------dK------VTIISNLPYHIGTELVIRWLKEaRL-ITDMTLMLQKEVVERICAMPSTKAYGRLSVICQLIAKVEK 175
157804052 109 ------dK------VTIISNLPYHIGTELVIRWLKEaRL-ITSMTLMLQKELVERICAMPSTKAYGRLSVICQLIAKVEK 175
91205019  109 ------nK------ITIISNLPYHIGTELVIRWLKEsSL-VASMTLMLQKEVVERICAKPSTKAYGRLSVICSLIATVEK 175
157827650 109 ------nK------ITIISNLPYHIGTELVIRWLKEsSL-VASMTLMLQKEVVERICAKPSTKAYGRLSVICSLIATVEK 175
67458648  113 ------dK------VTIISNLPYHIGTELVIRWLKEaRL-ITNMTLMLQKEVVERICAMPSTKAYGRLSVICQLITKVEK 179
148284255 113 ------nR------IIIISNLPYNIGTQLIVQWLHQiSF-VEYMIIMLQDEVVERIISNHCSKTYGRITVLAQIVSDVRK 179
257792392 234 RFAVGPGNFFPPPRVESAVLRLnrrpVFDDQGvplDADAIAAACTMAEAAFATRRKTLSNSCKTYfagrgpqgaavIARL 313
15604515  176 CFNVAPTAFYPHPKVYSAIVKI----IPLENPp--SIALINKVEQITKLVFAGRRKMIKSSLRNL-----------IPNI 238
165933603 223 CFDVAPTAFYPPPKVYSAIVKL----IPLENPl--SIALINKVEQITKLAFAGRRKMIKSSLKNL-----------VPNI 285
51473851  176 CFDVAPTAFYPHPKVYSAIVKI----IPLENPp--SIALINKVEQITKLVFAGRRKMIKSSLRNL-----------VPNI 238
157826080 176 CFDVSPTAFYPPPKVYSAIVKL----IPLANPp--SIALINRVEKITTFAFAGRRKMIKSSLKNL-----------VPNI 238
157804052 176 CFEVAPTAFYPPPKVYSAIVKL----TPLENLp--SIALITKVEQITKLAFAGRRKMIKSSLKNF-----------VPVK 238
91205019  176 CFDVAPTAFYPPPKVYSAIVKL----TPLENIp--NSDLISKVELITKMAFAGRRKMIKSSLKNL-----------APNI 238
157827650 176 CFDVAPTAFYPPPKVYSAIVKL----TPLENIp--NSDLISKVELITKMAFAGRRKMIKSSLKNL-----------APNI 238
67458648  180 CFDVAPTAFYPPPKVYSAIVKL----IPLENPp--SIALINKVEQITKLAFAGRRKMIKSSLKNL-----------VPNI 242
148284255 180 CFKVPSRAFNPPPKVDSSVMLV----SPKKHQl--DRHTIENVQKITKLAFSTRRKKLKNCLSHL-----------LTSI 242
257792392 314 PQLFERAGIDPRLRGETLDLPEFVRLGCAFQQIA 347
15604515  239 HEVLTQLKINCNDRAENLTPKDYLRIAMKL---- 268
165933603 286 HEVLTQLNINDNYRAENLAPQDYLRIAEIL---- 315
51473851  239 HEVLTQLKINNNDRAENLTPKDYLRIAMQL---- 268
157826080 239 HEVLTQLKINDNYRAENLAPQDYLRIAMSLSVNK 272
157804052 239 NEVLTQLNINDNYRAENLTPQDYLMIAACEMS-- 270
91205019  239 SELLAKLNISDNCRAENLTPNDYLSLASLI---- 268
157827650 239 SELLAKLNISNNCRAENLTPNDYLSLASLI---- 268
67458648  243 H--------------------------------- 243
148284255 243 NIPDEILNAQLHQRPEQLTPEQYVQLSRILL--- 273
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