Conserved Protein Domain Family
YncB

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COG1525: YncB 
Endonuclease YncB, thermonuclease family [Replication, recombination and repair]
Statistics
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PSSM-Id: 441134
Aligned: 829 rows
Threshold Bit Score: 47.3651
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015154116   1 MAspfyltik---------------------------------------------------------------------- 10 
WP_003548854   1 MRiwkrgprvaflknregnsllanrkfr-------------------------------------------htgwmtvii 37 
WP_011982844   1 ------------------------------------------------mkhlilaasialastsafaadvikrtpaaslp 32 
WP_013653763   2 YRsvsrrlgrtatrvylvlfvvvaagnavsfafhdrlksdlgavsrhvaalwsrepapepaarlkpryeappqrltappl 81 
WP_055047832   4 LRcfaatimlai-------------------------------------------------------------------- 15 
WP_099516282   3 MRyagfclalmvfvtnaa-------------------------------------------------------------- 20 
WP_117411625  26 aiaplrdrlgrratrvyaglivlviafnvgsylygeqilreakqvrmraavpvaapqehdpaasgplaravppgalappr 105
WP_126539671   1 MRrraaavltaigc------------------------------------------------------------------ 14 
WP_109758651   1 MKavsvvvfial-------------------------------------------------------------------- 12 
WP_108881531   9 LQvavnslvallcwatml-------------------------------------------------------------- 26 
WP_015154116  11 ---------gkfviadkEPDGDSVrfiaddsdlyqelqrnyrikpsrdrsvQLRFEGIDAPEVHygR------------- 68 
WP_003548854  38 tftigvfprestaetvrVIDGDTIlld----------------------qiTVRLEGIDAPEAG--Qkcas--------- 84 
WP_011982844  33 vhpsqpvtlpifkgrvaVMDGRTLwfpt--------------------yaqRVRLADIDACELP--Qwaldpkwtnrevt 90 
WP_013653763  82 ppfarfepqlaleppyaVTAADAFtag----------------------dvRIRLAFIDGLAAA--Dlcln--------- 128
WP_055047832  16 --------gpafasdilVIDGDTIelg----------------------gtRYGIHGIDAPEPG--Qqcer--------- 54 
WP_099516282  21 --isgyangnsisgyasVLDGDTAdig----------------------gkRVRFFGIDAPELS--Qtcvd--------- 65 
WP_117411625 106 ppysivgrelsfqppyvVTGSDTFlnr----------------------qvPVRLAFVNGIAPD--Dicmd--------- 152
WP_126539671  15 -----lmspaagaaavrVIDGDTIevd----------------------gvVHRIWGVDAPEAG--Qkcrr--------- 56 
WP_109758651  13 --------cgpalseprVVDGDTLeid----------------------gtIYRLNGIDAPEHG--Qly----------- 49 
WP_108881531  27 -paqaqtetetlrgsaiAVDGRIVsmd----------------------gkELILADIIVPEPG--Akcl---------- 71 
WP_015154116  69 ---YAQPLGDETRDFLLKKM--GfAKIKFqgdrvQSAdpdtisgviltqAADV-----NGRPISYA-LIgknaaqleNGd 137
WP_003548854  85 fsgGDWPCGKVAIAALEALVa-S-GDVVC-----DDR------------GVDI-----YQRQLGVC-RV--------GE- 130
WP_011982844  91 kapPPVPCGPFAKAWLKRTIg-S-SAVTC-----AVV------------GYDA-----EAMPRARC-TS--------RG- 136
WP_013653763 129 vglTRFPCGLMGRASMQNLVs-N-APLTC-----RPV------------FYDEgdlrhA------C-TL--------QG- 173
WP_055047832  55 tggKSWNCGAAAVVALEEIVfpA-TDVHC-----DAG------------ELDD-----YGRTIAVC-WA--------DG- 101
WP_099516282  66 aagRSWQCGREARDRLAELTd-G-KVVTC-----TYE------------EIDA-----NGRLLGSC-KV--------DG- 111
WP_117411625 153 rflAKYPCGLMARAALKQAIs-G-QDLRC-----RAI------------FYGRediryQ------C-FA--------GE- 197
WP_126539671  57 asgSEWACGKAAIKAMDGLVl-G-HEVTC-----DDR------------GPDA-----YGRTLSVC-MA--------DG- 102
WP_109758651  50 ---gSWACGSDATAELVEIVk-E-HDITC-----DAL------------GQDG-----FDRTIATC-YA--------DG- 92 
WP_108881531  72 lrgKLRDCGKFARLGLTELVv-A-ATIEC-----RKT------------KQPT----------YNCrTE--------DG- 113
WP_015154116 138 wtqvepellrQTLNFLMMAEGRAYytV--Y--TStprshrqVLREaALAAREKDLGVWAADs--------TS 197
WP_003548854 131 ----------REINAEMVASGSAWa-FrkY--ST-------DYVAlEDKARGEHLGIWQAFtipawdyraER 182
WP_011982844 137 ----------HDLALEMLRVGWARv-DspYltHP-------QYMGyQRAAMSARYGMWATYvldmnewrrKA 190
WP_013653763 174 ----------TDIAAHQVAAGFARpd-hlG--RL-------HLDRlAEAAAASRRGAWNGNwavlsedamRR 225
WP_055047832 102 ----------MDIGKHLVRSGLAWa-FvkF--AT-------DYVEdEAMARAARIGIWQVEsetpwdfraRR 153
WP_099516282 112 ----------RGINGILVAEGLAWa-FvrY--SD-------VYVGvERKARAEHKGVFAADnlpawdyrsER 163
WP_117411625 198 ----------ADIAAGQVRAGFAKpd-slG--RA-------RLSGaMEEARRLQSGAWNGGwrtmgrsafQR 249
WP_126539671 103 ----------LDVGRAMVTAGLAWa-FrkY--AH-------DYDAaEDEAHGRGVGIWQAEtetaweyrqHR 154
WP_109758651  93 ----------TDIGASMIDKGMAWa-FvrY--SD-------AYVDvETAARERRRGVFSGDytapwdyrsLR 144
WP_108881531 114 ----------YDLALGQIHAGWAVp-TksA--PA-------HYFTkMNEAKTKKRMLWSALhadg-kpgyAS 164
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