Conserved Protein Domain Family
YgdH

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COG1611: YgdH (this model, PSSM-Id:224527 is obsolete and has been replaced by 441219)
Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Statistics
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PSSM-Id: 224527
Aligned: 56 rows
Threshold Bit Score: 97.7649
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15599310 133 YVFqlLRNARTLRPGVEPKIVVCWGGHSISSEEYKYTKRVGHELGLRS------LDVCTGCGPGVMKGPMKGATishakq 206 Pseudomonas aerugin...
15618401 466 PKHqaEQFAQSYFIGIHGSCLIAGDYDEFLRELLTGMHTLSQQFTIPEfppqtpLAILTGGGSGAMELANRVAT------ 539 Chlamydophila pneum...
2506712  131 LVFsiLRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRE------LNICTGCGPGAMEAPMKGAAvghaqq 204 Escherichia coli
2506712  131 LVFsiLRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRE------LNICTGCGPGAMEAPMKGAAvghaqq 204 Escherichia coli
2506712  131 LVFsiLRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRE------LNICTGCGPGAMEAPMKGAAvghaqq 204 Escherichia coli
15602340 131 LVFaiLRNAKALPIGEHPNLVVCWGGHSINQVEYQYCRAVGTELGHRE------LNIITGCGPGVMEAPMKGAAighanq 204 Pasteurella multocida
16766274 131 LVFsiLRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGTQLGLRE------LNICTGCGPGAMEAPMKGAAvghaqq 204 Salmonella typhimur...
15640915 133 LVFgiLRNAGALIPGATPNLVVCWGGHSINEVEYQYTREVGHELGLRE------LNICTGCGPGAMEGPMKGAAvghakq 206 Vibrio cholerae
15837074 127 AVFaqLRNARILQVSAEPNLVVCWGGHSISRNEYLYTKQVGYALGLRG------LDICTGCGPGAMKGPMKGATiahakq 200 Xylella fastidiosa ...
16121333 131 LVFsiLRNARALHIDEEPNMVVCWGGHSINETEYLYARKVGSQLGLRE------LNICTGCGPGAMEAPMKGAAvghaqq 204 Yersinia pestis
15599310 207 rIVGGRYLGLTEPGIIAAEAPNPIVNELVILPDIEKRLEAFVRVGHGVIIFPGGAGTAEEFLYLLGILMHPDNQDLPFPV 286 Pseudomonas aerugin...
15618401 540 -ELSILSCGNLISLDT----TNAYVEAKMSYAIPDLLERQADFHVDLAVFVIGGMGTDFELLLELISLKTGKKALVPVFL 614 Chlamydophila pneum...
2506712  205 rYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPL 284 Escherichia coli
2506712  205 rYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPL 284 Escherichia coli
2506712  205 rYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPL 284 Escherichia coli
15602340 205 rYKHSRFIGITEPSIIASEPPNPIVNELIIMPDIEKRLEAFVRMGHGIVIFPGGPGTFEELLYILGIKLAEENKGKTLPL 284 Pasteurella multocida
16766274 205 rYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKNQVLPL 284 Salmonella typhimur...
15640915 207 rYSEYRYLGLTEPSIIAAEPPNPIVNELVIMPDIEKRLEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPI 286 Vibrio cholerae
15837074 201 rRHDKRYIGISEPGIIAAESPNPIVNHLVIMPDIEKRLEAFVRLAHGIIVFPGGVGTTEEILYLLGLLLREENHGLPFPL 280 Xylella fastidiosa ...
16121333 205 hYKKGRFIGMTEPSIIAAEPPNPLVNELVIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPENSEQVLPL 284 Yersinia pestis
15599310 287 ILTGPRSAEAYLQQLH--EFVGATLGHAAQRHYRIVIDDPAEVAKQMAQGLKEvkqfrrERNDAFH 350 Pseudomonas aeruginosa PA01
15618401 615 IGPVDYWKSKITALYNsnHAVGTIRGSEWVHNCLFCLSSAKAGIAIFRRYLNHtlpigpEHPVPED 680 Chlamydophila pneumoniae CWL029
2506712  285 ILTGPKESADYFRVLD--EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLvkenrrDTGDAYS 348 Escherichia coli
2506712  285 ILTGPKESADYFRVLD--EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLvkenrrDTGDAYS 348 Escherichia coli
2506712  285 ILTGPKESADYFRVLD--EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLvkenrrDTGDAYS 348 Escherichia coli
15602340 285 ILTGPKESADYFATID--RFIGDTLGKEAQALYDIIIDDPVKVARKMSQTMHDvkmeryQTGDAYG 348 Pasteurella multocida
16766274 285 ILTGPKESADYFRVLD--EFITHTLGEAARRHYRIIIDDAAEVARLMKKAMPQvkenrrDTGDAYS 348 Salmonella typhimurium LT2
15640915 287 VLTGPKQSEAYFRSLD--KFITDTLGEAARKHYSIAIDNPAEAARIMSNAMPLvrqhrkDKEDAYS 350 Vibrio cholerae
15837074 281 ILTGPASAAPYFEQID--HFIRLTLGNQAASCYEIVIGDPVAVARKISDGIRQvrefrkERKDAYY 344 Xylella fastidiosa 9a5c
16121333 285 ILTGPKESADYFKVVD--EFIMNTLGDGARKYYQIIIDDPDEVARQMKKAMPLvkeyrrNTGDAYS 348 Yersinia pestis
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