Conserved Protein Domain Family
RteC

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pfam09357: RteC 
RteC protein
Human colonic Bacteroides species harbor a family of large conjugative transposons, called tetracycline resistance (Tcr) elements. Activities of these elements are enhanced by pregrowth of bacteria in medium containing tetracycline, indicating that at least some Tcr element genes are regulated by tetracycline. An insertional disruption in the rteC gene abolished self-transfer of the Tcr element to Bacteroides recipients, indicating that the gene was essential for self-transfer.
Statistics
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PSSM-Id: 430555
Aligned: 49 rows
Threshold Bit Score: 217.817
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EHQ26180        63 YFYKFEKPEYYALKIYHVALYTLLSQRPAGPPDILRKFYLEELEFILRYFNQHAFYYEYYRSGFTEMDEALFIPG-AVMA 141
jgi:Sph21_0253  62 aFFKTKKPTFISQVLYYSARQRIELTKPEGTADQLKKYYRYRLKGIEKFYRDNRELHSYHRSGADHLDRLLFMRSsTEPP 141
EHQ25479        58 HFFKHIKPKFFALRIYYLEWYGIVTSIPAGDKEVLKAAYNEELKVIQRFFRLIAFYYQYYGLGATELDSLLFVRG-VEVQ 136
EHQ24676        62 NFFKYTKPSFYQWQIYYTELYTIETGFPFGNADKQLDYLAQELHYIERFFQQYAFLYQYYKLDADELDNLYFIRG-EEIQ 140
EHQ27517        62 HFFKFTKPQFYAHYIFEVALFNLRSGLPGGDVEQLRAHYLDELRFIQRELRQHAFLYQYYRLGADDLDELYFVRG-VEVQ 140
EHQ29702        77 sFFKVTKPRFFSLQILETELYHLENCRKAVTLDELRSYYGDELKSIGRFFNQYAFQYEYYRMKADELDGLCFVRG-AALQ 155
jgi:Solca_0201  63 EFFKEIKPLFLKELIYFIEVFHLEVSKPIGSKDAQKTYFLQELDRIKLFFDRNNLLYTYYRMNKSHMDEVFFLRKgSRIP 142
WP_015265200    60 YFFKQVKPRFVSEQIYYGELYYMHSTIPIEPKEIA-QHFKRQLAFIRSYFQRHHFLYTYFRLDRNDLDEYLFRRNaPKVP 138 Echinicola vi...
jgi:Echvi_1952  60 YFFKKAKPRIVAEQLYYGELYYIHSTLPVEKREVL-DHYRNQLSFIRSYFQRHHFLYTYYRLDRSDLDEYLFKRNaPKAP 138
WP_014771728    62 sFFKLINPLLLKEAFYYAELFAVESNKPLGSNKKIRSYYSKAIRRIVKMLGKHKHLYNYVNLNESKFDHFYFLRNsENNL 141 Belliella bal...
EHQ26180       142 SPLLHDVPELDPDYSTNGDYLFSKFIAYEMLQEYILNELSALDCPvpgvgngimgATGMPAIAGKKWFEWTGELINVVEL 221
jgi:Sph21_0253 142 SWLCPVRIDYDERFSTPADYLIGKILSNERMTTYLRKLIDGKD--------------NVTDTEAGNDMVWTGESINLLET 207
EHQ25479       137 SVLIPEVPELDPEFATSCDYLFSKIRAFEQLQEFVLTRIRELDPAsi-------pPEVPTKRQPSEKLVWTGDKVNLVEI 209
EHQ24676       141 SVLLPAVPEVNPGFATSGDYLFSKFMAFDKLKDWVIEKMLYLKQNp---------ANPLQLNNEPDDMKWTGDTINLAEI 211
EHQ27517       141 SVLIPEVPELDKTFSTSGDYLFAKFKAFEMLQEHIAHALANIGKPe--------rTVYLRPGGRRQPLKWTGEQINAVEL 212
EHQ29702       156 SMLVTDLPDNDPEFTTAWDYLFAKFRALEMLRDHILHLLEGLNGQga-------dLGFIRPGRKAVPLKWTGDTIHAVEL 228
jgi:Solca_0201 143 L-LPEYSLDMDSNFSTVYSFKLAKVQAFEQLKEFINHSLNSLDAV-----------EQQPVKQKESLSTWTDSKAALIEL 210
WP_015265200   139 FLPDKPFIQRDAPFSTLGSYRFSRFKAYSRLKEHLHQQIRTLKNP--------------ETATGKARLKWTAPKVALIEL 204 Echinicola vi...
jgi:Echvi_1952 139 FLAETIAIQKDSRFSTHGSYRFARFKAFTRLKEYLLGKIHHLQNP--------------APAPEKKRLKWTAPKVALIEL 204
WP_014771728   142 KQPTGELLYMDTKYVTLQSYNLGKIYAWIQVVEQLQEDILLLDGQ------------QGISTSVKQGLTWTAPKVQLIEL 209 Belliella bal...
EHQ26180       222 GYGIYLSKQLNDGKATLAEIFRWLNESFGLKIVNPANKLAEIKRRKRiSRTHFFDFLQAAFIAYLDEDD 290
jgi:Sph21_0253 208 AYGWYCTGQINKGQAGIGEIVRKLETLFNVKIGRPYRRFAEIKQRKRlSRTKYIDEMGKAIIQKLDDED 276
EHQ25479       210 IYGLFFTGQFNNGNADIALIIRFMEEHFQVDLSRTYRDFMDIRNRKTtAITRFLEQMREAILAHIDDal 278
EHQ24676       212 GIGIYHTKQLNNGTASLSDIFRWLEEKFRVKIGVPSKRLSELRRRKRlSRTRYLDEMKENVILKLDKDD 280
EHQ27517       213 GYGLWVSEQLNGGEAALADIMYWLSESLDVDLSKHTTRFEEIKERKIlSPTRFFDGVRESVRRYIDDln 281
EHQ29702       229 GYSIWVSDQVNGGDAELADVMHWLSTTLDVDLSRYTRLFVEIKARKIlSKTKFLDLMKDAVMRYMNQGD 297
jgi:Solca_0201 211 AYALQSGGCVNFGKTDVKHIITNLERMFNIQLGNFYRVYQGMRIRKK-NRTIFLDNLKERLEKRMDDAD 278
WP_015265200   205 TYALKAAGVFNNGQATIRDIATVVEKVFQQDMSQYYRTFQEIRIRKS-GRTHFLKRLTHALEKWMDNTD 272 Echinicola vietnamensis
jgi:Echvi_1952 205 TYALKAAGVFNNGQATIRDIATVVEQIFQQDMSQYYRTFQEIRIRKS-GRTYFLNRLTQALERWMDNTD 272
WP_014771728   210 IYALKASGVFNNGNADIKQIANALGCLFDKKLTDYYRTFQEIRGRKK-SRTVFLDIMQERLVKWMEEge 277 Belliella baltica
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