Conserved Protein Domain Family
LPD11

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pfam18824: LPD11 (this model, PSSM-Id:408594 is obsolete and has been replaced by 436766)
Large polyvalent protein-associated domain 11
This is an alpha-helical domain with conserved hydrophobic residues. It is found in polyvalent proteins of conjugative elements.
Statistics
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PSSM-Id: 408594
Aligned: 29 rows
Threshold Bit Score: 74.2018
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_004339696  78 CRGGYMMLSKIYNDLTAYFGktgdeeldkqdFRYHNDKyGLWGDTIAETIDELKRRWNEITEDLKPEWCSWEDIVKLERK 157 Prevotella bivia
WP_066538433  75 KSFQYMMLDRLRCDCDFYLG-----------YGNRNTR-NLWWGSPQAHIENMKKRWLEFADNEKPQWLTWGQILEYERQ 142 Acutalibacter m...
Q76YT6        15 HEFKYMLLSRMKSDCEFFLG-----------YGNRSVS-RLWAGSVDEQIESMKALYNSFET--KPEWITMQMIEKYATE 80  Aeromonas virus...
YP_003969569  15 AEFKYMLLSRMKSDCEYFLG-----------FGNRSTR-ALWAGNVAEQIEGMKALWNSFDT--KPEWLTMEQIEEYETK 80  Aeromonas phage...
CDF07952      14 DIFKYQLLSRLQGDCEYYLG-----------NGNRNKK-QLWAEDEREQIEVMKLLYNSFGDENKPEWLSMTDIENYEKQ 81  Firmicutes bact...
CCZ70305      11 SRFRYMLLGRMQSDCEFYLG-----------YGNRNTS-RLWAGSEERQIEYMKQLYNSFDEGEKPQWISMAQIEEYARQ 78  Bacteroides sp....
WP_004323443  11 LKFRYMLLGRLQADCEYYLG-----------FGNKSSR-RLWAGSEKTQIEYMTKIHDSFRENEKPEWLTMEQIKEYSNA 78  Bacteroidales
EFV29414      22 SVFRYQLLGRLQSDCEYYLN-----------YGNRHPK-SLWAGDEKLQIEFMIKLHDSFKEDEKPEWLTMDKILEYSKR 89  Bacteroides egg...
WP_008781644  23 ARFRYMLLARMQSDCEYYLD-----------YGGRDPK-RLWAGDEERQIDLMIKLHDSFKEGEKPQWLTMDKILEYKKE 90  Bacteroidales
OUP11413      11 KKFRYMLLSRMQSDCEYYLN-----------YGNRNPK-RLWAGDEQRQIEYMLLLYDSFKEDEKPQWLTMDEILDYQMR 78  Mediterranea sp...
WP_004339696 158 A 158 Prevotella bivia
WP_066538433 143 M 143 Acutalibacter muris
Q76YT6        81 M 81  Aeromonas virus Aeh1
YP_003969569  81 M 81  Aeromonas phage phiAS5
CDF07952      82 M 82  Firmicutes bacterium CAG:95
CCZ70305      79 M 79  Bacteroides sp. CAG:702
WP_004323443  79 M 79  Bacteroidales
EFV29414      90 M 90  Bacteroides eggerthii 1_2_48FAA
WP_008781644  91 M 91  Bacteroidales
OUP11413      79 M 79  Mediterranea sp. An20
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