Conserved Protein Domain Family
7tmA_OR5M-like

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cd15412: 7tmA_OR5M-like 
olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320534
Aligned: 11 rows
Threshold Bit Score: 430.667
Created: 17-Jan-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGP4        23 VLFFIIFLVVYIITMVGNIGMMVLIKVSPQLNNPMYFFLSHLSFVDVWFSSNVTPKMLENLLSDkKTITYAGCLVQCFFF 102 human
NP_001000299  25 PVLFVVFLLIYLITVTGNVSMIFLIRSDSKLHTPMYFFLSHLSFVDLCYATTVAPQMLVNFLSKrKNISFIGCMIQFHFF 104 Norway rat
Q8NGP6        24 ILLFTLFLAIYMVTVAGNLGMIVLIQANAWLHMPMYFFLSHLSFVDLCFSSNVTPKMLEIFLSEkKSISYPACLVQCYLF 103 human
Q6IEU7        25 KILFGVFLAIYLITLAGNLCMILLIRTNSQLQTPMYFFLGHLSFVDICYSSNVTPNMLHNFLSEqKTISYAGCFTQCLLF 104 human
Q8VFL5        31 PLLFVLFLVIYLITVGGNLGMMVLIRIDSRLHTPMYYFLASLSCLDLCYSTNVTPKMLVNFLSEkKTISYAACLVQCYFF 110 house mouse
Q96RB7        25 SLLFVLFLVVYLVTLLGNLGMIMLMRLDSRLHTPMYFFLTNLAFVDLCYTSNATPQMSTNIVSE-KTISFAGCFTQCYIF 103 human
AAI19448      30 PILFLVFLTIYLITLTGNFGMILLIRFTPQLQTPMYFFLTHLACVDIFYSTNVSPQMLVNFLSEkKTISYIGCLTQCFVF 109 house mouse
XP_003469461  23 PLLLALFLLASLVTTLGNLGMVELIGLDSRLHMPMYFFLTHLGLVDLCYIFSATLKMLTNFLSDrETISFAGCFTQYYVF 102 domestic guinea...
ERE77954      25 LPLFVVFLVIYLITLVGNLGMILLIKADSRLHTPMYYFLSHLAFIDLCYSSSIGPKMLQNLLVKkKTISFSGCFAQLYFS 104 Chinese hamster
XP_007664788  25 ILLFVIFLVIYLITLIGNLGMMGLIRISSRLHTPMYFFLSHLSFVDICYASSIAPKLLANVFVKiKTISFSGCFTQMYFS 104 platypus
XP_007439676  25 VVLFAMFLIIYIITLSANLGIILLIKMDPQLHTPMYFFLSHLAFLDASYSSTVTPKAIGSFFAKkKTISLIGCAIQFYIF 104 Burmese python
Feature 1        #  #                                            # #####                         
Q8NGP4       103 IALVHVEIFILAAMAFDRYMAIGNPLLYGSKMSRVVCIRLITFPYIYGFLTSLAATLWTYgLYFCGKIEINHFYCADPPL 182 human
NP_001000299 105 ISLVITDYYMLAVMAYDRYVAICKPLLYTSKMSRGVCLSLVMTQYIYGFVNGLIQTILMLrLTFCGPNEINHFYCADPPL 184 Norway rat
Q8NGP6       104 IALVHVEIYILAVMAFDRYMAICNPLLYGSRMSKSVCSFLITVPYVYGALTGLMETMWTYnLAFCGPNEINHFYCADPPL 183 human
Q6IEU7       105 IALVITEFYFLASMALDRYVAICSPLHYSSRMSKNICISLVTVPYMYGFLNGLSQTLLTFhLSFCGSLEINHFYCADPPL 184 human
Q8VFL5       111 IAMVITEYYMLAVMAYDRYMAICNPLLYSSKMSKGVCVRLIAGPYIYGFLSGLMETMWTYrLTFCGSNIINHFYCADPPL 190 house mouse
Q96RB7       104 IALLLTEFYMLAAMAYDRYVAIYDPLRYSVKTSRRVCICLATFPYVYGFSDGLFQAILTFrLTFCRSSVINHFYCADPPL 183 human
AAI19448     110 VTLLLTEYYMLGAMAYDRYMAICKPLHYSTKMSRPVCICLVTFPYFWGSMVGTMQVILTSrLSFCGPNTINHFYCADPPL 189 house mouse
XP_003469461 103 IALLPMELSMLAVIIYDHYMAICLPLHDTVKMSWPVCISLATLPYDHNFSDGLLHIILTFrLTFCRSSVINHFYSVDPTL 182 domestic guinea...
ERE77954     105 GAFSTTECFLLATMAYDRYMAICNPLIYTAIMTQRVCTELVVGVYTYGFLNSVIQTVLTFqLSFCSSNVIPHFYCADPPL 184 Chinese hamster
XP_007664788 105 SALVTTECFLLAAMAFDRFVAICNPLLYAVIMSNRVCSELALAAYIYGFLNSLIQTAMTLqASFCNSNAINHFYCAHPPL 184 platypus
XP_007439676 105 DGLVMTELFLLSVMAYDRYVAICNPLLYSVVMSKRLCTVLVSSVYVYGFVSSVVQTALTFtLSFCRSNVINHFYCNDPPL 184 Burmese python
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q8NGP4       183 IKMACAGTFVKEYTMIILAGINFTYSLTVIIISYLFILIAILRMRSAEGRQKAFSTCGSHLTAVIIFYGTLIFMYLRRPT 262 human
NP_001000299 185 MVLACSDTYVKKTAMFVVAGSNLSCSLTIILISYIFIFTAILRMRSAEGRRKAFSTCGSHLTAVTIFYGTLFCMHLRPPS 264 Norway rat
Q8NGP6       184 IKLACSDTYNKELSMFIVAGWNLSFSLFIICISYLYIFPAILKIRSTEGRQKAFSTCGSHLTAVTIFYATLFFMYLRPPS 263 human
Q6IEU7       185 IMLACSDTRVKKMAMFVVAGFTLSSSLFIILLSYLFIFAAIFRIRSAEGRHKAFSTCASHLTIVTLFYGTLFCMYVRPPS 264 human
Q8VFL5       191 IRLSCSDTFIKETSMFVVAGFNLSNSLFIILISYLFILIAILRMRSAEGRRKAFSTCGSHLVAVTVFYGTLFCMYVRPPT 270 house mouse
Q96RB7       184 IKLSCSDTYVKEHAMFISAGFNLSSSLTIVLVSYAFILAAILRIKSAEGRHKAFSTCGSHMMAVTLFYGTLFCMYIRPPT 263 human
AAI19448     190 LMLTCSDTYIKQTALFVSAGINLTGSLLIILISYIFIFITIMRIRSSEGQRKAFSTCGSHLTAVTMFYGSLFCMYLRPAN 269 house mouse
XP_003469461 183 IKLSYSDSYVKEYAMFISADFNLSTSLSIILVSYACIVTTVLRILSTEGQCKAFSICGSHLTGITLFYGTLFCIYIRPPI 262 domestic guinea...
ERE77954     185 LALSCSDTHNKERQLLIFSAVNLTGSLMTVLISYICILVSIIKIQSSQGKCKAFSTCASHLTVVTIFYGTLFFMYLQQPK 264 Chinese hamster
XP_007664788 185 LSLSCSDIHVKEKQIFFISTLNLVSSLLVVLLSYCCIFVVVLKFPSREERCKAFSTCVTHLTVIALFYGTLFSMYFQEPY 264 platypus
XP_007439676 185 LALSCSDTRPKEIQLLALSGINLSSSLLTIIVSYVYILCTIFGKHSTGRRHRAFSTCASHLTAVIIFYGTLFFMYLQPSS 264 Burmese python
Feature 1            ## ###  #  ##                       
Q8NGP4       263 Ee-SVEQGKMVAVFYTTVIPMLNPMIYSLRNKDVKKAMMK 301 human
NP_001000299 265 Et-SVEQGKIVAVFYIFVSPMLNPFIYSLRNKDVKNAIRK 303 Norway rat
Q8NGP6       264 Ke-SVEQGKMVAVFYTTVIPMLNLIIYSLRNKNVKEALIK 302 human
Q6IEU7       265 Ek-SVEESKIIAVFYTFLSPMLNPLIYSLRNRDVILAIQQ 303 human
Q8VFL5       271 Dk-SVEQSKIIAVFYTFVSPMLNPIIYSLRNKDVKHAFWK 309 house mouse
Q96RB7       264 Dk-TVEESKIIAVFYTFVSPVLNPLIYSLRNKDVKQALKN 302 human
AAI19448     270 Er-SVEQGKIIAVFCIFVSPMVNPFIYSLRNKDVKQALRR 308 house mouse
XP_003469461 263 De-TVEKSKIIAVFCTFISPTVNLLMYSVRNKDVKQALKD 301 domestic guinea pig
ERE77954     265 SgnSWRYSKVVSVFYSLVIPMLNPVIYSLRNTEVKDTLKR 304 Chinese hamster
XP_007664788 265 TnhALPYDKAASVFYSLIVPMLNPLIYSLRNRDVKEALRK 304 platypus
XP_007439676 265 Th-SLSYDKVVSVFYAVVIPMLNPLIYSLRNKEVKGALEK 303 Burmese python

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