Conserved Protein Domain Family
BofA

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pfam07441: BofA (this model, PSSM-Id:400013 is obsolete and has been replaced by 462165)
SigmaK-factor processing regulatory protein BofA
This family contains the sigmaK-factor processing regulatory protein BofA (Bypass-of-forespore protein A) (approximately 80 residues long). During sporulation in Bacillus subtilis, transcription is controlled in the developing sporangium by a cascade of sporulation-specific transcription factors (sigma factors). Following engulfment, processing of sigmaK is inhibited by BofA. It has been suggested that this effect is exerted by alteration of the level of the SpoIVFA protein.
Statistics
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PSSM-Id: 400013
Aligned: 128 rows
Threshold Bit Score: 28.1674
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDA50869      11 VLAVIFIIFKIFNLSIKIFFKLLINALIGAALLFVFNFVfAGLMNLSffyINITWLTALITGIFGVPGVVVLLIIG 86  Clostridium sp. CAG...
CCY92751      10 GIFGFIIIISMF-RTKKFLLSLFMTALQGIASLIAANFI-GGFFGVH---LSVNAFSLGVCGLGGLPGTVMLLITD 80  Eubacterium sp. CAG...
CDA89070       9 VCVVLLIPIITMFKKGSFLKCIFLSAFQGLAALLAVNSL-GLLTGVS---LAVNWYTILACVCLGIPASISMLVLN 80  Ruminococcus sp. CA...
CDC12874       9 AVICAASVLWWMIKSEKGASCFAVSALQGLAAVFAVNLA-GLVTGIT---LAVNWYTLGTAVLLGLPGVITALGLN 80  Clostridium sp. CAG...
WP_022264812  12 GVFLALVAIRKIMKSKHPIRSTLLGLLLGPACMLVINII-SIFTSVS---IPISPLSLGISSTLGIPGVTAMLLLQ 83  Clostridiales
CDB23373      12 IIFLLLFSVQIIIKAKNPLKKTFFSMLKGVATLAAVNAL-GAFTGVT---LPVSLLSLAIAAVIGMPGVTAMLIFN 83  Clostridium sp. CAG...
CDC02923      12 GAFLLFAFAHYISKSRHPFKRSLLSMAIGLLTLLAVNLT-GSFTGVY---LPVSLVSVCCAAFGGVPGVTLMLGLN 83  Eubacterium sp. CAG...
CDC82604      12 STVIFFAVIYAAKQSKKPLKRACGTVLTGLAALAAVNIS-GIFTGVY---IPVSCLSVCASAVGGIPAVTAMLIID 83  Clostridium sp. CAG...
CDF13963      31 IILIILAILHKLGKNKKPLLRAFGSMIIGLSALFLVNVT-SVITQVH---IPISMFTVGVSAGGGVPAVALLLFLN 102 Eubacterium sp. CAG...
WP_003531796  12 GIFCALLVLHVAAGSKKPFRRALGSALNGLVALVLVNIT-GGFTGVT---LPVSLLSLGVSAGLGIPGVTMLLLLN 83  [Clostridium] leptum
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