Conserved Protein Domain Family
YdbT

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COG3428: YdbT (this model, PSSM-Id:225962 is obsolete and has been replaced by 442654)
Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain [Function unknown]
Statistics
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PSSM-Id: 225962
Aligned: 8 rows
Threshold Bit Score: 442.258
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15927648   1 MSEPQKLH-----PISYFNGIINAIKQNIVVFFIFiiFQLKDFDYTNPESy-------LWIGIVFVFFLISYISQ--IVG 66  Staphylococcus aure...
15614284   1 MNELKRLH-----PASMLVSFMISLRGMLVPLVVS----FFLGTSATG----------FQFQYIFYGLLIFSFLSg-FLD 60  Bacillus halodurans
16077527   2 MSEPKRLH-----PVAVILNLCHTIIQTIKNIILP--FFFVYIVNSNHTVr-------FYGAIALGVLFIWLVAAs-IIK 66  Bacillus subtilis
19551872   2 SSLEGFRKvhratPFLRIWTIIVAVLAAFAFNSGAsvLSFIWGVVTGEYGfavlpillTVGGAVIVVALAWIITG---IW 78  Corynebacterium glu...
15840670   2 TDRPHDWHrl--sPRMLLVHPVHEMLRQLPVLIGS----VVLGSATGNP---------VWPLAALGVTVVFGVL-----R 61  Mycobacterium tuber...
15608366   2 TDRPHDWHrl--sPRMLLVHPVHEMLRQLPVLIGS----VVLGSATGNP---------VWPLAALGVTVVFGVL-----R 61  Mycobacterium tuber...
15790382   2 KLHPLSVPvr-alSRALGFGWAFLIGGAALSGGNA----ALTGVAVLG------------VMVAVVAVVAYEIA-----Y 59  Halobacterium sp. N...
16799955   1 MFEERRLH-----PIALIKEIITNVRRNIVPIVVGl-FSVFRAINSNGYLp-------NWAVYLIIVIVILLVLTpaVLK 67  Listeria innocua
15927648  67 IMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVDMTQGVVNQIIGGVDLQIKTPSDgivlsViSKKQGEYLERYIDQL 146 Staphylococcus aure...
15614284  61 WITFRYRLSEHELYVQRGILIRKKRYIQKHRVQSIDVTAGIFQRLFGLVKVKIETAG--------GGAEPEVELLAITKR 132 Bacillus halodurans
16077527  67 WRRFTYRIEDDEFRIEEGLFVTKKRYISIDRIQTMNTSAGLVQQIFKLVKLQIETAGG-----G-KEAEAVLS--AISVE 138 Bacillus subtilis
19551872  79 WKAVGFRITNEEVQLQRGVISKDLRTARFDRIQAVDLVESFIARIFRLAEVRIETAG--------GSDSAI----SIGFL 146 Corynebacterium glu...
15840670  62 WFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTG---------QEARG-----EAAFE 127 Mycobacterium tuber...
15608366  62 WFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGTG---------QEARG-----EAAFE 127 Mycobacterium tuber...
15790382  60 YRRFDYELTEDSLDIASGVFSRREREIPLRRVQNVDVTRSLVARLLGLAVVDVETAGG-----GsTEASLRFVSREAAAD 134 Halobacterium sp. N...
16799955  68 YITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTVQKKQWFFFIPFNVCQILIETAGG-----N-GKAEADLVAVPVSVV 141 Listeria innocua
15927648 147 QTELKTEVAQKSSAEKNDNCNHDIEGNVEDIAEGRLDEVQntdsmlnqknkRIpiYqMNFKESLFMAMTSGAIGVTLAAL 226 Staphylococcus aure...
15614284 133 EAQFLREQLLEKRQLLETEWLDDSDEDEKEKVASTIPLFT-----------LG------KTRLWIAAITSSGIGLTLSAI 195 Bacillus halodurans
16077527 139 EAERIKEAVFKKKAQRRENELDEERLEAEEELDPSVEVQE-----------HY--R-MNAKELLMAASTSGGIGVIISAV 204 Bacillus subtilis
19551872 147 RKSEAEALKRELLDASQHSVATTPAGVPAEPG---------------------------VGETVVVESAGDVLVPQIPVQ 199 Corynebacterium glu...
15840670 128 LDA-VDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWL-----------RYa-PlSFSGLVMIGAVIGLGYQTGLAVR 194 Mycobacterium tuber...
15608366 128 LDA-VDSARVPRLRALLLAESLAPVEPTGRVLARWQSSWL-----------RYa-PlSFSGLVMIGAVIGLGYQTGLAVR 194 Mycobacterium tuber...
15790382 135 LQADVRTRRTTPGDAADAATAATPDAGGADSESRSAADRA-----------REptPvGERGELLFALSNRDLLLYGLLSF 203 Halobacterium sp. N...
16799955 142 DELKDLRDGKKAAKQDEVKETEEPEVEVLETEEAPEKTVM-----------LQ-----TKQLILMAVTSGGVFGTLLIVL 205 Listeria innocua
15927648 227 VP--IYGAVRELIPWSKLNHEISQWVQIVSISVLIIILLVLIVAYIIGTIITMIRFYGFSVMLE--NEQLKIEYGLFNKK 302 Staphylococcus aure...
15614284 196 GA--LYSQLQQFIPDTVYEQTFGWFTASSVWLVVIVAFTLTVIAWVLSILATMSKYWNHQVQAAkqGRELIITRGLLETR 273 Bacillus halodurans
16077527 205 FA--LISQLDEVLPMDWLFDKFSFLQHASIGIYAVLIFIGLFIAWIFSIAGMMFRYANFQIIKK--EQELVISRGIIEKH 280 Bacillus subtilis
19551872 200 RTlaSTALSLATIITAIGIVILLFVP-FGVSIAVPFFVGMVPAVWNLIDKS--WQFTATQR-----NDVLHVSYGLANRR 271 Corynebacterium glu...
15840670 195 LP--ESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQE------GVLHLRHGLLRVR 266 Mycobacterium tuber...
15608366 195 LP--ESGFARSAVDAAQRAGVVLVVAVTVLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQE------GVLHLRHGLLRVR 266 Mycobacterium tuber...
15790382 204 NPrlFSGIIAVATVAAPSLGGRMAVPDVGMVVLVAGAVALALGVWLVSAAVRVVQFYGFRLRRV--GGDLRYERGLFERR 281 Halobacterium sp. N...
16799955 206 AF---MQQFREVIPTDWMEAQAEELWKMGIIVLIVLIVLILLVLWGISIVTTLFKYFQFKLMKY--PNSLVVEKGLLERN 280 Listeria innocua
15927648 303 KVTVPTKRLQAVVERQSYIRRLFGYTAIHFIITSdFenkkiEDDDNDSGSVPILPFIKRDKAYQIIQNLVPDLSYQQVNE 382 Staphylococcus aure...
15614284 274 QLTLQTKRVTAVRLVSNLFRQPFGYTSVYVESKG-------GGSSDEQLSTVLFPLVRKSEVNGLLAKCLPEYQLEDQTI 346 Bacillus halodurans
16077527 281 QVTIPLRKIQAIKIKENIIRQLFGFVTVSIVSAGgG-----DREKEEGALTILFPMIHKKKLPHMLRTFTPEYTLEENCR 355 Bacillus subtilis
19551872 272 KQSIPLGRIHAVKLKQPLLWRLVGWWTVTVTVVG-------YGDTTQGGTSKILPVGSKELALKVLEAVGPLNSADIAES 344 Corynebacterium glu...
15840670 267 EHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG-V-----HGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRH 340 Mycobacterium tuber...
15608366 267 EHTYDMRRLRGATLREPLLVRLLRGARLDAVMTG-V-----HGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRH 340 Mycobacterium tuber...
15790382 282 DGTIPLSKLQTVSVEDSVLMRRYGFASLAVETAGyA-----PGQSPSGGSEAAVPIAPRAAVFELAREIEPVADIDLSRP 356 Halobacterium sp. N...
16799955 281 HTTISLARIQGITIIESPLRQMLGLVAVKVITAG-N-----SGDEKQSGDILLLPIMKKELALKTLKEMLPDYLFEIEEM 354 Listeria innocua
15927648 383 G---MPLSGFHRHFLIPSIIVIAMAGIGCYFWNQLLLlFtiITIVIIGLFVIKGYLYVKHAGFKMTEEQITIQNFeLLKR 459 Staphylococcus aure...
15614284 347 Ip--IPKRALFRFLIR---TVSLPVIVTALLFTFTDYgW--IGIVLILLAVWLGYSQYKVAGYFYREDTLVFRYR-QLSQ 418 Bacillus halodurans
16077527 356 r---LPRRALKRYLFR--SVIFSLFLIIPLCIFFQPWgY--LSVILLPIELLFGYLAYKEAAWTINGDRLQLTSR-FIGR 427 Bacillus subtilis
19551872 345 a---DPSHMSRPQYTP--------PVAARLLTP-----------------VDRTRQGVTLIGVAGAPGAVVVHEG-RFMP 395 Corynebacterium glu...
15840670 341 GpaaARRRWTRALLVPTLAGVALIAAAPILGVPGWAW-T--LWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAG-SLQR 416 Mycobacterium tuber...
15608366 341 GpaaARRRWTRALLVPTLAGVALIAAAPILGVPGWAW-T--LWAVLTAGCAGLAVDRVRSLGHRVADGWLVARAG-SLQR 416 Mycobacterium tuber...
15790382 357 pe-rAQDRYVRRYALAGLGVVAAGALVSRLVVS-FPW-Y--ALAVLVPLAVPAARRAHATRGVYSDSDHVVTQAG-WWRR 430 Halobacterium sp. N...
16799955 355 e--rAPKASLRRFLQIYLIWTVIPAIIASILFFPLG--L--ISIILPILAGIKAIASYRATGVFMDKHTLLVQSRpIFSK 428 Listeria innocua
15927648 460 NIYYFKAHHIIGFDTWQHTLLKRNNLNNFSFIVAKGVG--AQSINLKYARSEDANKLKSWYLRGENDEGL 527 Staphylococcus aureus subsp. ...
15614284 419 VHVIVPKRKIQMFEVATSVFQQRLRLCSPLVSVQSSIVg--KTFSVRDLDRKDGNRLLAWFSIEQPSVSF 486 Bacillus halodurans
16077527 428 TTAIVLKKRMQVCKFSQSYFQKKGRLYTISTSVKSSSh--MEELTVRDVGEEDAAFILKWYSYEKADG-- 493 Bacillus subtilis
19551872 396 RMSVIDTSHIQELTLKHGPIQRILGLSTVVFNLVQGP----VGMAASDLSAADGKELLNILRNRKLPALE 461 Corynebacterium glutamicum AT...
15840670 417 RRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGR----KGYQVLDVPAELAWSVAGAASPWVADSVW 482 Mycobacterium tuberculosis CD...
15608366 417 RRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGR----KGYQVLDVPAELAWSVAGAASPWVADSVW 482 Mycobacterium tuberculosis H37Rv
15790382 431 KTTVVPAHRVQTVLRKQTVFQRRWALTSVVIDTAGSRSlsGGGAVAIDRDGGDADALADDVVDCTLLSVG 500 Halobacterium sp. NRC-1
16799955 429 LTHIIRKERIQGLSLRQSIWMEKGDSRHLNVWLKSGSt--SAEAYVRYLNQDQAISVYNWYSPSKTIN-- 494 Listeria innocua
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