Conserved Protein Domain Family
RarD

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COG2962: RarD (this model, PSSM-Id:225510 is obsolete and has been replaced by 442202)
Uncharacterized membrane protein RarD, contains two EamA domains [Function unknown]
Statistics
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PSSM-Id: 225510
Aligned: 24 rows
Threshold Bit Score: 208.633
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15888411  54 PAqegGDSARGFAFALSAYLLWGFLPFYMKAVAHISPI--EVIVHRVIWSVPIAAVVLIAL--GRTAEIRT-----ALRN 124 Agrobacterium tumef...
17987552  16 DTr-lSDGSRGFLMALGAYGLWGALPFYLKALSHVPAM--EVVSHRVIWSVPVALVLLILL--GQFRGILS-----AVRQ 85  Brucella melitensis
16124509   2 PPhsqTESRSAYAAGVGCYLLWGFLPLYFHLLAKLGVTswEMIAHRSLWSVLWALGLVLIA--RQVGQVAQ-----VLRQ 74  Caulobacter crescen...
19551383   1 MAt-nRTSSAGVITSVLASALFGAIFFISGAIEAKAET--LVAWRVLLTAACYLLALLHPAgrKVFKEFWDt----LRSQ 73  Corynebacterium glu...
3915923    1 MKfkmKVVTQGILLCIFSQCLFGILYLFSIWLQPLSGT--DVFAWRMLTMIFGLLLILFPT--IGCRSLLSlitttLGKS 76  Haemophilus influenzae
2833492    1 -------MFKGILVSLLASFLFGYMYYFSTLLKPLSGT--DIFGYRMIFTFPFVLLSVTLF--KQKAALIErl-krIQKR 68  Haemophilus influenzae
15603146   1 -------MIKGILLSLSASVLFGYLYYFSTLLQPLGGE--DIFGFRIIFTLPFVIAAVFLF--KQKQAVGQyf-vrIKQQ 68  Pasteurella multocida
15964870   9 PAe-nVDSPKGFAFALAAYLLWGFLPFFMKAVSHIPAA--EVVAHRIVWSVPLAGLVLVWL--GRTQDVKV-----ALRS 78  Sinorhizobium meliloti
16766290   1 ------------MFVVLAFILWGLTPLYYQYLSGGNLA--QILIYRVFWSIPLLLAVRLLF--RQRTRFHD-----AWKD 59  Salmonella typhimur...
13476476   9 DAe--SKGRRGFLLALGAYLLWGLLPFYMKAVAHLPLA--EVIAHRIVWSVPIAAAVLVWA--GRTADFKA-----AIRS 77  Mesorhizobium loti
15888411 125 PKMLAMASLTAALISINWGVYIWSIGAGRALDAALGYFINPLFSIFLGAVLLKEKLYPAQIAAICLVGLAVAILTWHAGS 204 Agrobacterium tumef...
17987552  86 PRMLAMAALTAALVTMNWSVYVWAVAHDQVMGAALGYYINPLFNVVLGRLFLGERLTKTQYVAVGLAFVAVVLLTINAGG 165 Brucella melitensis
16124509  75 PKTLGVLALTTLAIFSNWTIYVFAVNAGHVIEASLGYYINPLMNMAAGALLFRERMSTEGKVAIGLAAVGVAIQTVALGH 154 Caulobacter crescen...
19551383  74 PRQILYFIFLVVLITLQLWLFSWSPKS-HALDASLGYLLLPIFLVIVGRFFFADYITRLQWIAVGIALIAVTLKFVISAQ 152 Corynebacterium glu...
3915923   77 WTRWVLFLLGTLDAGSQFWLFMWAPLNGEGINIAMGYFLFPLIMAVLGWAWLKERLSFIQKIALLLAAAGVAHELWHTQS 156 Haemophilus influenzae
2833492   69 PHLALSYLLCGLLMGFQMWLFLWAPNNGSSLSVSFGYLLLPIVMVAAGRVFFKERISTFKFIAVIIATLGVISNIVLKGG 148 Haemophilus influenzae
15603146  69 PLLIFGFLFNSAMMGIQIWLFLWAPNNGSALSVSFGYLLLPLTMVLVGRLVFKEHISRVKFLAVVIAAIGVFSNILLKGG 148 Pasteurella multocida
15964870  79 PRVLMMATVTAALITINWGIYVWAIGAGRAIETALGYYINPLFSIFLGALLLKERPNPAQMVAIGLAALAVGVLAFDAGG 158 Sinorhizobium meliloti
16766290  60 KKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKLSLFQAIAVFSGVCGLTFQIIMLRH 139 Salmonella typhimur...
13476476  78 PRTIAMAALTAALISVNWGIYVWAIAVDRTVETALGYYINPLVSVVVGALLLGERLDRLQIAAVVLATVAVTVLTIEGGK 157 Mesorhizobium loti
15888411 205 LPWVSIALTVSWGFYAFFRKTLPIGATQGFLLEVMLLSIPAVLVMIWLAFSGQahFMG-GNSADTWLLAASGVITAVPLI 283 Agrobacterium tumef...
17987552 166 LPWVSLALPISFGLYGFFRKSLPMPPLQGFTLEVLILCIPALAYVAWLAATEQdhFVA-GPVSNITLLLLAGPFTAIPLI 244 Brucella melitensis
16124509 155 LPIVSLGLALTFCVYAILRKQVKADAQTGLFIECAYLALPGLAYVWFLQSSGQghFGD--GASVTTLLALAGPATVVPLA 232 Caulobacter crescen...
19551383 153 LSWVTFAIAAGYALYFALRKYSGLNNAFAYGAEVLALSPLAFFMLATVEDPL--------SNAMLSMVILAGLAGALAMA 224 Corynebacterium glu...
3915923  157 FSWTSLWVCTVYPFYYLSRKWMKIPALQGITLDIILISIPCFIYILSQSDTLS---LVtQEYRYWLLLPALGIVSAISLS 233 Haemophilus influenzae
2833492  149 LSWEAIVICLGYTAYFSIRKALKNTDLASFCLEMLSLMPVSIYFALQTDFAT----VQqTNPFIWGXLVLLGLISGTALI 224 Haemophilus influenzae
15603146 149 LSWEALLVSFGYSTYFATRKILKINDLAGFCLEMSLLLPVCIYFAWQVDLQA----VQqANENILLLLVLLGLISGVALN 224 Pasteurella multocida
15964870 159 LPWVSIGLCFSWGFYAFFRKTLPVGPNQGFFLEVLLLSIPAAGYVIWLEATGQghFLGdSNMTDVLLLLACGIVTAVPLM 238 Sinorhizobium meliloti
16766290 140 FPALALTMGLSFALYGLARKFIHYDVMTSITIETLWALPVSLLIFLFSDTGP-----IiSANTPFFLYVMTAPVTIIPLV 214 Salmonella typhimur...
13476476 158 LPWVSLALAFSFAAYGFFRKTLPIGPSQGFLLEVLLLSVPALGCIVYLIATGQdhIVS-STGTDTALLIGCGPVTSVPLL 236 Mesorhizobium loti
15888411 284 LYGNGAKLLRLSTIGIMQYIAPTMIFLIAIFIFKEPFDMVRMAAFAMIWVALAIYTGSSL--MRLKR 348 Agrobacterium tumefaciens str. C...
17987552 245 LYVGGAKLLRYATLGLMQYMTPTMLFFFAIFIFHEPFSTAQLAAFVLIWAGLALYTWSSLsqHGRNR 311 Brucella melitensis
16124509 233 LFAWSARRLPLSAVGFLQFIAPTIQFLLGVAFG-EPFTPLRALSFVFIWLGVATFAYGAWrkAKALS 298 Caulobacter crescentus CB15
19551383 225 LYLAASTLLSMPMFGLLSYGEPILLFVAALLLG-ETLNLSDAIVYSLLACALALLGFDGIrrSRKNL 290 Corynebacterium glutamicum ATCC ...
3915923  234 ANLKSSQQIPVSIFAVLSYIEPILLFLIAVFVLDNQITTSDYFTYVPIWLSLIVIGIEGLlnKKKVR 300 Haemophilus influenzae
2833492  225 AYVIASNMLPMNLLGLLGYVETIMMLCVSFLIG-EQIDSESYPLFICLVIAMILVMVDGVykHTQKE 290 Haemophilus influenzae
15603146 225 TYIVASSLLPINVLGLLGYAEPIMMLFVSFLIG-EQLDSETIPLFICLMISMILFMSEGLv--rLKR 288 Pasteurella multocida
15964870 239 IYANGAKLLRLSTIGIMQYIAPTMIFLIAVFVFHEPFGTAKLVAFALIWAALFIYSGAMLaeSRARR 305 Sinorhizobium meliloti
16766290 215 LFAIALNHTSLIVTGLAQYIEPSLQFLLAIMIFGEHINYAELLCFCAVWFGLFLCISENLysHYLRA 281 Salmonella typhimurium LT2
13476476 237 LFAFGAKLLRLSTIGIMQYIAPTMVFLIAVLIFDEPFGTAQAIAFVLIWTALAMYSWSMLvtARRAA 303 Mesorhizobium loti
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