Conserved Protein Domain Family
COG4251

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COG4251: COG4251 (this model, PSSM-Id:226702 is obsolete and has been replaced by 443393)
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms]
Statistics
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PSSM-Id: 226702
Aligned: 7 rows
Threshold Bit Score: 992.71
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
12230457   1 MRIDVESQ------NINVTSLKEAPIHLSGQIQPHGVLLVLEEPGLKILQVSNNTWGILGINAENILQKKLEDLLDSFQI 74  Nostoc sp. PCC 7120
15889282   4 ERLEKVMSs----hTPKLDSCGAEPIHIPGAIQEHGALLVLSAREFSVVQASDNLANYIG------VDLPIGAVATEANL 73  Agrobacterium tumef...
15889444   1 --MASTDY------HVDLTNCDREPIHIPGYIQPHGCLIACDNAMRMVLRHSENCGELLGLEG-DLNGRTAEDVLGKKLV 71  Agrobacterium tumef...
12229721   4 DPLPFFPPlylggpEITTENCEREPIHIPGSIQPHGALLTADGHSGEVLQMSLNAATFLGQEPTVLRGQTLAALLP-EQW 82  Deinococcus radiodu...
12229707   1 --MTSITP-------VTLANCEDEPIHVPGAIQPHGALVTLR-ADGMVLAASENIQALLG------FVASPGSYLTQEQV 64  Pseudomonas aeruginosa
12230474   1 MNINDITIp----fQVDLSNCSKEPIHIPGLIQPHGVLLVLQEVDLTILQVSNNTFNILGRHPEQLLNQHLSCLLEAEQL 76  Nostoc sp. PCC 7120
2499558    1 MATTVQLS------DQSLRQLETLAIHTAHLIQPHGLVVVLQEPDLTISQISANCTGILGRSPEDLLGRTLGEVFDSFQI 74  Synechocystis sp. P...
12230457  75 ERIQSGLSSGNLEFINP--TKIWIRKKGddyaVFDAVFHRnTEGFLILELEPAITQENIPFLSFYHLAKASINQLQKTAN 152 Nostoc sp. PCC 7120
15889282  74 PFISVLSAWYSGEESNF--RYAWAEKKL------DVSAHR-SGTLVILEVEKAGVGESAEKL-MGELTSLAK-YLNSAPS 142 Agrobacterium tumef...
15889444  72 HDLRNALTVTGRTTRPAmlPAMETSDGR----SFDISLHR-YKSTTIIEFEP--SGSDAQPLG--TARKMVD-RIREADS 141 Agrobacterium tumef...
12229721  83 PALQAALPPGCPDALQYraTLDWPAAGH-----LSLTVHR-VGELLILEFEP---TEAWDST-GPHALRNAMFALESAPN 152 Deinococcus radiodu...
12229707  65 GPEVLRMLEEGLTGNGPwsNSVETRIGEh---LFDVIGHS-YKEVFYLEFEIR-TADTLSITSFTLNAQRIIAQVQLHND 139 Pseudomonas aeruginosa
12230474  77 SLLKDCLAQEDLQIINP--LEFIIKSHNes-iSFDVIAHR-SNNLLILELEANLSDKTHSFFRFYHLVKLAMLKLQGTAT 152 Nostoc sp. PCC 7120
2499558   75 DPIQSRLTAGQISSLNP--SKLWARVMGddfvIFDGVFHRnSDGLLVCELEPAYTSDNLPFLGFYHMANAALNRLRQQAN 152 Synechocystis sp. P...
12230457 153 LRDFCQIIVQEVRKVTDFDRVMLYKFDDDGHGSVIAEEKLDSLEPYLGLHYPESDIPKPARKLFISNSIRVIPNAQAQAI 232 Nostoc sp. PCC 7120
15889282 143 LEDALFRTAQLVSSISGHDRTLIYDFGLDWSGHVVAEAGSGALPSYLGLRFPAGDIPPQARQLYTINRLRMIPDVDYKPV 222 Agrobacterium tumef...
15889444 142 VESLISRTTRLVKATLGYDRVMIYRFQEDGAGKVVSEAKQPELESFLGQYFPASDIPQQARALYLKNTLRIISDASGTRI 221 Agrobacterium tumef...
12229721 153 LRALAEVATQTVRELTGFDRVMLYKFAPDATGEVIAEARREGLHAFLGHRFPASDIPAQARALYTRHLLRLTADTRAAAV 232 Deinococcus radiodu...
12229707 140 TASLLSNVTDELRRMTGYDRVMAYRFRHDDSGEVVAESRREDLESYLGQRYPASDIPAQARRLYIQNPIRLIADVAYTPM 219 Pseudomonas aeruginosa
12230474 153 TTEISQILAQEVRKITGFDRVMVYRFDEQWNGKVIAEVKPEYLTSYLGLNYPASDIPQQARKLYSQNWLRLIPDAKYQPV 232 Nostoc sp. PCC 7120
2499558  153 LRDFYDVIVEEVRRMTGFDRVMLYRFDENNHGDVIAEDKRDDMEPYLGLHYPESDIPQPARRLFIHNPIRVIPDVYGVAV 232 Synechocystis sp. P...
12230457 233 QMIPALNPVSDRPVDLTNSILRSAANCHLEYLHNMGVGASLTISLIKDNKLWGLIACHHLSAKYVSYELRKACEFLGRVI 312 Nostoc sp. PCC 7120
15889282 223 PIRPEVNAETGAVLDMSFSQLRSVSPVHLEYMRNMGTAASMSVSIVVNGALWGLIACHHATPHSVSLAVREACDFAAQLL 302 Agrobacterium tumef...
15889444 222 PVLPAVD-VSGEPLDLSYAHLRSVSPIHCEYLRNMGVAASMSISVIVDGALWGLIACHHYSPRVLSMPVRIAAEMFGEFF 300 Agrobacterium tumef...
12229721 233 PLDPVLNPQTNAPTPLGGAVLRATSPMHMQYLRNMGVGSSLSVSVVVGGQLWGLIACHHQTPYVLPPDLRTTLEYLGRLL 312 Deinococcus radiodu...
12229707 220 RVFPALNPETNESFDLSYSVLRSVSPIHCEYLTNMGVRASMSISIVVGGKLWGLFSCHHMSPKLIPYPVRMSFQIFSQVC 299 Pseudomonas aeruginosa
12230474 233 PIVPINNPLNDQPLDLSRSVLRSVSPLHIEYMQNMGVTASMSISIMKNQKLWGLIACHHQSPKYIPYEIRSACEFLGQMT 312 Nostoc sp. PCC 7120
2499558  233 PLTPAVNPSTNRAVDLTESILRSAYHCHLTYLKNMGVGASLTISLIKDGHLWGLIACHHQTPKVIPFELRKACEFFGRVV 312 Synechocystis sp. P...
12230457 313 FAEISAREETEDYDYRMNLTHIQSLLVEYMSQEDNFVDGLIK---HQPSLLDLTSAQGAAVCFGDHCTLIGETPKAEDLV 389 Nostoc sp. PCC 7120
15889282 303 SMRIAMEQSSQDASRRVELGHIQARLLKGMAAAEKWVDGLLGgegEREDLLKQVGADGAALVLGDDYELVGNTPSREQVE 382 Agrobacterium tumef...
15889444 301 SMHLQVLKQKRRLDTINHAHAALDRFLRLAAHHANIEELLVD---SFQDFADLMPCDGVGLWVGNNWHGHGATPPHDAIP 377 Agrobacterium tumef...
12229721 313 SLQVQVKEAADVAAFRQSLREHHARVALAAAHSLSPHDTLSD---PALDLLGLMRAGGLILRFEGRWQTLGEVPPAPAVD 389 Deinococcus radiodu...
12229707 300 SAIVERLEQGRIAELLRVSTERRLALARRARDADDLFGALAH---PDDGIAALIPCDGALVMLGGRTLSIRGDFER-QAG 375 Pseudomonas aeruginosa
12230474 313 SVEMSAKEDSEDTEDKIQVKSVHSKLVQYMSAENDFINALID---HQPNILDLVKAQGAAVCFNGNSCTVGQVPPMPDIQ 389 Nostoc sp. PCC 7120
2499558  313 FSNISAQEDTETFDYRVQLAEHEAVLLDKMTTAADFVEGLTN---HPDRLLGLTGSQGAAICFGEKLILVGETPDEKAVQ 389 Synechocystis sp. P...
12230457 390 FLVQWLKNNVEEEVFYTDSLPQVYPDAERYKNVASGLLAIPISQ--RNYVLWFRPEVIQTVNWGGDPNQPFEVNKLdgNV 467 Nostoc sp. PCC 7120
15889282 383 ELILWLGEREIADVFATDNLAGNYPTAAAYASVASGIIAMRVSElhGSWLIWFRPEVIKTVRWGGDPHKTVQESGR---- 458 Agrobacterium tumef...
15889444 378 RLARFVASASEGRVWATHALSQAIPEAEIYAGTAAGMLAIPLSQvkSDYLLFFRKEIVQNLNWAGNPEKSYETGPMg--D 455 Agrobacterium tumef...
12229721 390 ALLAWL-ETQPGALVQTDALGQLWPAGADLAPSAAGLLAISVGEgwSECLVWLRPELRLEVAWGG--ATPDQAKDD---- 462 Deinococcus radiodu...
12229707 376 NVLQRLQRDPERDIYHTDNWPQPSEDSPDGG-DCCGVLAIRFHRqeSGWIFWFRHEEVHRIRWGGKPEKLLTIGPS--GP 452 Pseudomonas aeruginosa
12230474 390 VLVEWMSQNIHEEIFATDSLATVYPDAEKLRDVASGLIALSISRsqKNYILWFRPEVVRTVDWGGNPHKPVEVIANg-EI 468 Nostoc sp. PCC 7120
2499558  390 YLLQWLENREVQDVFFTSSLSQIYPDAVNFKSVASGLLAIPIAR--HNFLLWFRPEVLQTVNWGGDPNHAYEATQEdgKI 467 Synechocystis sp. P...
12230457 468 RLCPRKSFELWKETVRLTSLPWRYVEIRAALELRKAIVNIVLRQADELAQLAHDLERSNAELKKFAYVASHDLQEPLNQV 547 Nostoc sp. PCC 7120
15889282 459 -IHPRKSFEIWKEQLRNTSFPWSEPELAAARELRGAIIGIVLRKTEEMADLTRELQRTNKELEAFSYSVSHDLRAPFRHI 537 Agrobacterium tumef...
15889444 456 RLTPRKSFAIWKETVRLQAQPWSEADREIAEAARIALVEVAFHHSELMAGER---ERAEVRQRMLNEELNHRVKNVLAII 532 Agrobacterium tumef...
12229721 463 -LGPRHSFDTYLEEKRGYAEPWHPGEIEEAQDLRDTLTGALGERLSVIRDLNRALTQSNAEWRQYGFVISHHMQEPVRLI 541 Deinococcus radiodu...
12229707 453 RLTPRGSFEAWEEVVRGHSTPWSETDLAIAEKLRLDLMELCLNHAAEVDRMR----------QRLIAVLGHDLRNPLQSI 522 Pseudomonas aeruginosa
12230474 469 RLSPRKSFDLWKETVLLKSQPWKSHEVNAALELRSAIIGIVLQKADELAQLNIELERSNQELDAFAYIASHDLKEPLRGI 548 Nostoc sp. PCC 7120
2499558  468 ELHPRQSFDLWKEIVRLQSLPWQSVEIQSALALKKAIVNLILRQAEELAQLARNLERSNADLKKFAYIASHDLQEPLNQV 547 Synechocystis sp. P...
12230457 548 ANYVQLLEMRY---QDQLDADANEFIT-FAVEGVSLMQTLIDDVLAYSKVDTQAIAFQ-LTEVEKALDKALGNLRQRIAE 622 Nostoc sp. PCC 7120
15889282 538 VGFAQLLRER----SDALDEKSLHYLQ-MISEAALGAGRLVDDLLNFSQLGRTQLTLK-PVDMQKVVSEVRRSLSHAVSD 611 Agrobacterium tumef...
15889444 533 KSLVGNPSQE-----GKTLQEYVTALKgRIQALSFAHDQIIRGEGGGALRDLLEAELS---PHRSPETTVKLEGPQITLD 604 Agrobacterium tumef...
12229721 542 SQFAELLTRQPraqDGSPDSPQTERITgFLLRETSRLRSLTQDLHTYTALLSAPPPVRrPTPLGRVVDDVLQDLEPRIAD 621 Deinococcus radiodu...
12229707 523 SMAAALLSSS-----DTRTTELRQHISaSSSRMERLVSQILDMSRLQSGIGLTVNPVD--TDVSQLVRQIVCETDVAYPG 595 Pseudomonas aeruginosa
12230474 549 HNYSNFLMEDY---GEIIDAPGKEKLL-TLIRLTQRMEDLIDSLLHFSRLGRVDLSMQ-DTDLNEIVHRILDMLSGRIEE 623 Nostoc sp. PCC 7120
2499558  548 SNYVQLLEMRY---SEALDEDAKDFID-FAVTGVSLMQTLIDDILTYAKVDTQYAQLT-FTDVQEVVDKALANLKQRIEE 622 Synechocystis sp. P...
12230457 623 TGANITHDP-LPTVMAGSTQLMQLFQNLIANAIKFRSEE-APQIHIG-AERLEDEWLFSVRDNGIGIDPQFSDRIFVIFQ 699 Nostoc sp. PCC 7120
15889282 612 RQIEWRIGA-LPVIFGDPTLLRQVWYNLIENAIKYSSREpVSIITIS-AVETEDDVTYSVEDNGVGFDMAYYNKLFGVFQ 689 Agrobacterium tumef...
15889444 605 SRAFSVMALvLHELATNAAKYGALSQNGGQLHVRWDVNE-NRDCEIS---WRETLLTTLPAPSRAGFGTALISRSIPYDL 680 Agrobacterium tumef...
12229721 622 TGASIEVAPeLPVIAADAGLLRDLLLHLIGNALTFGGPE--PRIAVR-TERQGAGWSIAVSDQGAGIAPEYQERIFLLFQ 698 Deinococcus radiodu...
12229707 596 LVIEIAIDP-QVRAVVDPDRYAQVAANLLSNARHHGLPG--RPVLVT-LTRQGDEVCLSVLNETSGLSEAQLANLFEPFK 671 Pseudomonas aeruginosa
12230474 624 TGVEIRILQlLPVVYCDRIQIGEVFSNLIANSIKYNDKA-NKWIEIGyIDNPPLPPTFYVRDNGIGIREKHFETIFRIFK 702 Nostoc sp. PCC 7120
2499558  623 SGAEIEVGS-MPAVMADQIQLMQVFQNLIANGIKFAGDK-SPKIKIW-GDRQEDAWVFAVQDNGIGIDPQFFERIFVIFQ 699 Synechocystis sp. P...
12230457 700 RLHTRDEYHG--TGMGLAICKKIIECHRGRIWVESQLGEGATFYFTIPVGGRERERRN 755 Nostoc sp. PCC 7120
15889282 690 RLQRVEDFEG--TGIGLALVRRIVERHHGLVGAEGTVGEGATFSFTLPVTKVEEEKIA 745 Agrobacterium tumefaciens str. C58 (Cereon)
15889444 681 GGRSTIRYLP--NGLEAEILLPFRHVSSVSAAFETK-TEAETLPQPRRYNREEPlkvl 735 Agrobacterium tumefaciens str. C58 (Cereon)
12229721 699 RLGSLDEALG--NGLGLPLCRKIAELHGGTLTVESAPGEGSTFRCWLPDAGPLPGAAD 754 Deinococcus radiodurans
12229707 672 RESADNQRNRngLGIGLYISQAIAQAHQGRIDVDCR-DDVITFCLRLPVRQAETGSSS 728 Pseudomonas aeruginosa
12230474 703 RLHSPSKYGGg-TGAGLTIAKKIVERHGGKIWVESTYGEGSTFYFTLQDV-------- 751 Nostoc sp. PCC 7120
2499558  700 RLHTRDEYKG--TGMGLAICKKIIEGHQGQIWLESNPGEGSTFYFSIPIGN------- 748 Synechocystis sp. PCC 6803
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