Conserved Protein Domain Family
COG4228

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COG4228: COG4228 
Mu-like prophage DNA circulation protein [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 443372
Aligned: 44 rows
Threshold Bit Score: 194.893
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_237659      1 MSTWRDSLLPASFRGVGFFIEKAVVPAGRKGQLHEFPQRDEPYFESLGKQSKVHTLTGFIV---GPDCFEQRDKLLQALE 77 
NP_274140      1 MSGWHTLLQDASYKGVGFDIEVVDESNGKALAEHARPFVQGIDLEDMGMTGRQVQINAVFW---GKGYAGRLKKLLDALE 77 
WP_011416471   1 M---AAELNVGVLAGIPLEMEMLDDSFACAIARYAYPFADGADLEDMGQRARMVRVRAYFYdnaEKDTYDDHIALISLLS 77 
WP_012341508   1 MKGWTMPIQRASYRGVRFEVISVDDELNRATIDHAYPFVNGADIEDLGLNPLTVRMQAVFY---GEGYYTDFKQFLSALQ 77 
WP_013028381   1 M-AWEDKLLDASFRGIKFEVVKTDDDAPRSIVEHAYPYVNGSDVEDMGRGARRISLEAVFY---GDDYETRLQEFLDAMD 76 
YP_011934      1 M-SWKDDLLDASFRGARFEVVRTRDHGERALVEHEYPYRTGAEIEDMGRKARRISITAVFY---GPHYAAGLAALLEALE 76 
WP_006248664   1 MSGWTMPIQQASFKGVRFDVLAVDDSFERAVVEHAYPFVNGADLEDMGLNTQTIRLQAVFF---GSSYYTDYIRLLSVLQ 77 
WP_038637856   1 M-SWEDSLQDASFRGVRFDVVNTRDSASRDIATYEYPYVDGGDVDDLGRKPRNLRMTVLFW---GDDYDVRLQAFLAALD 76 
WP_061552899   1 M-SWSENMQDASFRSVRFDVINTRDSVERALAQHEYPYLDGADIEDMGAQPRSLQLTAMLW---GDDYESRLQTLLQALD 76 
WP_087446338   1 M-AWKDTLLEASFRGVVFDCISTDDSADRATAEHSYPYVDGADIEDLGRGPRHFSVAAIFF---GDDYEVRLQAFLAAFD 76 
YP_237659     78 QEGAGELVHPWLGRV-QVQVGECGVTHNLSEGGLVRLDLKFYPANp-----lKFPVSTLNTR-----RQLLGASESLLDS 146
NP_274140     78 QPGGGVLVHPVWGRMhNMIAASWSYRHEADYVDYAGIDITFREAAeaq-eifVFENAFLVEL-----EALIANIDTYREA 151
WP_011416471  78 DRKLVDFEHPKYGLM-KGKIEELNVRHDDRQ-RCAEVDIAFVEQMrgtieplTRPAVLSTVE-----EAYIAGQEEQIAV 150
WP_012341508  78 KQGADVLVHPIRGRLpNMLCTSANFRHDAEMIDYVALDLTFVESTpak-pifVFEFSFLAKI-----DELLTQLEDFIDE 151
WP_013028381  77 QPGAGEFIHPVFGSIkNAQPVRYPVHHDAENPDYATVAIEFIESTpg---gsFFEKALPAQKa----EAITQQGAAATVS 149
YP_011934     77 KPGKGELIHPVFGSV-TVCAGPYDVTHDAEQPDHAEVTLEFVEAEpd---npFLAAGGRRATaqdagLRVEDATARGKES 152
WP_006248664  78 QKGADVLVHPIRGRLpNMLLVSANLHTDAENINYVALDLTFKEATemq-pifAFEDSLISKI-----DKLLLDLENLFDD 151
WP_038637856  77 TRGSAELIHPVFGSMtGMQCIEYQASHEAENVDYCVVEVVFIQGGln---lpFFGSDFPLSKa----DIIFNQAQSALEK 149
WP_061552899  77 KRDAGDLIHPIFGSMpNMQVKVYQVNHEAENVDACTLDIQFIQSKtg---npFFVTGYPTSQa----DAIFNKIQGMIDN 149
WP_087446338  77 QPGPGEFIHPVFGSIkTAQAIRSSVHHEADNVDQVSVSLEFIESTps---npFFDRSLPSQKa----DAIGQHGDAATAS 149
YP_237659    147 ALRRYRSVM-------------------ATVDAVRINIQALRSALSGVFATI----QRQFT-----PFMTIYSDVTalvh 198
NP_274140    152 AIGFVDAVLav----------------dAGVSALWGSALGIWSAASGTFGAV----RRLFD--------------L---- 193
WP_011416471 151 LREDLLGTIpvtdaavltqildaastmlSHVQGFSADLRNVVGAVETLLGTAeatvADVTS-----PVDSLQSTLT---- 221
WP_012341508 152 VLAFFAQIMev----------------vAFAMNVKSRLLGAFGALQGCFEQL----CGLFDmgktfFSLPSTFGAM---- 207
WP_013028381 150 ASEAAAKLIer----------------lQA-YSPLAPLDTLREAMTGPLLYG----MDFIN---------TLLSGM---- 195
YP_011934    153 SGRSFARWLesta-----------------kgySLAERVCVLDTLHQGLDDYd-------------ATHGALRASV---- 198
WP_006248664 152 GLRFWDSVG---------------------VFDLKSRLLGLWGALFASFEAV----RNLFDldkkkYSIASSTSQR---- 202
WP_038637856 150 AQTAIDNILsp----------------lRTAKKWMKKAKSLATTTLNMVTVL----KGELT--------GFVSTTS---- 197
WP_061552899 150 ANTLIDNALkp----------------lRTARSLMSKAKSLATAALNMVTVF----KSEVT--------GFISSTT---- 197
WP_087446338 150 AISEIGNVVdr----------------lHA-ANPLAALDTLRQAMTGPLLAG----MSQVQ--------GVLLSGM---- 196
YP_237659    199 SLVNAP--------------LTVSTLFSTFFA----SFDGDSRrarr-----angTSSig--------gASTGAGSGSST 247
NP_274140    194 DKIAFPdrggysaaafkngsAKLFADISVMVDt---GIRREAGladnam-hhagwSPrqrfdgaaavadraaaip----- 264
WP_011416471 222 YDLTIP--------------GRITGGLAAALEktarLCDSLRN------------YPA-----------RYVQSLDLAMK 264
WP_012341508 208 DFKAKS--------------SHTAKAITHIIEq---GLTQVA----------------------------------QRSD 236
WP_013028381 196 DVLAYP--------------RAWGNDISALVN----GALDVR----------------------------------LWGD 223
YP_011934    199 SYLDFP--------------TAYLADLDAAQDm---AAGPFRPvqgfg--nwqrlSQTfqgrsltggrgRAYPVGTSAYA 259
WP_006248664 203 TYLRDG--------------SGALNQLKEMVDs---GIQGRA----------------------------------DLTT 231
WP_038637856 198 DFVNYP--------------KAFMNDLQSALSl---TSLQSKSsvsnnpgsysqsSDV------------------SGTA 242
WP_061552899 198 DFINYP--------------AAFFSDLQSTLSl---KSASSQSsagksvgaystaTPTsttst--diasQVALQTYAATP 258
WP_087446338 197 DVLAYP--------------RAWGNDVSALVG----GVLDAQ----------------------------------DFTT 224
YP_237659    248 GGgsgngsasgsngtaassaaa-rsgsnggvssvetvdyrsviSEATQQAEAVsginlvsqssgldtgvtaqaaANLVQD 326
NP_274140    265 --------------------------dnlltgrfsdglqnrlnRLTAKQVQPV---------------------AQAVRL 297
WP_011416471 265 DLedsfdnp----------------------------agslsgSAETDAGSVM---------------------ASHLRI 295
WP_012341508 237 LTtkakfdetirtvkqiqaipqnllsgknmnlsqqqgiksltmSLSTESIEPV---------------------HLLMQL 295
WP_013028381 224 QLeadwasiqsdlhafsif--------ssppavapaqvtsttlPSETQAVAAI---------------------ALTVQV 274
YP_011934    260 GAvltgpasglaepspvvp-------gdeaprpgrpapvadlsSAQGAATAHA---------------------AAHAEV 311
WP_006248664 232 LSfksqllnitdaidntqa-------ivskvardegfnrsktvKLLGSDVVEL---------------------GIMLDL 283
WP_038637856 243 GIvmadwkngrnnlqdvaal------pqqivtgqktvavtvpaGSSTSDITEL---------------------VTAVKI 295
WP_061552899 259 GLimsdwsavyaqaksvasl------pvdlvtgekeapvampsRTTTADIAEL---------------------ITLTSL 311
WP_087446338 225 NVsaawasvqsnltlfdvf--------sappasvpaqvnasavPTEQQAVAAA---------------------AVTVKI 275
YP_237659    327 ALLVKVAKIVASMPVATTVTpltvvpsldqqvtqalqrvDVPVADDV----IELRDTLSSAIWEASLKA----------- 391
NP_274140    298 LSTSSLLSVATALIEAHG---------------------EEMTAPDLievnRAMRRRMQAEIAALRAVQtaaaesggl-- 354
WP_011416471 296 ACAQRMALETAQVFEEDQTAfsdpd---------daddyEVLTLPELeqtlAVARRRLDEAVDAARE------------- 353
WP_012341508 296 TCTATLIHLATGFIED-----------------------ETLLPQEIdyitTLIRTHIVSTLQLLRHQAqkeqansalns 352
WP_013028381 275 NTAVGLANAASFVLASESVT-------------------PTLQPDEIeaisNTARTSIQNAIEQARITYgi--------- 326
YP_011934    312 AQTALLAGEAATLLEAETET-------------------PTLTPHEVeavvGNVRDRLQDAMDASRAVLpp--------- 363
WP_006248664 284 IATTKLTKVLTELVEERE---------------------EELLIGDLelinQIVREHWLNIINKLREQQkntqkgvps-- 340
WP_038637856 296 QVAIQLALDASDILSDSSIS-------------------DILSPVDIeqitNDTRTAIQTAIDQTRDTFaadtqnvsa-- 354
WP_061552899 312 AVTIELTEQASAILSEDTLT-------------------AYMTPDDVetivNATRQSIQDTIDQHRTLYapalstiss-- 370
WP_087446338 276 NSATGLASAAGMLLSTESAT-------------------PTLSPLEItaiaNAVRTSIESAIVDVRAIYpl--------- 327
YP_237659    392 ----------DPEHYLVLNTLRQALIRHLNAVAASGVRLVDLKVSEPLPALVLAYRRFGDASRAQEMVQRN-RLAHPGFV 460
NP_274140    355 --tanavyteAYQTAESLRAAAGRLNALVAAVINQKPPLIVRQAPIDGTIHQIAHEFYGDIARAAELVRLNpHIHHPAFI 432
WP_011416471 354 --------------MGSLKEMAKALLEHVNAVRLEREKMKAVLLDNPLPLHLVCLRYGLPCKDAERLLKVNrGIRNPNFA 419
WP_012341508 353 tapntgvytaTQQIAERLRTLSHHFTQLAISAINRKPPLTVRVVPFNGTIQQIAHAFYGDYRRSDELLRLNpQVRFPNFI 432
WP_013028381 327 --------eqSRTITEPLKGQGLAVQEAARAVIAARPPLIQRAADAPGNMRLLAHLWYGDNTRAPELYRLN-GARSP-FV 396
YP_011934    364 --------heSHPVVEALRDAALAVQQLGALVLAARPPLVRYAVPWPCNLHLLAHRLYGDHRRAAELARLNpALRNPNFI 435
WP_006248664 341 -dktkviyetAEKLINNIRNVAHQFTALVLAVINKKPPLTVRMVMDSGTIHKVAHAFYGDYERADELLRLNpHIRQPNFI 419
WP_038637856 355 --getpggvtWQPVVESLKDIALTVQELGAAVITSRPPLTTRVILSDTNLHLLAHLWYEDYTRAAELLRLNpTLRNPNNI 432
WP_061552899 371 --seqplgleYEPVISALKDIALSLQTLGDAVINARPPLTKRTVNRVANLHLIAYEWYGDFSRADELQRLNpKLRDPNNL 448
WP_087446338 328 --------eqSRAITEPLKDQALAIQDAARAIIEIRPPLIVRVMNAPGNFRLIAHRLYGDHTRAPELFRLN-NIRLPNFI 398
YP_237659    461 PPG-TLKIAQE 470
NP_274140    433 KRGtLVNSYAK 443
WP_011416471 420 SGEvLVYVR-- 428
WP_012341508 433 AQGeLLNSYVN 443
WP_013028381 397 NTGdSVNAYAR 407
YP_011934    436 AQGqELLIHAQ 446
WP_006248664 420 ERGtLLNCYWE 430
WP_038637856 433 KAGdVLNAYSR 443
WP_061552899 449 KPGdIINAYSE 459
WP_087446338 399 QQGdKLNAYAS 409
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