1EEJ,1JZD,1T3B,1TJD,1V58


Conserved Protein Domain Family
DsbA_DsbC_DsbG

?
cd03020: DsbA_DsbC_DsbG 
Click on image for an interactive view with Cn3D
DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.
Statistics
?
PSSM-Id: 239318
Aligned: 69 rows
Threshold Bit Score: 103.936
Created: 5-Jan-2005
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 2 residues -Click on image for an interactive view with Cn3D
Feature 1:catalytic residues [active site]
Evidence:
  • Structure:1JZD_B; Escherichia coli DsbC-DsbDalpha complex; active site cysteine of DsbC directly interacts with C109 of DsbDalpha
  • Comment:CXXC motif
  • Comment:DsbC and DsbG are kept reduced in the oxidative environment of the periplasm by the thiol oxidoreductase, DsbDalpha
  • Comment:Active site cysteines are necessary for isomerase activity, but are not required for chaperone activity.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
1EEJ_A       14 IKSSDIQPAp---vAGMKTVLTN-----------------SGVLYITDDGKHIIQGPMYdvsgt---------------- 57  Escherichia coli
1JZD_B       18 IKSSDIQPAp---vAGMKTVLTN-----------------SGVLYITDDGKHIIQGPMYdvsgt---------------- 61  Escherichia coli
AAO59091    134 TPPPKPDLAk---rSAPAPIASEp---------------rQSAADVAPDDGWILPWEVRa-------------------- 175 Pseudomonas syri...
AAQ17649     88 NAAYAELPArk--tSFMRGLIYGag--------------lVLALLTAVTAGYILLKPDSdsplrvpvtesvtetaplhid 151 Escherichia coli
AAS76378    129 TTPEAVQTAg---ePRLLPPHLNhtvp----------lneGIQLPVPPKKDVQVPEKTLtsknpea-------------- 181 Salmonella enter...
NP_775061    73 NNIRKKLKQq----RGLNAVRRLsnfifwpvaalgfivsiNGALMNMHQPAQPLQANSYapapglqqpv----------- 137 Citrobacter freu...
YP_169698    49 YKVIKTFDTgihlqAYILEDKKDpt--------------kHSVTFTSEDGAVIVNGELLawdsnqnklts---------- 104 Francisella tula...
YP_190326    68 GAQLYRLKSe----HGLEAVFARsg-------------tqFRVFYLTPDHLAEIGGVMWdatghnitrdqvssipgaipt 130 Gluconobacter ox...
EAM27581    105 VAVLGLAVNm----AATRAVGGSp---------------aGGIGAAGAASMVPLPNNLGalqqpiar------------- 152 Burkholderia vie...
ZP_00422183  88 IKVLDFRKGp----GGLNVWSVErn-------------gvQTVLYTTADNKVLMSGVLWdaksgvnlsdaflk------- 143 Burkholderia vie...
Feature 1                                                                                       
1EEJ_A       58 ------------------------------------------apvnvTNKMLLKQLNALe--------kEMIVYKApq-- 85  Escherichia coli
1JZD_B       62 ------------------------------------------apvnvTNKMLLKQLNALe--------kEMIVYKApq-- 89  Escherichia coli
AAO59091    176 ----------------------------------------------tLPQKLHNAAERKl---------FTVDYSSg--- 197 Pseudomonas syri...
AAQ17649    152 keivrsvapsetkneivhpapqemqetsatpaitadkntlvaearrnLATVLKRNADRGm---------FTINLSTg--- 219 Escherichia coli
AAS76378    182 -----------------------------------------aaarhnLAAVLKRNADRGm---------FTVNLSSg--- 208 Salmonella enter...
NP_775061   138 --------------------------------------tapeqlqvqAAPEAPKKLADNdll----slkDAVTSGRftis 175 Citrobacter freu...
YP_169698   105 ------------------------------------lnniyanyftsSPQANNLYLNIKky-------aTYIQQGSdd-- 139 Francisella tula...
YP_190326   131 ---------------------------vqwnpsgsgpgsrpgaasatTAPPAVDPVERV----------KAVAFGLegq- 172 Gluconobacter ox...
EAM27581    153 ---------------------------------------pavaspaqLAQAMADGAKSGk---------YAVQFSKg--- 181 Burkholderia vie...
ZP_00422183 144 ---------------------------------psmiqsasaqaaesNGAPARAKAGAPstpiaavaalRGIKEGSga-- 188 Burkholderia vie...
Feature 1                       #  #                                                            
1EEJ_A       86 ----eKHVITVFTDITCGYCHKLHEQMad-ynALGITVRYLAFPRqgl--dsdAEKEMKAIWCAKd---KNKAFDDVMag 155 Escherichia coli
1JZD_B       90 ----eKHVITVFTDITCGYSHKLHEQMad-ynALGITVRYLAFPRqgl--dsdAEKEMKAIWCAKd---KNKAFDDVMag 159 Escherichia coli
AAO59091    198 ----hARTLYVFSDPGCPNCQRLESSLnt--lSDAFNVVVFPVPVigk---ekSIAAITPVLCLPpe-qRKAAWDRLFda 267 Pseudomonas syri...
AAQ17649    220 ----hERTLYAFLDPACINCRLLEPALkq--lAREFSVVIYPVSVigg---eaSTNRTAPLLCEPdaqkRATGWHQLYsa 290 Escherichia coli
AAS76378    209 ----hERTLYAFLDPACPNCRLLEPALkr--lASDFNVVIYPVSVigg---eeSTDRVAPLLCEKdaqkRAAGWHRLYsa 279 Salmonella enter...
NP_775061   176 lstghKHTLYVFSDPMCPHCRALEPRLqe--lSKRYNVEIFPVSVygd---lrSMVRAAPVLDTGkd-tRLKSWEDTInm 249 Citrobacter freu...
YP_169698   140 ----aPHKFYAIINPSCSYCNRLFDATqpainSGELAVRWIPLGAlr-----nSPEIVRSIFNSKd---PLEALIKYHkt 207 Francisella tula...
YP_190326   173 ---dtAPRVYMFIDPLCPFSTRAYAALkpavaSGRLQLAIVPVSIndhenkgaSTPAAQQMLSAKph-dMAALWNQIDdl 248 Gluconobacter ox...
EAM27581    182 ----nKGTLYVFSDPSCPHCQDLEPELdk--lAKDYTIYIFPVTVigg---eaSSHRTAKLMCAKpe-aRAALWKKIVqg 251 Burkholderia vie...
ZP_00422183 189 ----aEKTIYILFDPRCPHCQNVYRDTrn-fvKNGGSIKWIPTTVlgr--dqmGTAMVADILQSRn---PIEAMGRVEsg 258 Burkholderia vie...
Feature 1                                                                                       
1EEJ_A      156 ksv----------------------apasCDVDIA----DHYALGVQLGvSGTPAVVLSn---------GTLVPGyqp-- 198 Escherichia coli
1JZD_B      160 ksv----------------------apasCDVDIA----DHYALGVQLGvSGTPAVVLSn---------GTLVPGyqp-- 202 Escherichia coli
AAO59091    268 apegvnfgkpplkpasegvelkaaqpagtCDVAEKal-gINQTAYQAYRiPGTPWVISDd---------GRYVPQallr- 336 Pseudomonas syri...
AAQ17649    291 dggmaptg------------dapaapdekCLTAARaaidVNNQAFRQFGfGGTPWVLSDt---------GWHLPSgilk- 348 Escherichia coli
AAS76378    280 dngmmtps------------eettpadetCLKAARaaidVNNVAFRKFGfAGTPWVLSDt---------GWHLPTgilq- 337 Salmonella enter...
NP_775061   250 gyttmnp--------------kiddpktaPDTTGArlveENNMAFAKFGfIGTPSIVADs---------GDVIPVsvvk- 305 Citrobacter freu...
YP_169698   208 kty----------------------dqklTQQNEK----AENNLRLSSDiEGFPTIVYKtpqgalkisgGNKLPLtdati 261 Francisella tula...
YP_190326   249 ghav--------------------pghatSDTAGAsl-mLNLSAAHSIGlRGTPTFVWKdrn-----gtPHVEAGlp--- 299 Gluconobacter ox...
EAM27581    252 ddl----------------------pnaeCADGSDav-aRNDQMFRVMRfLGTPTIINAa---------GEQTPDsipn- 298 Burkholderia vie...
ZP_00422183 259 gfrqpgk-------------ieqstldaiRDNEEY----FWAAFDRNKG-AGTPGVPVAffqt--sdgaPQMVANldd-- 316 Burkholderia vie...
Feature 1                    
1EEJ_A      199 -----pkeMKEFL 206 Escherichia coli
1JZD_B      203 -----pkeMKEFL 210 Escherichia coli
AAO59091    337 ----dpirLKAFL 345 Pseudomonas syringae pv. tomato str. DC3000
AAQ17649    349 ----dattVSLFL 357 Escherichia coli
AAS76378    338 ----etgtLNLFL 346 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
NP_775061   306 ----ddarLQQAI 314 Citrobacter freundii
YP_169698   262 aakdninkINEFL 274 Francisella tularensis subsp. tularensis Schu 4
YP_190326   300 ------ddLDAFL 306 Gluconobacter oxydans 621H
EAM27581    299 ----tadaINQWM 307 Burkholderia vietnamiensis G4
ZP_00422183 317 -----relLNRIF 324 Burkholderia vietnamiensis G4

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap