6RKO,5DOQ


Conserved Protein Domain Family
AppC

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COG1271: AppC 
Cytochrome bd-type quinol oxidase, subunit 1 [Energy production and conversion]
Statistics
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PSSM-Id: 440882
Aligned: 696 rows
Threshold Bit Score: 232.668
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6RKO_A         2 L--D-------------IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALG 66 
WP_004044460   2 L--D-------------PVIASRLQFALTTIVHIIFPVMSMGLAPFLIYFTWKDIRTDDPVYEQLRRFWTKIFAVSFVVG 66 
WP_008413706   2 L--D-------------PVLASRIQFALTVIVHIIFPVVSMGLAPFLIYFTWKDIRSDKVIYEQLRRFWTRIFAVSFATG 66 
WP_005580163   2 L--D-------------PILAGRLQFGVATTIHIVFASLSIGLGPFLVYFVIQEIRTGTERYARLRRFFTKVFALGFVMG 66 
WP_005580953  44 L--S-------------PELASRIQFGWAITIHIIFAALSVGLAPFLVYFTVQEVRTGKRRYARLRKFWTKIFAVGFIMG 108
WP_049954099   2 I--D-------------PVLASRLQFAIAITIHILFAALSIGLAPYLVYFTVQEVRTGQERYRKLREFWTKIFAVGFVMG 66 
WP_050048664   2 V--D-------------PVLASRLQFAWTTAIHIIFPTITMGLAPFLVYWTWKEVRGDGEVYARLRRFWTKIFALTFVTG 66 
WP_119821904   9 LvaDltaiaaptvlsggPELLSRIQFAWTITIHIVFASLSVGLAPLIVYFTYRDVKTGSERYAQLRDFWVKVFALGFVMG 88 
WP_108381827   2 I--D-------------PVLASRLQFALTTAVHILFPAISMGLAPFLVYFTWKSIRSDDPIYTRHQRFWTKIFAITFVCG 66 
WP_121919184   2 V--D-------------PVIASRLQFALTTIVHIVFPVVSMGLAPFLVYFTWKDIRTGQPVYEQLRRFWTRIFAVSFVVG 66 
6RKO_A        67 VATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFgWDRLGKVQHMCVTWLVALGSNLSALWILV 146
WP_004044460  67 TVTGIVLEFEFGTNFAAFSTAAGELFGGPLATEGMMAFMLEATFLGVFVFgREKVSDALYMVSAVAVGLGTWLSAVWILV 146
WP_008413706  67 TVTGLVLEFEFGTNFAAFSKTAGELFGGPLALEGMMAFMLEATFLGIFVFgRERVSDRLYFLSSIAVGLGTWLSAVWILI 146
WP_005580163  67 TVTGIPLGFLFGTNFAEFSTMAGEVIGGPLSFEVQMAFFLEAVFLGVLLFgRDRVADWFYALSAVLVALGAWISAFWILV 146
WP_005580953 109 TVTGIPMGFMFGTNFGAFSTTAGELIGGPLSFEAKMAFFLEAVFLGVLLFgRERVSDRFYALSSVMVALGAWLSAFWILV 188
WP_049954099  67 TVTGIPMGFMFGTNFSAFSTVAGELIGGPLSFEAKMAFFLEAIFLGILLFgRDRVSGWMYALSSFFVALGAWLSAFWILV 146
WP_050048664  67 TVTGIVLEFEFGTNFASYATQVGGIFGGPLATEGLMAFFLESTMLGIFLFgRERVSDRAFLGSAFLVALGSWLSAVWILI 146
WP_119821904  89 TATGIPMSFQFGTNFPIFAEFAGELIGGPLAFEAKMAFFLEAVFLGVLLFgRERVSDRMYLASSVLVAIGAWLSAFWIIV 168
WP_108381827  67 TVTGIVLEFEFGTNFATFSTAVGELFGGPLATEGMMAFFLESTFLGVFVFgRERVSDRLYMLSAVLVALGSWLSAVWILI 146
WP_121919184  67 TVTGIVLEFEFGTNFAAFATTAGPLFGGPLAVEGMMAFMLEATFLGVFVFgRERVGDALYMVSAVAVGLGTWLSAVWILI 146
6RKO_A       147 ANGWMQNPIAsdFNFE--TM--RMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR--------DFA 214
WP_004044460 147 ANSWMQTPRG--YELAreSGqlVVSLVDPIAAYANPRFPWMFVHMQNAAVLSVALFMAGVAAYHVWQRGisadddreDAR 224
WP_008413706 147 ANSWMQTPRG--FEVVmeDGqpIVHLVDPIAAYLNPRFPWMFVHMQNAAVESVALLMAGIGAYYVFRHHiwgy-pidNIE 223
WP_005580163 147 VNSWMQTPRG--FELVerGGteVVQLTDPLAAFFNPRFPWMFVHMQTAALLSVALLVAGIAAYFVWRNR--------GGA 216
WP_005580953 189 VNSWMQTPRG--HEVVmeDGipIAQLTDPLAAFFNPRFPWMYVHMQNAAVISVTLLIVGLAAYFVWKNR--------DSK 258
WP_049954099 147 VNSWMQTPRG--YETAtsNGteIVQMTDPLAAFFNPRFPWMFVHMQNAAIISVTLIIAGVAAYFLWHNR--------DSE 216
WP_050048664 147 ANAWMQTPAG--FKMSerAGeqVAVLTDPVAAYLTPRFFYMFTHMQTAAVLSAALFIAGIASYKLLTTDd-------RSA 217
WP_119821904 169 VNAWMQTPQG--FDLA---Gd-VATMTDPIAAIVTPRLAWMYVHMQLSAVIAVALLVAGVGAYLLWKHD--------GND 234
WP_108381827 147 ANSWMQTPRG--YEMVeeGGmeVVHLTDPIAAYANPRFVWMFVHMQTAAVISVALLLAGLAAYHVLRDR--------DPE 216
WP_121919184 147 ANSWMQTPRG--YEMVtqNGqqVVHLVDPVAAYLNPRFFWMFVHMQNAAVESVSLAMAGVAAYFVFRHHvwdr-pvdHVS 223
6RKO_A       215 FAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPaPAaFTLFGIPDQEE------ETNKFAIQI 288
WP_004044460 225 FWRKTLKIALVVLLVTAPFQAIHGDAYGRHVYETQPQKFAAMEAVWETDS-YVpEYIFAIPTSLDgitdprAKELFGIGI 303
WP_008413706 224 FWEATLKIALVVLVITAPLQAIHGDLYARHVVETQPQKFAAMEAIWETDS-YVpEYIVAFPTSIQdlldprAKEIFGLGI 302
WP_005580163 217 AWRPTLKLAVGVVFVTSIFQVLHGDFYGRHVFETQPHKFAAMEAVFETTR-GAdLHIFAIPTSLEsftdprAENLFTISI 295
WP_005580953 259 VWKTALRAGLVVLLLTSAFQAIHGDMYGRHVAETQPHKFAAMEAHYETGQ--AdLHLIALPTELEsltdprADNLYTISI 336
WP_049954099 217 VWQTALRVAVVVLILTSIFQVVHGDAYGQHVAETQPQKFAAMEAHYETER-GAdLHIIAVPTTLEgftdpqADNLYKISI 295
WP_050048664 218 FWMKTMKVALVAMIITAPLLAVHGDAYGRHIHDTQESKMAAIEATWETGG-YApLYLVAAPTSTDnvvapaEEDLFTVGI 296
WP_119821904 235 AWRTAVTIALVLLVISAPVQALQGDAYAKHVEDTQPAKFAAMEAHYETDE-GVaLHVIAFPKTLEgftdprAENLYTLSV 313
WP_108381827 217 FWTLALKVGVVALLITAPLQAIQGDAYARHVHETQPQKFAAMEAIYETDS-GVvEALVAVPTDLEgftdprTTDLFIIGI 295
WP_121919184 224 FWETTLKIALVGLLITAPLQVIHGDMYARHVYETQPQKFAAMEAVWETDS-YVpEYLIAFPTSVQdvldprAKDIFGIGI 302
6RKO_A       289 PYALGIIA-TRSVDTPVIGLKELmvqheerirngmkayslleqlrsgstdqavrdqfnsmkkdlgyglllkrYTPNVAda 367
WP_004044460 304 PGGASWLAsGGDPQAEITGLNEFd-----------------------------------------------tEAPPVA-- 334
WP_008413706 303 PGGASWLAsGGDPQATIQGLNEFe-----------------------------------------------gPQPPVA-- 333
WP_005580163 296 PYLASFLAsGGDLATEVTGLNDFp-----------------------------------------------yEAPPVA-- 326
WP_005580953 337 PHLASFLAsGGDPTAEVTGLNDFe-----------------------------------------------yESPPVA-- 367
WP_049954099 296 PHLASFLAsGGDPGAEVTGLNDIe-----------------------------------------------yESPPVA-- 326
WP_050048664 297 PWGASMLAgAGDPSTVITGFEDIe-----------------------------------------------hDLPPYL-- 327
WP_119821904 314 PMLVSYML-EGDPGAEVIGLNEFe------------------------------------------------hTPPVA-- 342
WP_108381827 296 PGGASFLAsGGDPTAEIQGLNEFe------------------------------------------------gMPPVA-- 325
WP_121919184 303 PGGASWLAsGGDPQATIRGLEEFe-----------------------------------------------gPQPPVA-- 333
6RKO_A       368 teaqiqqatkdsiprvaPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYG 447
WP_004044460 335 -----------------IVFWSFRLMVAAGFWFILLAFWAGYRWWADELYEDDLLHKAFVGSSLLGIFAVEVGWIVTEVG 397
WP_008413706 334 -----------------IVFWSFRIMVALGFWFILLAFWGVYRWWRSELYEDDLLHKALMLSAPLGLLAVELGWIVTEVG 396
WP_005580163 327 -----------------FVFWSFRFMVGLGIWFVVLGVWGAYRSYRGELFDADRYLQALVMSGPLGFVALILGWYVAEIG 389
WP_005580953 368 -----------------WVFWSFRIMVGLGFWFIALGAWGTYRAWRGGLADDDRLLKALMLSSPLGFVALITGWYVAEIG 430
WP_049954099 327 -----------------VVFWSFRIMVGLGFWFVGLGVWGAYNRLRGKLSESSRYLLATMLSAPLGFVALVTGWYVTEIG 389
WP_050048664 328 -----------------LVFYSFRAMVGLGFWFIFLALWGVYRWRQGSLLDDTLLQKAMVASTGLGVLAVEFGWMVAEIG 390
WP_119821904 343 -----------------IVFWSFRAMVGLGVWFVFLGLWGAYRRYQGRLSESDRLLKALMLSTPLGFLAMIAGWYTTEVG 405
WP_108381827 326 -----------------YVFWSFRLMIALGFWFIALGLWAGYRWSQGRLTTDRRLLYALVLSAGGGLFATELGWIVTEVG 388
WP_121919184 334 -----------------IVFWSFRMMVALGFWFVTLAFWGGYRWFRGELFEDDLLHKALMGSAPLGVFAVELGWVVTEVG 396
6RKO_A       448 RQPWAI---GEVLPTAVANSS-LTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSL 504
WP_004044460 398 RQPWVI---QGVLRTSEGVSPgLTSFEATLTLVGFAVVYTGLLALYTYVIRRIIREGPPSV 455
WP_008413706 397 RQPWVI---QGVMKTSDSVSPgLTGAEATATLVGFAIVYLGLLTLYTYVVVRIIRAGPPDG 454
WP_005580163 390 RQPWLI---QDVLTTSAGSSAgLSGTEATLSLVGVTVAYVGMMVVFCLLVRRYVRSELGEE 447
WP_005580953 431 RQPWII---QDVLTTAEGVSPpLSGTEATLTLVAFVIGYILLFGVFLYVFGRIVDEEAQRH 488
WP_049954099 390 RQPWII---QGVLRTSDGVSPaLTGAEAIISLVGTAGGYLVLLALFLYIGRRIVGEERADL 447
WP_050048664 391 RQPWAI---YGELLVSDSVSPgLTGGEAMLTLIGFVGGYLLLFGTWSYLVYRLVRSGPAAP 448
WP_119821904 406 RQPWMV---QDELLVGESVSPvLTGWEAMLSVAAFVAVFGGLFLIALYAFRRMVAAESRRL 463
WP_108381827 389 RQPWLFdgpSGSLRTAEGVTTsLTGGEATLTLAGFVLGYSALLVVYVTVVRWMIRNGPPSA 449
WP_121919184 397 RQPWII---QGEMKTMQGVSPgLTGAEATATLAGFAVVYLGLLVLYGYVVTRIVRAGPPTG 454
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