1DM9


Conserved Protein Domain Family
HslR

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COG1188: HslR (this model, PSSM-Id:224109 is obsolete and has been replaced by 440801)
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Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain [Translation, ribosomal structure and biogenesis]
linked to 3D-structure
Statistics
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PSSM-Id: 224109
Aligned: 32 rows
Threshold Bit Score: 78.8815
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DM9_B     1 MKEK-----P-AVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITE- 73  Escherichia coli
586886     1 --------------MRLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAKASSDVKPGDELTVRFGQKLVTVQVNELKD- 65  Bacillus subtilis
15896457   1 --------------MRLDKYLKVSRIIKRRTVAKEACESGRVSINGKVAKPGTDVEEDDIIEIRYASKVFKAKVVNITN- 65  Clostridium acetobu...
15792021   1 --------------MRVDKFLNVVNITKRRAISEDMCKSGVVGINGVIVKASKEVKVDDIITLHFTEYTQKYKVLALPS- 65  Campylobacter jejuni
19703372   1 --------------MRLDKFLKVSRIIKRRPIAKLVVDGGKVKLDGKVVKAAAEVKVGQILEIEYYNKYFKFEILQVPLg 66  Fusobacterium nucle...
15671997   3 KGIFkqneiCyNQTMRLDKFLKVSRLIKRRPVAKEVADKGRIKINGKLAKSSSDVKFNDTIEIRFGNKIVEVRVAELKE- 81  Lactococcus lactis ...
15926183   1 --------------MRLDKYLKVSRLIKRRTLAKEVSDQGRITINGNVAKAGSDVKVEDVLTIRFGQKLVTVKVTALNE- 65  Staphylococcus aure...
17433225   1 --------------MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKD- 65  Streptococcus pneum...
15674257   1 ------mkrIvGEIMRLDKYLKVSRLIKRRSVAKEVADKGRIKVNGILAKSSTNIKLNDHIEISFGNKLLTVRVIEIKD- 73  Streptococcus pyoge...
15642996   1 --------------MRLDLFLKIS-VVKRRTIAQKLLKGQRVLVNGRPAKASYEVKDGDIVEVFLPTKKIILRVVGNGGy 65  Thermotoga maritima
1DM9_B    74 QRRPASEAALLYEETAESVEKREKMAlaR 102 Escherichia coli
586886    66 TTKKEEAANMYTILKEEKLGE-------- 86  Bacillus subtilis
15896457  66 HALKEDAKKMYEVISGEEI---------- 84  Clostridium acetobutylicum
15792021  66 TKSIPKNAQNEYVVKL------------- 81  Campylobacter jejuni
19703372  67 NVSKDKTSDLVKLIETKGLDIEINLDkdE 95  Fusobacterium nucleatum subsp. nucleatum ATCC 25586
15671997  82 FTRKEDADKMYEMISETRITEEVE----- 105 Lactococcus lactis subsp. lactis
15926183  66 HASKDNAKGMYEIIEERRLEEA------- 87  Staphylococcus aureus subsp. aureus N315
17433225  66 STKKEDAAGMYEIISETRVEENV------ 88  Streptococcus pneumoniae
15674257  74 STKKEDALKMYEIISETRITLNEEA---- 98  Streptococcus pyogenes M1 GAS
15642996  66 EILSEERVSKPF----------------- 77  Thermotoga maritima
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