Conserved Protein Domain Family
TIGR00766
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TIGR00766: TIGR00766 
inner membrane protein YhjD
This family, including YhjD in E. coli, is a conserved inner membrane protein homologous YihY, which in turn was incorrectly assigned to be ribonuclease BN. This, any suggestion this family is similar to ribonucleases should be removed. [Transcription, Degradation of RNA]
Links
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Statistics
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PSSM-Id: 188082
Aligned: 3 rows
Threshold Bit Score: 324.547
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P45417        42 AHFIRAGDRFNDRMGNQFGAAITYFSFLSLIPILMVSFA----T--AGFVLASnpDLLTGLINRIVNSIsdPSLARTLKN 115 Dickeya dadanti...
P37642        52 AHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAaggfV--LASHPML--LQDIFDKILQNISD--PTLAATLKN 125 Escherichia col...
WP_003417435  21 DHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFG----VggFAL-SRR--PELLTTLEERIRTSvsGAVGQQLVD 93  Mycobacterium t...

P45417       116 TVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAI----HaqsrDVWERQPHEEEKIYLRYLWDFLSLIGLLLALVITLF 191 Dickeya dadanti...
P37642       126 TINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIraqsR----DVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLS 201 Escherichia col...
WP_003417435  94 LMNSAIDARASVGVIGLATAAWVGLGWMWHLREAL----S----QMWAHPVAPAGYLRTKLSDLAAMVG-TFVVIVATIA 164 Mycobacterium t...

P45417       192 LTSVAG---SAQATIVRALGLngidwlrPVM------TLIALSISIFANYLLFLWILWVLP----RHNPRRG-PLLRGTL 257 Dickeya dadanti...
P37642       202 ITSVAG---SAQQMIISALHL-------NSIewlkptWRLIGLAISIFANYLLFFWIFWRL----PRHRPRKkALIRGTF 267 Escherichia col...
WP_003417435 165 LTVLGHarpMAAVLRWLEIPQ-------FSV------FDEIFRGISVLVSVLVSWVLFTWMigrlPREPVGLvTAARAGL 231 Mycobacterium t...

P45417       258 MAAIGFEALKFAMTVALPELATSPSGAAFGSVIGLMTFFYFFARLTLFCAAWIATADPK 316 Dickeya dadantii 3937
P37642       268 LAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYK 326 Escherichia coli K-12
WP_003417435 232 MAAVGFELFKQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA- 289 Mycobacterium tuberculosis complex
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