Conserved Protein Domain Family
Raftlin

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pfam15250: Raftlin (this model, PSSM-Id:405847 is obsolete and has been replaced by 464590)
Raftlin
This family of proteins plays a role in the formation and/or maintenance of lipid rafts.
Statistics
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PSSM-Id: 405847
Aligned: 17 rows
Threshold Bit Score: 580.13
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007664372  26 MGCGLNKFEKRDEKRPGNIYSTLKRPQVETKIDVSYEYRFLEFTTLNNAELPRSSAARLSSWRDLPAQLQELYQQGFALA 105 platypus
XP_014440582   1 MGCGLNKLEKRSEKRPGNIYSTLKRPQVETKVDVAYEYRFLDFTTLSTAELPRSSAVRLSSLRDLPAQLLELYQQGFSLA 80  Chinese tree shrew
XP_018879302   1 MGCGLNKLEKRDEKRPGNIYSTLKRPQVETKIDVSYEYRFLEFTTLSAAELPGSSAVRLASLRDLPAQLLELYQQGFSLA 80  western lowland...
XP_003463410   1 MGCGLRKLSDPEDSSPGKIFSTLKRPQVETKTDTAYEYLLLDFCL---QALPHPEVIRIHSVTDIPAQVEAYYLQGYVVG 77  domestic guinea...
XP_005989569   1 MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKTDIAYEYVLLDFTL---EGSSKADVININSLLDIPSKVEEYYRKGYVVV 77  coelacanth
XP_019693976   1 MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKTEFAYEYVLLDFTL---QASPNPEVIKINSIPDIVTKVEDYYLKGYIVG 77  domestic cat
XP_343572      1 MGCGLRKLEDPDESSPGKIFSTLKRPQVETKTEFAYEYALLDFTL---QASTNPEVIKINSVLDIVAKVEDYYLKGYVVG 77  Norway rat
XP_016288696   1 MGCGLRKLEDPDDSSPGKIFSTLKRPQVETKTDFAYEYVLLDFTL---EEA----------------------------V 49  gray short-tail...
XP_014316607   1 MGCGLRKLDDPEDSSPGKIFSTLKRPQVETKTEVAYEYVLLDFTL---QASPNPEVIKISSIPDIVTKVDEYYRNGYVVG 77  little brown bat
NP_001106555   1 MGCGLNKLEKLDDKRPGNIYSTLKRPHVETKIDVAYEYRYVDFTTLSQAEAPNLAAIRITSLRELPAQLRELYQQGFTVA 80  tropical clawed...
XP_007664372 106 ALHPFVQPTNEREKTPQEQIFRAVLIKKTERS-----QKTDYHNEGYILELECCSSLDHLAGQKIIPDFIKKIQDAASRG 180 platypus
XP_014440582  81 ALHPFVQPTHEWEKTPLQHIFRAILIKKTDRS-----QKTDVPNDGYVLELDCCSSLDHLTDQKIIPEFIKKVQEAASQG 155 Chinese tree shrew
XP_018879302  81 ALHPFVQPTHEREKTPLEHIFRAILIKKTDRS-----QKTDLHNEGYVLELDCCSSLEHLPDQKLIPEFIKKIQEAASQG 155 western lowland...
XP_003463410  78 ALHPILHPAGPRAPLPASHLYRAVLLRPRASPk---qQAVPSTQRCQRLVIEECPVPGDAQTSDIAKELMEKVNAAARAG 154 domestic guinea...
XP_005989569  78 AIHPTILSVGRRRHLPVSYLYRAVLSRPKPSQk----HTAHGGQRHPRLVIEEWPLKYETLTNEIVKGLLEKVNETTKRG 153 coelacanth
XP_019693976  78 AIHPVIQPVGQRKHLPASYLYRVVLLRLKLSLk---hSAASSGQRRPRLVIEECPLTYETQTNDIAKELIEKINIAAKRG 154 domestic cat
XP_343572     78 AIHPVIQPVGQRKHLPASHLYRAVLSRVKLSSk----HSAAGGQRRARLVIEECPLTCETQGNDSAKELIDKVNAAAKRG 153 Norway rat
XP_016288696  50 IFSLVIQAFRVKLSVVIR----------KHLQslsqtQTTPKGQARPRLVIEECPLSYETLTNEGAKGLIEKINEAAKRG 119 gray short-tail...
XP_014316607  78 AVHPVLQPVRQRRPLPASHLYRVVLWRLKLSPk---lSAAPSGQRRPRLVIEECPLMYETQANDVAKELIEKINEASKRG 154 little brown bat
NP_001106555  81 AIHPFVQSYDGAESIPQEQVFRAVLIKKIDRN-----PTSDLNNEEYRLETELCLSPDQPADQKIIPDLVKRIEDAASQG 155 tropical clawed...
XP_007664372 181 LKFVGVIPHYSSQVKTADGGVvtipgn----nsvetRDEENGSGLCEDRASLGNGNSGATHSLplgDPPalrdADTQRHP 256 platypus
XP_014440582 156 LKFVGVIPQYHSPPGSPASCE---------------ADARGGRGTQEGPRSLENEDLGAPDTC---DAP----AERHQSP 213 Chinese tree shrew
XP_018879302 156 LKFVGVIPQYHSSVNSAGSSApvstan----stedaRDAKNARGD---HASLENEKPGTGDAC---SAP----AGRNQSP 221 western lowland...
XP_003463410 155 MRFIGFVPQLCPPPRCCNGTEtgqgv-------gmepADAGARPGSDDSWRSTDKRPGSGSGP---VLE----GGTGEEP 220 domestic guinea...
XP_005989569 154 IKFVGFISQHGIQSRTCNGANpltetdgdletavyaKMQELKKCNPDEHCRNMLE--GTLSGQ---SSE----TGTEEEV 224 coelacanth
XP_019693976 155 MKFVGFISQPYSPLKFCNGTNhded----------iesaLPLRHTSDENCKSWNE--GTLSGQ---SSE----SGIEEEL 215 domestic cat
XP_343572    154 MRFVGFVPQHCSPSKHCNGASqdgv----------aeseLHKRQGSQDNCKSLND--GTL-------WE----SGVEEEP 210 Norway rat
XP_016288696 120 MKFVGFVTQHCPQSKVCNGTSpdgdve---sesslyRIQEHQRHNSDENCKIWNE--GTLSGQ---SSE----SGIEEEI 187 gray short-tail...
XP_014316607 155 RRFVGLLAQHSAP--FCNGTDlngd----------gepaLPGRHSCEDHGRSWSE--GPLSGQ---PSE----SGAEGEL 213 little brown bat
NP_001106555 156 SKFAGIIQGYCTAPNLPYSPSdslshc----ssplfTTAKKTFSDTEDDVSVDIDKPDGTNGN---ASL----SAHRESA 224 tropical clawed...
XP_007664372 257 etseEQrek-gpaAEQLSL--PSGVGDGEEFQdkslsvSQdlrktpdkreg---dmsgmcaeplaGKLELFTIF--NKPK 328 platypus
XP_014440582 214 ----GPgge-apvAEQPSL--PSGEGDGGEFS------PGrgsttldvpdg---tpaavrgqplpGKMEILALF--NKPK 275 Chinese tree shrew
XP_018879302 222 epssGPrge-vplAKQPSS--PSGEGDGGELS------SQgvsktldgles---dplevheeplsGKMEIFTLF--NKPK 287 western lowland...
XP_003463410 221 hq----------eGSRAQ-----GEPEGSPSPtkprkgED---------------------------PRLYAAF--NAFE 256 domestic guinea...
XP_005989569 225 hm----------eNEQHQAadCRQRREGSPQPgr---rED---------------------------MRLFAVF--N-IS 261 coelacanth
XP_019693976 216 hh----------eSEQCQ-----MDRDGSPSYsksrkgEE---------------------------NKLYTIF--NVFD 251 domestic cat
XP_343572    211 qp----------eSGQHQ-----TEGNSSLSYsnpkrgEA-------------------------PDNKVYMVF--NAFE 248 Norway rat
XP_016288696 188 hh----------eSGLWQ-----MGREGSPIPsksrkgED---------------------------NKLYTVF--NVFD 223 gray short-tail...
XP_014316607 214 hp----------qSGPCQ-----REPHGSPRSseatrgE---------------------------DNKLYIVF--NVFD 249 little brown bat
NP_001106555 225 dhskVLegegpdtGKEKQE--SALKDQGDQTAninfsiSTedvfiqdkitkadsgihdncniktsEVLAIFNKPltQQRY 302 tropical clawed...
XP_007664372 329 SQQKCRQYYTVSIPLRVSKNGQTVSSLDANWLEHMSDH-FR----KG-GVLVNAVFYLGMVN-DSFHGLTDGVFIFEDVS 401 platypus
XP_014440582 276 SHQKYRQYYPVTIPLRISKNGQTVSGLDANWLEHMSDH-FR----KG-GMLVNAVFYLGMVN-DSLHGLTDGVFIFEAIS 348 Chinese tree shrew
XP_018879302 288 SHQKCRQYYPVTIPLRVSKNGQTVSGLDANWLEHMSDH-FR----KG-GMLVNAVFYLGIVN-DSLHGLTDGVFIFEAVS 360 western lowland...
XP_003463410 257 DDAGCWSYQEGALSMKVTRKGAVVSSLDADWLELTTFY-YK----QG-FSLTDAFVCWDPPRgDPLPKSLEGFFIYEEEG 330 domestic guinea...
XP_005989569 262 DDLTCQSYHEGSLSMKVTRKGHTISTLEADWLELTTCY-YK----QG-LSLVDSFVHWETIKgDHSPKSLEGLFIYEEES 335 coelacanth
XP_019693976 252 DESTCWTYQEGILSMKVTRKGSVISTLDADWLELTTFY-YK----QG-LSLIDSFVCWETSKgDHLPKSLEGFFIYEEEG 325 domestic cat
XP_343572    249 EDSACWTYQEGILSMKVTRKGAVISTLDANWLELTTFY-YK----QG-LSLVDSFVCWETPKgDQLPKSLEGFFIYEEEG 322 Norway rat
XP_016288696 224 DESTCWTYQEGILSMKVTRKGSVISTLDADWLELTTFY-YK----QG-LSLIDSFVSWETSK-DHLSKSLEGLFIYEEEG 296 gray short-tail...
XP_014316607 250 DESTGWTYQEGILSMKVTRKGPVISTLDADWLELTTFY-YK----QG-LSLIDSFVCWETPRgDHVPKALDGFFIYEEEG 323 little brown bat
NP_001106555 303 R-----KYYTVNIPMKISKDGNIVNGLEAN------WLeYMtdhfRKgCSLVNAVFYLGMVN-EFSSEYTDGVFIFEDYP 370 tropical clawed...
XP_007664372 402 TEESKTI-QGYDAIVVEQWTVLEGVEVQTDYIPLLNSLAAYGWQLTCVLPTPIVTTNREGNLATKQIVFLQRPSLPQK-- 478 platypus
XP_014440582 349 TEDEKTI-QGYDAIVVEQWTVLDGAEVRTDYVPLLSSLAAYGWQLTCVLPTPVVRTTRDGSVSTKQVVFLQRPCLPQK-- 425 Chinese tree shrew
XP_018879302 361 TEDSKTI-QGYDAIVVEQWTVLEGVEVQTDYVPLLNSLAAYGWQLTCVLPTPVVKTTSEGSVSTKQIVFLQRPCLPQK-- 437 western lowland...
XP_003463410 331 SGVPGAPrRGHDAIVVEQWTVIEGASVKADYGPLLHTLAEFGWLLTSVLPTPVLRQDRDGNLATKQVVFLQRPALRSS-- 408 domestic guinea...
XP_005989569 336 SGVSRSNrKGNDSIVVEQWTVIEGCDVKTDYGPLLHTLAEFGWLLTCVLPTPIIRHDSEGNLATKQVVFLQRPVMFNTdl 415 coelacanth
XP_019693976 326 SGVPGSSrKGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVMWNS-- 403 domestic cat
XP_343572    323 SGVPGSNrRGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVTWNS-- 400 Norway rat
XP_016288696 297 SGVPGSNrKGNDAIVVEQWTVIEGCEIKTDYGPLLHTLAEFGWLLTSVLPTPILRHDSEGNLATKQVVFLQRPVMWNS-- 374 gray short-tail...
XP_014316607 324 SGVPGSSrTGNDAIVVEQWTVIEGCEIKTDYAPLLHTLAEFGWLLTSVLPTPVLRHDSEGNLATKQVVFLQRPALWNS-- 401 little brown bat
NP_001106555 371 EQDPKII-KRYDAIVVEQWTILQGLEVHTDYMPLLNSLAVYGWQLTCVISTPIVKTSRDGNVTTKQIVFLQRPALPHK-- 447 tropical clawed...
XP_007664372 479 AKKKESKFQWRFSRE-DMHSRQVKKS-KAKLSTREK 512 platypus
XP_014440582 426 SKKKDSKFQWRFSRE-EVRSRRARKS-KGQLGARDA 459 Chinese tree shrew
XP_018879302 438 IKKKESKFQWRFSRE-EMHNRQMRKS-KGKLSARDK 471 western lowland gorilla
XP_003463410 409 VARSLE-GEGRILRG-ENQNQACSGSpGSKGCTQPp 442 domestic guinea pig
XP_005989569 416 LMDKTEKKSTKQVKS-DEKSNPSNRSvGVDSNNCIH 450 coelacanth
XP_019693976 404 AAQTPERKASRHTKG-EDRNKVTSRSiGLDTATSQp 438 domestic cat
XP_343572    401 AAQTPERKGGRLLRG-EDRNKVGSRSiGLDTSEcqp 435 Norway rat
XP_016288696 375 AVQTPEKKSMRQIKTrEEKSKVTSRSiGLDTATSrp 410 gray short-tailed opossum
XP_014316607 402 AAQTPERKASRHVKG-EDRHRVGSRSiGLDTATSPp 436 little brown bat
NP_001106555 448 LKKKEPKFQWRFSKD-DKHNRQSK---KGKGNSKEH 479 tropical clawed frog
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