Conserved Protein Domain Family
PRK09210

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PRK09210: PRK09210 
RNA polymerase sigma factor RpoD; Validated
Statistics
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PSSM-Id: 236413
Aligned: 177 rows
Threshold Bit Score: 632.791
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
51891726    1 MESNEAKM-----QNARELVKQLIAKGKRKGSLSYDEVADSL-QELELDAEQMEAIFDTLTEAGIKLQGDEPDEaeepvd 74 
253753963   4 KKDKKTEV-----TTFDVQVAEFIRNHKKQGSATDDEINDQLvIPFTLDADGIDDLLQRIQDAGISIVDKEGNPsara-- 76 
146319082   4 KKDKKTEV-----TTFDVQVAEFIRNHKKQGSATDDEINDQLvIPFTLDADGIDDLLQRIQDAGISIVDKEGNPsara-- 76 
146321288   4 KKDKKTEV-----TTFDVQVAEFIRNHKKQGSATDDEINDQLvIPFTLDADGIDDLLQRIQDAGISIVDKEGNPsara-- 76 
253752138   4 KKDKKTEV-----TTFDVQVAEFIRNHKKQGSATDDEINDQLvIPFTLDADGIDDLLQRIQDAGISIVDKEGNPsara-- 76 
253755898   4 KKDKKTEV-----TTFDVQVAEFIRNHKKQGSATDDEINDQLvIPFTLDADGIDDLLQRIQDAGISIVDKEGNPsara-- 76 
221231817   1 MATKQKEV-----TTFDVQVAEFIRNHKQKGTATDDEINASLvIPFTLDADGIEDLLQRIQDAGISITDNEGNPsarv-- 73 
116511352  70 RVEIKENGdtfnvKAYEKAVKGYITKRKPLGEALDEEIMDELsVKFGIVDDALEDLFKQIQDAGISIVDKDGNPsplal- 148
125623388  70 RVEIKENGdtfnvKAYEKAVKGYITKRKPLGEALDEEIMDELsVKFGIVDDALEDLFKQIQDAGISIVDKDGNPsplal- 148
15672535   70 RVEVKENGdtfnvKAYEKAVKSYITKRKPLGEALDEEIMDELsVKFGIVDDALEDLFKQIQDAGISIVDKDGNPsplal- 148
51891726   75 gdadvealdvvepppvddaepDDDAAAgeDDDL-SVPEGIAIDDPVRMYLKEIGRVPLLTAEEEIMYAERI---EKGDEE 150
253753963  77 ------------------mqvEEEPELs-DEEL-LGSTSAKVNDPVRMYLKEIGVVPLLTNEEEQELALAV---EAGDPE 133
146319082  77 ------------------mqvEEEPELs-DEEL-LGSTSAKVNDPVRMYLKEIGVVPLLTNEEEQELALAV---EAGDPE 133
146321288  77 ------------------mqvEEEPELs-DEEL-LGSTSAKVNDPVRMYLKEIGVVPLLTNEEEQELALAV---EAGDPE 133
253752138  77 ------------------mqvEEEPELs-DEEL-LGSTSAKVNDPVRMYLKEIGVVPLLTNEEEQELALAV---EAGDPE 133
253755898  77 ------------------mqvEEEPELs-DEEL-LGSTSAKVNDPVRMYLKEIGVVPLLTNEEEQELALAV---EAGDPE 133
221231817  74 ------------------lsnEEEPELs-DEDL-IGSTSAKVNDPVRMYLKEIGVVPLLTNEEEKELALAV---EAGDIE 130
116511352 149 -----------------vtdeIEKEEVs-DTAMdEIVTNVRIDDPVRMYLKEIGRYPLISLDEETKLAEAIiagGEGAEF 210
125623388 149 -----------------vtdeIEKEEVs-DTAMdEIVTNVRIDDPVRMYLKEIGRYPLISLDEETKLAEAIiagGEGAEF 210
15672535  149 -----------------vtdeIEKEEVs-DTAMdEIVTNVRIDDPVRMYLKEIGRYPLISLDEETKLAEAIiagGEGAEF 210
51891726  151 AKRKLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNLGLIKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPV 230
253753963 134 AKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPV 213
146319082 134 AKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPV 213
146321288 134 AKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPV 213
253752138 134 AKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPV 213
253755898 134 AKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPV 213
221231817 131 AKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPV 210
116511352 211 AKQMLAEANLRLVVSIAKRYSGRGMQFLDLIQEGNMGLMKAVDKFDHTKGFKFSTYATWWIRQAITRAIADQARTIRIPV 290
125623388 211 AKQMLAEANLRLVVSIAKRYSGRGMQFLDLIQEGNMGLMKAVDKFDHTKGFKFSTYATWWIRQAITRAIADQARTIRIPV 290
15672535  211 AKQMLAEANLRLVVSIAKRYSGRGMQFLDLIQEGNMGLMKAVDKFDHTKGFKFSTYATWWIRQAITRAIADQARTIRIPV 290
51891726  231 HMVETINKLIRVTRQLVQELGREPTPEEIAAVMDIPVERVREIQKIAQEPVSLETPIGEEEDSHLGDFIEDQDAPAPAEA 310
253753963 214 HMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDY 293
146319082 214 HMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDY 293
146321288 214 HMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDY 293
253752138 214 HMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDY 293
253755898 214 HMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDY 293
221231817 211 HMVETINKLVREQRNLLQELGQDPTPEQIAERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDY 290
116511352 291 HMVETINKLIRVQRNLLQELGRDPSPEEIGKELHMAPDKVREVLKIAQEPVSLETPIGEEDDSHLGDFIEDDVIESPVDY 370
125623388 291 HMVETINKLIRVQRNLLQELGRDPSPEEIGKELHMAPDKVREVLKIAQEPVSLETPIGEEDDSHLGDFIEDDVIESPVDY 370
15672535  291 HMVETINKLIRVQRNLLQELGRDPSPEEIGKELHMAPDKVREVLKIAQEPVSLETPIGEEDDSHLGDFIEDDVIESPVDY 370
51891726  311 ASFTLLKEQLEEVLESLTPREEKVLRLRFGLDDGRARTLEEVGQVFGVTRERIRQIEAKALRKLRHPSRSKKLKDYLE 388
253753963 294 TTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIE 371
146319082 294 TTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIE 371
146321288 294 TTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIE 371
253752138 294 TTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIE 371
253755898 294 TTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIE 371
221231817 291 TTRIVLREQLDEILDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRQPSRSKPLRDFIE 368
116511352 371 TNRILLREQLDEVMDTLTDREENVLRMRFGLDDGRMHTLEDVGKQFKVTRERIRQIEAKAIKKLRHPRRSKPLRDFM- 447
125623388 371 TNRILLREQLDEVMDTLTDREENVLRMRFGLDDGRMHTLEDVGKQFKVTRERIRQIEAKAIKKLRHPRRSKPLRDFM- 447
15672535  371 TNRILLREQLDEVMDTLTDREENVLRMRFGLDDGRMHTLEDVGKQFKVTRERIRQIEAKAIKKLRHPRRSKPLRDFM- 447
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