Conserved Protein Domain Family
HisM

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COG0765: HisM (this model, PSSM-Id:223836 is obsolete and has been replaced by 440528)
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
Statistics
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PSSM-Id: 223836
Aligned: 190 rows
Threshold Bit Score: 141.873
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
16264848 148 FALTLLGFMlffgagkastpesimrrlgalsiglvssggllFILFfAHIAFAAGVATTVRAAIAAYLLAAIIGliwvgll 227 Sinorhizobium meliloti
16079798   1 -------------------------------------mnvsILFD-NFSMYMDGFYHTLLASVIALAGSFVLG------- 35  Bacillus subtilis
16079799   1 -----------------------------------mdfigaYSQE-HLAFLWDGFLVTLYVAFISIILSFFFG------- 37  Bacillus subtilis
15792248   1 -------------------------------------menvFNAQ-NIEFLMQGLFLTLKIALATCIISIVFG------- 35  Campylobacter jejuni
15792249  14 ILTSWGLYDensispf-------------------avwkflDALD-NKDAFINGFIYTLEVSILALLIATIFG------- 66  Campylobacter jejuni
15645784   1 -------------------------------------mgvlLELD-NLKRLLEGFETTLLIALSSAMISIIVG------- 35  Helicobacter pylori...
15900515   1 ----------------------------------mesilevLTPD-NLVFIFKGFGLTLYISLIAIILSTIIG------- 38  Streptococcus pneum...
15900516   3 DLSSWTAYf-------------------------------qDFG-----QFFNGFLFTLALAVGSFILAMVLG------- 39  Streptococcus pneum...
15900608   1 --------------------------------mqdsgiqvlFQGN-NLLRILQGLGVTIGISILSVLLSMMFR------- 40  Streptococcus pneum...
15612162   1 -------------------------------------mgvlLELD-NLKRLLEGFETTLLIALSSAIISIVVG------- 35  Helicobacter pylori...
16264848 228 qlhytartsIIFALATLGLTlvaawfllqprtaYVLAGRLDGTVAIVSNTPsgligavrfgqypgapgeeaavrtflgpa 307 Sinorhizobium meliloti
16079798  36 ---------VAVAVMRITVF-------------KPLQWLGTAYVEFIRNIP----------------------------- 64  Bacillus subtilis
16079799  38 ---------LIAGTLRYAKV-------------PVLSQLIAVLVETIRNLP----------------------------- 66  Bacillus subtilis
15792248  36 ---------TFLAITKNYGD-------------RLSKFLAACYIDIFRNTP----------------------------- 64  Campylobacter jejuni
15792249  67 ---------TIGGVMATSRF-------------KIIRAYTRIYVELFQNVP----------------------------- 95  Campylobacter jejuni
15645784  36 ---------MLLGSLMAFGS-------------QIVVLACRVYLESIRIIP----------------------------- 64  Helicobacter pylori...
15900515  39 ---------TVLAVTRNGKN-------------PVLRIISSIYIEFVRNVP----------------------------- 67  Streptococcus pneum...
15900516  40 ---------IFFGAMSTSKR-------------PILRILARIFVEFYQNTP----------------------------- 68  Streptococcus pneum...
15900608  41 ---------TVMGIIMTSHS-------------RIIRFLTRLYLEFIRIMP----------------------------- 69  Streptococcus pneum...
15612162  36 ---------MLLGSLMAFGS-------------KIMVLACRVYLESIRIIP----------------------------- 64  Helicobacter pylori...
16264848 308 eavaameknevtaallpsaavpgglpllwetaalndrdraagitfaVLAIILGLlTFGGylhrrhPLAIGsefvvdtirg 387 Sinorhizobium meliloti
16079798  65 ----------------------------------------------LLLITFVF-YFG-------LPNAG---------- 80  Bacillus subtilis
16079799  67 ----------------------------------------------LLLIIFFT-FFA-------LPEIG---------- 82  Bacillus subtilis
15792248  65 ----------------------------------------------LLLWMLAA-CFVL------PVFFG---------- 81  Campylobacter jejuni
15792249  96 ----------------------------------------------LVIQIFFL-FYAL------PVLG----------- 111 Campylobacter jejuni
15645784  65 ----------------------------------------------LLAWLFIV-YFGL------ASWFD---------- 81  Helicobacter pylori...
15900515  68 ----------------------------------------------NLLWIFTI-FLV---------------------- 78  Streptococcus pneum...
15900516  69 ----------------------------------------------LLVQFVIV-FYGL------PLISDh--------- 86  Streptococcus pneum...
15900608  70 ----------------------------------------------QLVLLFIV-YFGL------ARNFN---------- 86  Streptococcus pneum...
15612162  65 ----------------------------------------------LLAWLFIV-YFGL------ASWFD---------- 81  Helicobacter pylori...
16264848 388 ipmlvivlyVGLPLsgalkdatqgvldppnLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQTARLVV 467 Sinorhizobium meliloti
16079798  81 ---------LRLDG----------------FQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLHII 135 Bacillus subtilis
16079799  83 ---------IKLEI----------------TAAAITALTIFESAMLSEIIRSGLKSIDKGQIEAARSSGLSYTQTLFFIV 137 Bacillus subtilis
15792248  82 ----------QFPQ----------------AFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYII 135 Campylobacter jejuni
15792249 112 ----------IRLDi---------------FTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYII 166 Campylobacter jejuni
15645784  82 ---------LHISA----------------VLASVIVFSLWGGAEMMDLTRGVLTSVSKHQIESALALGLDSKKVIFNII 136 Helicobacter pylori...
15900515  79 ---------FKMKS----------------TPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYII 133 Streptococcus pneum...
15900516  87 ---------IIMIPi---------------YWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLII 142 Streptococcus pneum...
15900608  87 ---------INISG----------------ETSAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHII 141 Streptococcus pneum...
15612162  82 ---------LHISA----------------VLASVIVFSLWGGAEMMDLTRGVLTSVSKHQVESALALGLDSKKVIFNVI 136 Helicobacter pylori...
16264848 468 LPQAFRIIIPPLGNELIAILKDTS-LLSILSIRDITQRMREFQSASF-----LPFAPYNSAAIFYIFLTLAAASLINMIE 541 Sinorhizobium meliloti
16079798 136 LPQAIKIVIPPLGNQFLNLVKNSS-ILGVVAGLDLMYQADLVSSSTL-----VVFDVYIFVALFYLVLTIPLSIGVNYLE 209 Bacillus subtilis
16079799 138 MPQALRRMVPPIVSQFISLLKDTS-LAVVIALPELIHNAQIINGQSAdg--sYFFPIFLLAALMYFAVNYSLSLAARRLE 214 Bacillus subtilis
15792248 136 LPQTFRKIIPALLSQIVTTVKDTA-YLAGLGIAELTYNSKTILAKLTsf--eEILAMIGVVAGIYFIICFSLSMLVRYYA 212 Campylobacter jejuni
15792249 167 VPQTIRIILPPMTNQMVNLIKNTS-VLLIVGGAELMHSADSYAADYG-----NYAPAYIFAAVLYFIICYPLAYFAKAYE 240 Campylobacter jejuni
15645784 137 FPQSFLSLLPSSLNLFTRMIKTTA-LVSLIGAIDLLKVGQQIIELNLlrmpnASFVVYGVILMFYFSLCYSLSLYSSYLE 215 Helicobacter pylori...
15900515 134 LPQAIRKMLPAIISQFVTVIKDTSlLYSVIALQELFGASQILMGRYFep--eQVFSLYILIALIYFSFNLAISSLSHMLA 211 Streptococcus pneum...
15900516 143 LPQAFRIILPPLTNQIVNLIKNTS-TVAIISGVDLMFVTKSWSALNG-----NYIPAFLGAALLYFALCFPVAQFGRKME 216 Streptococcus pneum...
15900608 142 IPQVLRRLLPQAINLVTRMIKTTS-LVVLIGVVEVTKVGQQIIDSNRltiptASFWIYGTILILYFAVCYPISKLSTHLE 220 Streptococcus pneum...
15612162 137 FPQSFLSLLPSSLNLFTRMIKTTA-LVSLIGAVDLLKVGQQIIELNLlrmpnASFVVYGVILMFYFTLCYSLSLYSSYLE 215 Helicobacter pylori...
16264848 542 RKYDIKH 548 Sinorhizobium meliloti
16079798 210 KRLEKSY 216 Bacillus subtilis
16079799 215 VRQT--- 218 Bacillus subtilis
15792248 213 KKTAYIS 219 Campylobacter jejuni
15792249 241 NKLKKah 247 Campylobacter jejuni
15645784 216 KKFQHir 222 Helicobacter pylori 26695
15900515 212 KRWQQAA 218 Streptococcus pneumoniae TIGR4
15900516 217 QANKKay 223 Streptococcus pneumoniae TIGR4
15900608 221 KHWRN-- 225 Streptococcus pneumoniae TIGR4
15612162 216 KKFQYir 222 Helicobacter pylori J99
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